RNA–Protein interactions for RNA: ENST00000539469.6

PDZRN4-203, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best) BASIC

Gene PDZRN4, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-203ENST00000539469 ATP2B2Q01814 1243 aa6.91□□□□□ -1.3
PDZRN4-203ENST00000539469 GUCY1B3Q02153 619 aa6.91□□□□□ -1.3
PDZRN4-203ENST00000539469 ICA1Q05084 483 aa6.91□□□□□ -1.3
PDZRN4-203ENST00000539469 KIAA1755Q5JYT7 1200 aa6.91□□□□□ -1.3
PDZRN4-203ENST00000539469 TMEM92Q6UXU6 159 aa6.91□□□□□ -1.3
PDZRN4-203ENST00000539469 TMEM179Q6ZVK1 233 aa6.91□□□□□ -1.3
PDZRN4-203ENST00000539469 SLAIN1Q8ND83 568 aa6.91□□□□□ -1.3
PDZRN4-203ENST00000539469 CCDC17Q96LX7 622 aa6.91□□□□□ -1.3
PDZRN4-203ENST00000539469 TIGD1Q96MW7 591 aa6.91□□□□□ -1.3
PDZRN4-203ENST00000539469 EGFL7Q9UHF1 273 aa6.91□□□□□ -1.3
PDZRN4-203ENST00000539469 FRMPD2Q68DX3 1309 aaPredicted RBP6.91□□□□□ -1.3
PDZRN4-203ENST00000539469 COL11A1P12107 1806 aaPredicted RBP6.91□□□□□ -1.3
PDZRN4-203ENST00000539469 C3orf80F5H4A9 247 aa6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 POLR3GO15318 223 aaPredicted RBP6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 CYTH3O43739 400 aa6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 PDHBP11177 359 aa6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 XRCC5P13010 732 aaKnown RBP6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 UBE2HP62256 183 aa6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 DGKZQ13574 1117 aa6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 SWI5Q1ZZU3 235 aa6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 CCDC178Q5BJE1 867 aa6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 LARP1BQ659C4 914 aaKnown RBP6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 MAMSTRQ6ZN01 415 aa6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 ACER1Q8TDN7 264 aa6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 ORC3Q9UBD5 711 aaPredicted RBP6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 RLFQ13129 1914 aa6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 LOC285556D6RIA3 1793 aa6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 CALM1P0DP23 149 aa6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 CALM2P0DP24 149 aa6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 CALM3P0DP25 149 aa6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 SNHG28P0DPA3 235 aa6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 ZSCAN22P10073 491 aaPredicted RBP6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 FMR1Q06787 632 aaKnown RBP eCLIP6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 MTMR2Q13614 643 aa6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 PKN1Q16512 942 aa6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 ANO6Q4KMQ2 910 aa6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 USP50Q70EL3 339 aaPredicted RBP6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 KRT222Q8N1A0 295 aa6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 ZKSCAN4Q969J2 545 aaPredicted RBP6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 HINFPQ9BQA5 517 aa6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 NYAP2Q9P242 653 aa6.9□□□□□ -1.3
PDZRN4-203ENST00000539469 STK36Q9NRP7 1315 aa6.9□□□□□ -1.31
PDZRN4-203ENST00000539469 SMCHD1A6NHR9 2005 aa6.9□□□□□ -1.31
PDZRN4-203ENST00000539469 CCDC66A2RUB6 948 aa6.9□□□□□ -1.31
PDZRN4-203ENST00000539469 ADAMTS3O15072 1205 aa6.9□□□□□ -1.31
PDZRN4-203ENST00000539469 LIG1P18858 919 aa6.9□□□□□ -1.31
PDZRN4-203ENST00000539469 PRKG1Q13976 671 aa6.9□□□□□ -1.31
PDZRN4-203ENST00000539469 TAF3Q5VWG9 929 aa6.9□□□□□ -1.31
PDZRN4-203ENST00000539469 CEP135Q66GS9 1140 aa6.9□□□□□ -1.31
PDZRN4-203ENST00000539469 TTBK2Q6IQ55 1244 aa6.9□□□□□ -1.31
PDZRN4-203ENST00000539469 FBXO38Q6PIJ6 1188 aa6.9□□□□□ -1.31
PDZRN4-203ENST00000539469 TAS1R3Q7RTX0 852 aa6.9□□□□□ -1.31
PDZRN4-203ENST00000539469 CTCFLQ8NI51 663 aaPredicted RBP6.9□□□□□ -1.31
PDZRN4-203ENST00000539469 ARMC5Q96C12 935 aa6.9□□□□□ -1.31
PDZRN4-203ENST00000539469 MS4A3Q96HJ5 214 aa6.9□□□□□ -1.31
PDZRN4-203ENST00000539469 NUP88Q99567 741 aaPredicted RBP6.9□□□□□ -1.31
PDZRN4-203ENST00000539469 RBM28Q9NW13 759 aaKnown RBP6.9□□□□□ -1.31
PDZRN4-203ENST00000539469 SMTNL1A8MU46 457 aa6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 DHX16O60231 1041 aaKnown RBP6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 F13A1P00488 732 aa6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 CCDC192P0DO97 292 aa6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 CHMP4BP1P59074 171 aa6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 SSRP1Q08945 709 aaKnown RBP6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 KCTD1Q719H9 257 aa6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 CACTINQ8WUQ7 758 aaKnown RBP6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 MKL1Q969V6 931 aa6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 DCPSQ96C86 337 aaKnown RBP6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 MAP3K14Q99558 947 aa6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 MAP3K20Q9NYL2 800 aaKnown RBP6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 ZNF112Q9UJU3 913 aa6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 PPP2R3BQ9Y5P8 575 aa6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 TRPM7Q96QT4 1865 aa6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 FAM221BA6H8Z2 402 aa6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 HMGB1P1B2RPK0 211 aaPredicted RBP6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 KIF28PB7ZC32 967 aa6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 CDKL5O76039 1030 aa6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 CEBPZQ03701 1054 aaKnown RBP6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 GABPB1Q06547 395 aaPredicted RBP6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 ZYXQ15942 572 aaKnown RBP6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 C10orf62Q5T681 223 aaPredicted RBP6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 MOB2Q70IA6 237 aa6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 KRT26Q7Z3Y9 468 aa6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 NEK11Q8NG66 645 aa6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 TPCN2Q8NHX9 752 aa6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 CDCA5Q96FF9 252 aa6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 ALG1Q9BT22 464 aa6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 DNAJC25Q9H1X3 360 aa6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 RRAGCQ9HB90 399 aa6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 CABP5Q9NP86 173 aa6.89□□□□□ -1.31
PDZRN4-203ENST00000539469 RBBP6Q7Z6E9 1792 aaKnown RBP6.88□□□□□ -1.31
PDZRN4-203ENST00000539469 TREHO43280 583 aa6.88□□□□□ -1.31
PDZRN4-203ENST00000539469 USP2O75604 605 aaPredicted RBP6.88□□□□□ -1.31
PDZRN4-203ENST00000539469 NDUFB10O96000 172 aa6.88□□□□□ -1.31
PDZRN4-203ENST00000539469 PARP1P09874 1014 aaKnown RBP6.88□□□□□ -1.31
PDZRN4-203ENST00000539469 HNRNPH2P55795 449 aaKnown RBP6.88□□□□□ -1.31
PDZRN4-203ENST00000539469 ZNF543Q08ER8 600 aa6.88□□□□□ -1.31
PDZRN4-203ENST00000539469 RESTQ13127 1097 aa6.88□□□□□ -1.31
PDZRN4-203ENST00000539469 NR1H3Q13133 447 aa6.88□□□□□ -1.31
PDZRN4-203ENST00000539469 JAMLQ86YT9 394 aa6.88□□□□□ -1.31
PDZRN4-203ENST00000539469 SPICE1Q8N0Z3 855 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms