RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 CNPY4Q8N129 248 aa15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 PRPF38AQ8NAV1 312 aaKnown RBP15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 PACSIN1Q9BY11 444 aa15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 GDF3Q9NR23 364 aa15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 MEFVO15553 781 aaPredicted RBP15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 NR1D1P20393 614 aa15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 IBSPP21815 317 aaPredicted RBP15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 TXKP42681 527 aa15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 EHHADHQ08426 723 aa15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 KCNMA1Q12791 1236 aa15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 SWT1Q5T5J6 900 aaKnown RBP15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 RNF187Q5TA31 235 aaPredicted RBP15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 INTS5Q6P9B9 1019 aaKnown RBP15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 CACNA2D4Q7Z3S7 1137 aa15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 POTEDQ86YR6 584 aa15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 KLHL7Q8IXQ5 586 aa15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 NOX5Q96PH1 765 aa15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 CEP89Q96ST8 783 aa15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 MYCBPQ99417 103 aaPredicted RBP15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 CD248Q9HCU0 757 aa15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 STRCP1A6NGW2 1772 aa15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 KLRC1P26715 233 aa15.39■□□□□ 0.05
SCNN1A-215ENST00000540037 CFAP221Q4G0U5 840 aa15.39■□□□□ 0.05
SCNN1A-215ENST00000540037 CAVIN4Q5BKX8 364 aa15.39■□□□□ 0.05
SCNN1A-215ENST00000540037 IFT20Q8IY31 132 aa15.39■□□□□ 0.05
SCNN1A-215ENST00000540037 ZNF473Q8WTR7 871 aaKnown RBP15.39■□□□□ 0.05
SCNN1A-215ENST00000540037 TMED8Q6PL24 325 aaPredicted RBP15.39■□□□□ 0.05
SCNN1A-215ENST00000540037 SLC51AQ86UW1 340 aa15.39■□□□□ 0.05
SCNN1A-215ENST00000540037 UIMC1Q96RL1 719 aa15.39■□□□□ 0.05
SCNN1A-215ENST00000540037 JPH2Q9BR39 696 aaPredicted RBP15.39■□□□□ 0.05
SCNN1A-215ENST00000540037 EPN3Q9H201 632 aa15.39■□□□□ 0.05
SCNN1A-215ENST00000540037 VAT1LQ9HCJ6 419 aa15.39■□□□□ 0.05
SCNN1A-215ENST00000540037 BARHL2Q9NY43 387 aa15.39■□□□□ 0.05
SCNN1A-215ENST00000540037 STX8Q9UNK0 236 aa15.39■□□□□ 0.05
SCNN1A-215ENST00000540037 MYH1P12882 1939 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 KIAA0754O94854 1291 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 IFT88Q13099 833 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 PDXDC1Q6P996 788 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 KDM7AQ6ZMT4 941 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 SMIM5Q71RC9 77 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 MAATS1Q7Z4T9 603 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 DDX42Q86XP3 938 aaKnown RBP eCLIP15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 CCDC47Q96A33 483 aaKnown RBP15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 NUDT12Q9BQG2 462 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 CRNKL1Q9BZJ0 848 aaKnown RBP15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 PPANQ9NQ55 473 aaKnown RBP15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 SH3GLB2Q9NR46 395 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 BLOC1S4Q9NUP1 217 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 RAD51CO43502 376 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 CAMTA2O94983 1202 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 ADAMTS2O95450 1211 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 PTGISQ16647 500 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 MAN2A1Q16706 1144 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 SPRED3Q2MJR0 410 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 CNNM4Q6P4Q7 775 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 CELF1Q92879 486 aaKnown RBP15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 GJA10Q969M2 543 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 CCT8L2Q96SF2 557 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 TMEM260Q9NX78 707 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 PLAAQ9Y263 795 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 PJA2O43164 708 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 PPP1R37O75864 691 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 PCP11498 1178 aaKnown RBP15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 CRKLP46109 303 aaKnown RBP15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 GRB10Q13322 594 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 CEP85LQ5SZL2 805 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 B4GALNT4Q76KP1 1039 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 BIN2Q9UBW5 565 aaPredicted RBP15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 MINPP1Q9UNW1 487 aa15.38■□□□□ 0.05
SCNN1A-215ENST00000540037 E7EVH7 732 aa15.37■□□□□ 0.05
SCNN1A-215ENST00000540037 TNFRSF8P28908 595 aa15.37■□□□□ 0.05
SCNN1A-215ENST00000540037 NAPAP54920 295 aa15.37■□□□□ 0.05
SCNN1A-215ENST00000540037 ERFEQ4G0M1 354 aa15.37■□□□□ 0.05
SCNN1A-215ENST00000540037 LRRC55Q6ZSA7 311 aa15.37■□□□□ 0.05
SCNN1A-215ENST00000540037 KCNK18Q7Z418 384 aa15.37■□□□□ 0.05
SCNN1A-215ENST00000540037 MYCBPAPQ8TBZ2 947 aa15.37■□□□□ 0.05
SCNN1A-215ENST00000540037 BTG4Q9NY30 223 aa15.37■□□□□ 0.05
SCNN1A-215ENST00000540037 FAM170AA1A519 330 aa15.37■□□□□ 0.05
SCNN1A-215ENST00000540037 POTEMA6NI47 508 aa15.37■□□□□ 0.05
SCNN1A-215ENST00000540037 NOL4O94818 638 aa15.37■□□□□ 0.05
SCNN1A-215ENST00000540037 GRM4Q14833 912 aa15.37■□□□□ 0.05
SCNN1A-215ENST00000540037 NLRP14Q86W24 1093 aa15.37■□□□□ 0.05
SCNN1A-215ENST00000540037 TBC1D5Q92609 795 aa15.37■□□□□ 0.05
SCNN1A-215ENST00000540037 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.37■□□□□ 0.05
SCNN1A-215ENST00000540037 FGFBP2Q9BYJ0 223 aa15.37■□□□□ 0.05
SCNN1A-215ENST00000540037 TBC1D7Q9P0N9 293 aa15.37■□□□□ 0.05
SCNN1A-215ENST00000540037 PRPHP41219 470 aa15.36■□□□□ 0.05
SCNN1A-215ENST00000540037 PAK2Q13177 524 aa15.36■□□□□ 0.05
SCNN1A-215ENST00000540037 CCDC24Q8N4L8 307 aa15.36■□□□□ 0.05
SCNN1A-215ENST00000540037 TBCKQ8TEA7 893 aa15.36■□□□□ 0.05
SCNN1A-215ENST00000540037 RUBCNQ92622 972 aa15.36■□□□□ 0.05
SCNN1A-215ENST00000540037 ATP6V1G3Q96LB4 118 aa15.36■□□□□ 0.05
SCNN1A-215ENST00000540037 A0A087X0T9 212 aa15.36■□□□□ 0.05
SCNN1A-215ENST00000540037 SMCO2A6NFE2 343 aa15.36■□□□□ 0.05
SCNN1A-215ENST00000540037 FAM228BP0C875 321 aa15.36■□□□□ 0.05
SCNN1A-215ENST00000540037 MDH1P40925 334 aaKnown RBP15.36■□□□□ 0.05
SCNN1A-215ENST00000540037 POLR2FP61218 127 aaKnown RBP15.36■□□□□ 0.05
SCNN1A-215ENST00000540037 ITGB3BPQ13352 177 aaPredicted RBP15.36■□□□□ 0.05
SCNN1A-215ENST00000540037 SV2BQ7L1I2 683 aa15.36■□□□□ 0.05
SCNN1A-215ENST00000540037 CCDC91Q7Z6B0 441 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms