RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 CCDC62Q6P9F0 684 aa18.08■□□□□ 0.49
RPAIN-206ENST00000539417 CCDC83Q8IWF9 413 aa18.08■□□□□ 0.49
RPAIN-206ENST00000539417 TRIM22Q8IYM9 498 aa18.08■□□□□ 0.49
RPAIN-206ENST00000539417 ZNF713Q8N859 430 aaPredicted RBP18.08■□□□□ 0.49
RPAIN-206ENST00000539417 KLHDC9Q8NEP7 349 aa18.08■□□□□ 0.49
RPAIN-206ENST00000539417 RASGRP4Q8TDF6 673 aa18.08■□□□□ 0.49
RPAIN-206ENST00000539417 ZMYND12Q9H0C1 365 aa18.08■□□□□ 0.49
RPAIN-206ENST00000539417 UPF3AQ9H1J1 476 aaKnown RBP18.08■□□□□ 0.49
RPAIN-206ENST00000539417 BCAS3Q9H6U6 928 aa18.08■□□□□ 0.49
RPAIN-206ENST00000539417 RTEL1Q9NZ71 1219 aa18.08■□□□□ 0.49
RPAIN-206ENST00000539417 PCDH10Q9P2E7 1040 aa18.08■□□□□ 0.49
RPAIN-206ENST00000539417 RBM27Q9P2N5 1060 aaKnown RBP18.08■□□□□ 0.49
RPAIN-206ENST00000539417 DNM1LO00429 736 aa18.07■□□□□ 0.48
RPAIN-206ENST00000539417 DEXIO95424 95 aa18.07■□□□□ 0.48
RPAIN-206ENST00000539417 MRPL12P52815 198 aaKnown RBP18.07■□□□□ 0.48
RPAIN-206ENST00000539417 SEMA3FQ13275 785 aa18.07■□□□□ 0.48
RPAIN-206ENST00000539417 NPY5RQ15761 445 aa18.07■□□□□ 0.48
RPAIN-206ENST00000539417 DUSP28Q4G0W2 176 aa18.07■□□□□ 0.48
RPAIN-206ENST00000539417 JAKMIP3Q5VZ66 844 aa18.07■□□□□ 0.48
RPAIN-206ENST00000539417 TLK2Q86UE8 772 aa18.07■□□□□ 0.48
RPAIN-206ENST00000539417 FERMT2Q96AC1 680 aa18.07■□□□□ 0.48
RPAIN-206ENST00000539417 C11orf49Q9H6J7 331 aa18.07■□□□□ 0.48
RPAIN-206ENST00000539417 ESYT2A0FGR8 921 aa18.07■□□□□ 0.48
RPAIN-206ENST00000539417 SORBS3O60504 671 aa18.07■□□□□ 0.48
RPAIN-206ENST00000539417 C6orf222P0C671 652 aaPredicted RBP18.07■□□□□ 0.48
RPAIN-206ENST00000539417 CCND2P30279 289 aa18.07■□□□□ 0.48
RPAIN-206ENST00000539417 SP2Q02086 613 aa18.07■□□□□ 0.48
RPAIN-206ENST00000539417 CPLX2Q6PUV4 134 aaKnown RBP18.07■□□□□ 0.48
RPAIN-206ENST00000539417 NECAB2Q7Z6G3 386 aa18.07■□□□□ 0.48
RPAIN-206ENST00000539417 ARRDC4Q8NCT1 418 aa18.07■□□□□ 0.48
RPAIN-206ENST00000539417 SCFD2Q8WU76 684 aa18.07■□□□□ 0.48
RPAIN-206ENST00000539417 MPHOSPH6Q99547 160 aaKnown RBP18.07■□□□□ 0.48
RPAIN-206ENST00000539417 ORC3Q9UBD5 711 aaPredicted RBP18.07■□□□□ 0.48
RPAIN-206ENST00000539417 KCNJ14Q9UNX9 436 aa18.07■□□□□ 0.48
RPAIN-206ENST00000539417 STK36Q9NRP7 1315 aa18.06■□□□□ 0.48
RPAIN-206ENST00000539417 B4DLN1 442 aa18.06■□□□□ 0.48
RPAIN-206ENST00000539417 TXNP10599 105 aaKnown RBP18.06■□□□□ 0.48
RPAIN-206ENST00000539417 KCNA10Q16322 511 aa18.06■□□□□ 0.48
RPAIN-206ENST00000539417 ANO3Q9BYT9 981 aa18.06■□□□□ 0.48
RPAIN-206ENST00000539417 SENP6Q9GZR1 1112 aaPredicted RBP18.06■□□□□ 0.48
RPAIN-206ENST00000539417 DDX41Q9UJV9 622 aaKnown RBP18.06■□□□□ 0.48
RPAIN-206ENST00000539417 SPDYE3A6NKU9 549 aa18.05■□□□□ 0.48
RPAIN-206ENST00000539417 EDIL3O43854 480 aa18.05■□□□□ 0.48
RPAIN-206ENST00000539417 CDKL5O76039 1030 aa18.05■□□□□ 0.48
RPAIN-206ENST00000539417 FOSBP53539 338 aa18.05■□□□□ 0.48
RPAIN-206ENST00000539417 NKX3-2P78367 333 aa18.05■□□□□ 0.48
RPAIN-206ENST00000539417 PCNX4Q63HM2 1172 aa18.05■□□□□ 0.48
RPAIN-206ENST00000539417 RNF180Q86T96 592 aa18.05■□□□□ 0.48
RPAIN-206ENST00000539417 CYP2W1Q8TAV3 490 aa18.05■□□□□ 0.48
RPAIN-206ENST00000539417 TELO2Q9Y4R8 837 aa18.05■□□□□ 0.48
RPAIN-206ENST00000539417 KBTBD13C9JR72 458 aa18.04■□□□□ 0.48
RPAIN-206ENST00000539417 ITGB5P18084 799 aa18.04■□□□□ 0.48
RPAIN-206ENST00000539417 ACLYP53396 1101 aa18.04■□□□□ 0.48
RPAIN-206ENST00000539417 ATN1P54259 1190 aaPredicted RBP18.04■□□□□ 0.48
RPAIN-206ENST00000539417 NLRP5P59047 1200 aa18.04■□□□□ 0.48
RPAIN-206ENST00000539417 ARHGAP1Q07960 439 aa18.04■□□□□ 0.48
RPAIN-206ENST00000539417 TTLL4Q14679 1199 aa18.04■□□□□ 0.48
RPAIN-206ENST00000539417 LRRC26Q2I0M4 334 aa18.04■□□□□ 0.48
RPAIN-206ENST00000539417 GNASQ5JWF2 1037 aa18.04■□□□□ 0.48
RPAIN-206ENST00000539417 OR6J1Q8NGC5 347 aa18.04■□□□□ 0.48
RPAIN-206ENST00000539417 INPP4AQ96PE3 977 aaPredicted RBP18.04■□□□□ 0.48
RPAIN-206ENST00000539417 C6orf50Q9HD87 102 aa18.04■□□□□ 0.48
RPAIN-206ENST00000539417 SH3GLB2Q9NR46 395 aa18.04■□□□□ 0.48
RPAIN-206ENST00000539417 PHF24Q9UPV7 400 aa18.04■□□□□ 0.48
RPAIN-206ENST00000539417 DOCK5Q9H7D0 1870 aa18.04■□□□□ 0.48
RPAIN-206ENST00000539417 A0A1W2PQ45 241 aaPredicted RBP18.03■□□□□ 0.48
RPAIN-206ENST00000539417 A0A1W2PQY0 241 aa18.03■□□□□ 0.48
RPAIN-206ENST00000539417 M0R2N6 131 aa18.03■□□□□ 0.48
RPAIN-206ENST00000539417 ASGR1P07306 291 aa18.03■□□□□ 0.48
RPAIN-206ENST00000539417 CAPN2P17655 700 aa18.03■□□□□ 0.48
RPAIN-206ENST00000539417 CST5P28325 142 aaPredicted RBP18.03■□□□□ 0.48
RPAIN-206ENST00000539417 FSCN1Q16658 493 aaKnown RBP18.03■□□□□ 0.48
RPAIN-206ENST00000539417 ZSCAN31Q96LW9 406 aaPredicted RBP18.03■□□□□ 0.48
RPAIN-206ENST00000539417 AP5M1Q9H0R1 490 aa18.03■□□□□ 0.48
RPAIN-206ENST00000539417 UBIAD1Q9Y5Z9 338 aa18.03■□□□□ 0.48
RPAIN-206ENST00000539417 MRVI1Q9Y6F6 885 aa18.03■□□□□ 0.48
RPAIN-206ENST00000539417 UBA1P22314 1058 aaKnown RBP18.02■□□□□ 0.48
RPAIN-206ENST00000539417 REXO1Q8N1G1 1221 aaKnown RBP18.02■□□□□ 0.48
RPAIN-206ENST00000539417 CCDC148Q8NFR7 591 aa18.02■□□□□ 0.48
RPAIN-206ENST00000539417 OXER1Q8TDS5 423 aa18.02■□□□□ 0.48
RPAIN-206ENST00000539417 CCDC12Q8WUD4 166 aaPredicted RBP18.02■□□□□ 0.48
RPAIN-206ENST00000539417 PPP1R13LQ8WUF5 828 aa18.02■□□□□ 0.48
RPAIN-206ENST00000539417 CRYGNQ8WXF5 182 aa18.02■□□□□ 0.48
RPAIN-206ENST00000539417 TMX3Q96JJ7 454 aa18.02■□□□□ 0.48
RPAIN-206ENST00000539417 ALG1Q9BT22 464 aa18.02■□□□□ 0.48
RPAIN-206ENST00000539417 PHF20Q9BVI0 1012 aa18.02■□□□□ 0.48
RPAIN-206ENST00000539417 Q9Y3F1 56 aa18.02■□□□□ 0.48
RPAIN-206ENST00000539417 MYH7BA7E2Y1 1941 aa18.02■□□□□ 0.47
RPAIN-206ENST00000539417 SPATA31C2B4DYI2 1134 aa18.01■□□□□ 0.47
RPAIN-206ENST00000539417 ST18O60284 1047 aa18.01■□□□□ 0.47
RPAIN-206ENST00000539417 ATP9AO75110 1047 aa18.01■□□□□ 0.47
RPAIN-206ENST00000539417 FOSP01100 380 aaPredicted RBP18.01■□□□□ 0.47
RPAIN-206ENST00000539417 GNA11P29992 359 aa18.01■□□□□ 0.47
RPAIN-206ENST00000539417 SREBF1P36956 1147 aa18.01■□□□□ 0.47
RPAIN-206ENST00000539417 AP3B2Q13367 1082 aa18.01■□□□□ 0.47
RPAIN-206ENST00000539417 CXCL17Q6UXB2 119 aa18.01■□□□□ 0.47
RPAIN-206ENST00000539417 AFG1LQ8WV93 481 aa18.01■□□□□ 0.47
RPAIN-206ENST00000539417 PCDHA4Q9UN74 947 aa18.01■□□□□ 0.47
RPAIN-206ENST00000539417 ICAM3P32942 547 aa18.01■□□□□ 0.47
RPAIN-206ENST00000539417 ARHGAP4P98171 946 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms