RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 KPNA6O60684 536 aa19.42■□□□□ 0.7
DDB1-215ENST00000539712 CDC45O75419 566 aa19.42■□□□□ 0.7
DDB1-215ENST00000539712 GH1P01241 217 aa19.42■□□□□ 0.7
DDB1-215ENST00000539712 POLR2MP0CAP2 368 aa19.42■□□□□ 0.7
DDB1-215ENST00000539712 SMAD3P84022 425 aaKnown RBP19.42■□□□□ 0.7
DDB1-215ENST00000539712 TRAF1Q13077 416 aa19.42■□□□□ 0.7
DDB1-215ENST00000539712 PGM5Q15124 567 aa19.42■□□□□ 0.7
DDB1-215ENST00000539712 ADCK5Q3MIX3 580 aa19.42■□□□□ 0.7
DDB1-215ENST00000539712 SGMS1Q86VZ5 419 aa19.42■□□□□ 0.7
DDB1-215ENST00000539712 CMTR1Q8N1G2 835 aaKnown RBP19.42■□□□□ 0.7
DDB1-215ENST00000539712 CTCFLQ8NI51 663 aaPredicted RBP19.42■□□□□ 0.7
DDB1-215ENST00000539712 KAT2BQ92831 832 aa19.42■□□□□ 0.7
DDB1-215ENST00000539712 EMID1Q96A84 441 aaPredicted RBP19.42■□□□□ 0.7
DDB1-215ENST00000539712 RNPC3Q96LT9 517 aaKnown RBP19.42■□□□□ 0.7
DDB1-215ENST00000539712 WNT8AQ9H1J5 351 aa19.42■□□□□ 0.7
DDB1-215ENST00000539712 HIPK3Q9H422 1215 aa19.42■□□□□ 0.7
DDB1-215ENST00000539712 CHD7Q9P2D1 2997 aa19.41■□□□□ 0.7
DDB1-215ENST00000539712 MMP3P08254 477 aa19.41■□□□□ 0.7
DDB1-215ENST00000539712 ACRP10323 421 aa19.41■□□□□ 0.7
DDB1-215ENST00000539712 KIF5BP33176 963 aa19.41■□□□□ 0.7
DDB1-215ENST00000539712 PPIGQ13427 754 aaKnown RBP eCLIP19.41■□□□□ 0.7
DDB1-215ENST00000539712 BRDTQ58F21 947 aaPredicted RBP19.41■□□□□ 0.7
DDB1-215ENST00000539712 FCHSD1Q86WN1 690 aa19.41■□□□□ 0.7
DDB1-215ENST00000539712 RAB11FIP4Q86YS3 637 aa19.41■□□□□ 0.7
DDB1-215ENST00000539712 TMEM199Q8N511 208 aa19.41■□□□□ 0.7
DDB1-215ENST00000539712 CCDC136Q96JN2 1154 aa19.41■□□□□ 0.7
DDB1-215ENST00000539712 ZFP91Q96JP5 570 aaPredicted RBP19.41■□□□□ 0.7
DDB1-215ENST00000539712 GUCD1Q96NT3 240 aa19.41■□□□□ 0.7
DDB1-215ENST00000539712 LZTS2Q9BRK4 669 aa19.41■□□□□ 0.7
DDB1-215ENST00000539712 FRMPD4Q14CM0 1322 aa19.41■□□□□ 0.7
DDB1-215ENST00000539712 CCDC69A6NI79 296 aa19.4■□□□□ 0.7
DDB1-215ENST00000539712 CYP2C9P11712 490 aa19.4■□□□□ 0.7
DDB1-215ENST00000539712 MYCLP12524 364 aaPredicted RBP19.4■□□□□ 0.7
DDB1-215ENST00000539712 SP2Q02086 613 aa19.4■□□□□ 0.7
DDB1-215ENST00000539712 NFRKBQ6P4R8 1299 aa19.4■□□□□ 0.7
DDB1-215ENST00000539712 NFXL1Q6ZNB6 911 aa19.4■□□□□ 0.7
DDB1-215ENST00000539712 ZNF365Q70YC5 407 aa19.4■□□□□ 0.7
DDB1-215ENST00000539712 GPKOWQ92917 476 aaPredicted RBP eCLIP19.4■□□□□ 0.7
DDB1-215ENST00000539712 RRP36Q96EU6 259 aaKnown RBP19.4■□□□□ 0.7
DDB1-215ENST00000539712 NEK1Q96PY6 1258 aa19.4■□□□□ 0.7
DDB1-215ENST00000539712 CTAGE1Q96RT6 745 aa19.4■□□□□ 0.7
DDB1-215ENST00000539712 MEIS2O14770 477 aa19.39■□□□□ 0.69
DDB1-215ENST00000539712 CCL23P55773 120 aa19.39■□□□□ 0.69
DDB1-215ENST00000539712 MRPS9P82933 396 aaKnown RBP19.39■□□□□ 0.69
DDB1-215ENST00000539712 RNF20Q5VTR2 975 aa19.39■□□□□ 0.69
DDB1-215ENST00000539712 FANCBQ8NB91 859 aa19.39■□□□□ 0.69
DDB1-215ENST00000539712 KCNB2Q92953 911 aa19.39■□□□□ 0.69
DDB1-215ENST00000539712 TCEANC2Q96MN5 208 aa19.39■□□□□ 0.69
DDB1-215ENST00000539712 TTYH1Q9H313 450 aaPredicted RBP19.39■□□□□ 0.69
DDB1-215ENST00000539712 BCAS3Q9H6U6 928 aa19.39■□□□□ 0.69
DDB1-215ENST00000539712 IL23AQ9NPF7 189 aa19.39■□□□□ 0.69
DDB1-215ENST00000539712 BRPF3Q9ULD4 1205 aa19.39■□□□□ 0.69
DDB1-215ENST00000539712 STXBP5LQ9Y2K9 1186 aa19.39■□□□□ 0.69
DDB1-215ENST00000539712 SLC12A7Q9Y666 1083 aa19.39■□□□□ 0.69
DDB1-215ENST00000539712 MRVI1Q9Y6F6 885 aa19.39■□□□□ 0.69
DDB1-215ENST00000539712 PIK3CDO00329 1044 aa19.38■□□□□ 0.69
DDB1-215ENST00000539712 CALM1P0DP23 149 aa19.38■□□□□ 0.69
DDB1-215ENST00000539712 CALM2P0DP24 149 aa19.38■□□□□ 0.69
DDB1-215ENST00000539712 CALM3P0DP25 149 aa19.38■□□□□ 0.69
DDB1-215ENST00000539712 HOXD8P13378 290 aaPredicted RBP19.38■□□□□ 0.69
DDB1-215ENST00000539712 GNAQP50148 359 aa19.38■□□□□ 0.69
DDB1-215ENST00000539712 MYSM1Q5VVJ2 828 aa19.38■□□□□ 0.69
DDB1-215ENST00000539712 USP17L6PQ6QN14 398 aa19.38■□□□□ 0.69
DDB1-215ENST00000539712 TMTC3Q6ZXV5 915 aa19.38■□□□□ 0.69
DDB1-215ENST00000539712 DHX32Q7L7V1 743 aaKnown RBP19.38■□□□□ 0.69
DDB1-215ENST00000539712 FAM161BQ96MY7 647 aa19.38■□□□□ 0.69
DDB1-215ENST00000539712 SEMA6BQ9H3T3 888 aa19.38■□□□□ 0.69
DDB1-215ENST00000539712 hCG_1642624A0A1W2PR95 340 aa19.37■□□□□ 0.69
DDB1-215ENST00000539712 SUPT20HL2P0C7V6 817 aa19.37■□□□□ 0.69
DDB1-215ENST00000539712 CCND2P30279 289 aa19.37■□□□□ 0.69
DDB1-215ENST00000539712 PTPN11Q06124 597 aaPredicted RBP19.37■□□□□ 0.69
DDB1-215ENST00000539712 FUT2Q10981 343 aa19.37■□□□□ 0.69
DDB1-215ENST00000539712 LAMC2Q13753 1193 aa19.37■□□□□ 0.69
DDB1-215ENST00000539712 CELF3Q5SZQ8 465 aaKnown RBP19.37■□□□□ 0.69
DDB1-215ENST00000539712 APOA5Q6Q788 366 aa19.37■□□□□ 0.69
DDB1-215ENST00000539712 PPTC7Q8NI37 304 aa19.37■□□□□ 0.69
DDB1-215ENST00000539712 CXXC1Q9P0U4 656 aaPredicted RBP19.37■□□□□ 0.69
DDB1-215ENST00000539712 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.36■□□□□ 0.69
DDB1-215ENST00000539712 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.36■□□□□ 0.69
DDB1-215ENST00000539712 TGFB3P10600 412 aa19.36■□□□□ 0.69
DDB1-215ENST00000539712 UBA1P22314 1058 aaKnown RBP19.36■□□□□ 0.69
DDB1-215ENST00000539712 SEMA3FQ13275 785 aa19.36■□□□□ 0.69
DDB1-215ENST00000539712 DGKDQ16760 1214 aa19.36■□□□□ 0.69
DDB1-215ENST00000539712 HSDL1Q3SXM5 330 aa19.36■□□□□ 0.69
DDB1-215ENST00000539712 FAM47CQ5HY64 1035 aa19.36■□□□□ 0.69
DDB1-215ENST00000539712 SESTD1Q86VW0 696 aa19.36■□□□□ 0.69
DDB1-215ENST00000539712 MICU3Q86XE3 530 aa19.36■□□□□ 0.69
DDB1-215ENST00000539712 DHX37Q8IY37 1157 aaKnown RBP19.36■□□□□ 0.69
DDB1-215ENST00000539712 CCDC82Q8N4S0 544 aa19.36■□□□□ 0.69
DDB1-215ENST00000539712 HERVK_113Q902F9 699 aa19.36■□□□□ 0.69
DDB1-215ENST00000539712 SCLYQ96I15 445 aa19.36■□□□□ 0.69
DDB1-215ENST00000539712 MYH7BA7E2Y1 1941 aa19.35■□□□□ 0.69
DDB1-215ENST00000539712 GRXCR1A8MXD5 290 aa19.35■□□□□ 0.69
DDB1-215ENST00000539712 HAS3O00219 553 aa19.35■□□□□ 0.69
DDB1-215ENST00000539712 CASTP20810 708 aaKnown RBP19.35■□□□□ 0.69
DDB1-215ENST00000539712 CACNB1Q02641 598 aaPredicted RBP19.35■□□□□ 0.69
DDB1-215ENST00000539712 ZNF697Q5TEC3 545 aa19.35■□□□□ 0.69
DDB1-215ENST00000539712 GDF6Q6KF10 455 aaPredicted RBP19.35■□□□□ 0.69
DDB1-215ENST00000539712 PSRC1Q6PGN9 363 aaPredicted RBP19.35■□□□□ 0.69
DDB1-215ENST00000539712 KCNV1Q6PIU1 500 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms