RNA–Protein interactions for RNA: ENST00000539021.1

PPME1-205, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 2

Gene PPME1, Length 4,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-205ENST00000539021 CCDC40Q4G0X9 1142 aa9.62□□□□□ -0.87
PPME1-205ENST00000539021 KLHDC7AQ5VTJ3 777 aa9.62□□□□□ -0.87
PPME1-205ENST00000539021 KCNV1Q6PIU1 500 aa9.62□□□□□ -0.87
PPME1-205ENST00000539021 CNPY4Q8N129 248 aa9.62□□□□□ -0.87
PPME1-205ENST00000539021 RNF10Q8N5U6 811 aaKnown RBP9.62□□□□□ -0.87
PPME1-205ENST00000539021 ATP8A2Q9NTI2 1148 aa9.62□□□□□ -0.87
PPME1-205ENST00000539021 ZNF233A6NK53 670 aa9.62□□□□□ -0.87
PPME1-205ENST00000539021 PALMO75781 387 aa9.62□□□□□ -0.87
PPME1-205ENST00000539021 TXKP42681 527 aa9.62□□□□□ -0.87
PPME1-205ENST00000539021 MECOMQ03112 1051 aa9.62□□□□□ -0.87
PPME1-205ENST00000539021 UBE4AQ14139 1066 aa9.62□□□□□ -0.87
PPME1-205ENST00000539021 SOGA3Q5TF21 947 aa9.62□□□□□ -0.87
PPME1-205ENST00000539021 RCSD1Q6JBY9 416 aa9.62□□□□□ -0.87
PPME1-205ENST00000539021 PDXDC1Q6P996 788 aa9.62□□□□□ -0.87
PPME1-205ENST00000539021 KLHL7Q8IXQ5 586 aa9.62□□□□□ -0.87
PPME1-205ENST00000539021 ZNF473Q8WTR7 871 aaKnown RBP9.62□□□□□ -0.87
PPME1-205ENST00000539021 ZNF804BA4D1E1 1349 aa9.62□□□□□ -0.87
PPME1-205ENST00000539021 FLT1P17948 1338 aa9.62□□□□□ -0.87
PPME1-205ENST00000539021 TOGARAM1Q9Y4F4 1720 aa9.62□□□□□ -0.87
PPME1-205ENST00000539021 TSPY3P0CV98 308 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 TSPY8P0CW00 308 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 CDR1P51861 262 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 TNNC1P63316 161 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 EHHADHQ08426 723 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 IFT88Q13099 833 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 KRT25Q7Z3Z0 450 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 PRPF38AQ8NAV1 312 aaKnown RBP9.61□□□□□ -0.87
PPME1-205ENST00000539021 PPANQ9NQ55 473 aaKnown RBP9.61□□□□□ -0.87
PPME1-205ENST00000539021 BARHL2Q9NY43 387 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 JAG2Q9Y219 1238 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 CICQ96RK0 1608 aaPredicted RBP9.61□□□□□ -0.87
PPME1-205ENST00000539021 G3V3G9 751 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 PJA2O43164 708 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 LCA5LO95447 670 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 GOLGA8HP0CJ92 632 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 SEC24CP53992 1094 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 ODF2Q5BJF6 829 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 DCAF8Q5TAQ9 597 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 SFMBT2Q5VUG0 894 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 CENPPQ6IPU0 288 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 NLRP14Q86W24 1093 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 WHAMMQ8TF30 809 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 NSUN4Q96CB9 384 aaKnown RBP9.61□□□□□ -0.87
PPME1-205ENST00000539021 ATP6V1G3Q96LB4 118 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 GDF3Q9NR23 364 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 PACSIN2Q9UNF0 486 aaPredicted RBP9.61□□□□□ -0.87
PPME1-205ENST00000539021 USP17L8P0C7I0 530 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 GRM4Q14833 912 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 PTGISQ16647 500 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 NEK8Q86SG6 692 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 IQCKQ8N0W5 287 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 ARFGAP2Q8N6H7 521 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 JPH2Q9BR39 696 aaPredicted RBP9.61□□□□□ -0.87
PPME1-205ENST00000539021 BCCIPQ9P287 314 aaKnown RBP eCLIP9.61□□□□□ -0.87
PPME1-205ENST00000539021 PLAAQ9Y263 795 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 HMGB1P1B2RPK0 211 aaPredicted RBP9.61□□□□□ -0.87
PPME1-205ENST00000539021 STXBP3O00186 592 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 ADAMTS2O95450 1211 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 EPS15P42566 896 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 DGKHQ86XP1 1220 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 DZIP1Q86YF9 867 aaKnown RBP9.61□□□□□ -0.87
PPME1-205ENST00000539021 ZNF384Q8TF68 577 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 CASKIN2Q8WXE0 1202 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 CCT8L2Q96SF2 557 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 C6orf50Q9HD87 102 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 DCCP43146 1447 aa9.61□□□□□ -0.87
PPME1-205ENST00000539021 ATXN2Q99700 1313 aaKnown RBP9.6□□□□□ -0.87
PPME1-205ENST00000539021 SSU72P8A0A1W2PR75 194 aa9.6□□□□□ -0.87
PPME1-205ENST00000539021 USP17L3A6NCW0 530 aa9.6□□□□□ -0.87
PPME1-205ENST00000539021 USP17L4A6NCW7 530 aa9.6□□□□□ -0.87
PPME1-205ENST00000539021 MDH1P40925 334 aaKnown RBP9.6□□□□□ -0.87
PPME1-205ENST00000539021 HDLBPQ00341 1268 aaKnown RBP9.6□□□□□ -0.87
PPME1-205ENST00000539021 RAPGEF1Q13905 1077 aa9.6□□□□□ -0.87
PPME1-205ENST00000539021 LRRC41Q15345 812 aa9.6□□□□□ -0.87
PPME1-205ENST00000539021 CCDC121Q6ZUS5 278 aa9.6□□□□□ -0.87
PPME1-205ENST00000539021 USP17L1Q7RTZ2 530 aa9.6□□□□□ -0.87
PPME1-205ENST00000539021 ZNF444Q8N0Y2 327 aaPredicted RBP9.6□□□□□ -0.87
PPME1-205ENST00000539021 DAGLBQ8NCG7 672 aa9.6□□□□□ -0.87
PPME1-205ENST00000539021 FAM84BQ96KN1 310 aaPredicted RBP9.6□□□□□ -0.87
PPME1-205ENST00000539021 VAT1LQ9HCJ6 419 aa9.6□□□□□ -0.87
PPME1-205ENST00000539021 COL1A1P02452 1464 aaPredicted RBP9.6□□□□□ -0.87
PPME1-205ENST00000539021 SMCO2A6NFE2 343 aa9.6□□□□□ -0.87
PPME1-205ENST00000539021 GCOM1H8Y6P7 765 aaPredicted RBP9.6□□□□□ -0.87
PPME1-205ENST00000539021 M0R2N6 131 aa9.6□□□□□ -0.87
PPME1-205ENST00000539021 TRAF5O00463 557 aa9.6□□□□□ -0.87
PPME1-205ENST00000539021 FSBPO95073 299 aa9.6□□□□□ -0.87
PPME1-205ENST00000539021 MYZAPP0CAP1 466 aa9.6□□□□□ -0.87
PPME1-205ENST00000539021 GNA11P29992 359 aa9.6□□□□□ -0.87
PPME1-205ENST00000539021 POLR2FP61218 127 aaKnown RBP9.6□□□□□ -0.87
PPME1-205ENST00000539021 LRRC63Q05C16 580 aa9.6□□□□□ -0.87
PPME1-205ENST00000539021 TMEM266Q2M3C6 531 aa9.6□□□□□ -0.87
PPME1-205ENST00000539021 UNC13DQ70J99 1090 aa9.6□□□□□ -0.87
PPME1-205ENST00000539021 BRINP3Q76B58 766 aa9.6□□□□□ -0.87
PPME1-205ENST00000539021 MYCBPAPQ8TBZ2 947 aa9.6□□□□□ -0.87
PPME1-205ENST00000539021 BAP1Q92560 729 aa9.6□□□□□ -0.87
PPME1-205ENST00000539021 LARP4BQ92615 738 aaKnown RBP9.6□□□□□ -0.87
PPME1-205ENST00000539021 DYNLL2Q96FJ2 89 aa9.6□□□□□ -0.87
PPME1-205ENST00000539021 LSM14BQ9BX40 385 aaKnown RBP9.6□□□□□ -0.87
PPME1-205ENST00000539021 CPVLQ9H3G5 476 aa9.6□□□□□ -0.87
PPME1-205ENST00000539021 CCDC87Q9NVE4 849 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms