RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 VSIG10LQ86VR7 867 aa15.02■□□□□ -0
CHFR-216ENST00000538235 DAGLBQ8NCG7 672 aa15.02■□□□□ -0
CHFR-216ENST00000538235 CYP2W1Q8TAV3 490 aa15.02■□□□□ -0
CHFR-216ENST00000538235 ABHD16BQ9H3Z7 469 aa15.02■□□□□ -0
CHFR-216ENST00000538235 VTA1Q9NP79 307 aa15.02■□□□□ -0
CHFR-216ENST00000538235 MAP3K20Q9NYL2 800 aaKnown RBP15.02■□□□□ -0
CHFR-216ENST00000538235 RBM27Q9P2N5 1060 aaKnown RBP15.02■□□□□ -0
CHFR-216ENST00000538235 CDKL5O76039 1030 aa15.01□□□□□ -0.01
CHFR-216ENST00000538235 PGK1P00558 417 aa15.01□□□□□ -0.01
CHFR-216ENST00000538235 ITGB5P18084 799 aa15.01□□□□□ -0.01
CHFR-216ENST00000538235 SP2Q02086 613 aa15.01□□□□□ -0.01
CHFR-216ENST00000538235 PDE4DQ08499 809 aa15.01□□□□□ -0.01
CHFR-216ENST00000538235 NR5A1Q13285 461 aa15.01□□□□□ -0.01
CHFR-216ENST00000538235 SAMD3Q8N6K7 520 aa15.01□□□□□ -0.01
CHFR-216ENST00000538235 SH3GLB2Q9NR46 395 aa15.01□□□□□ -0.01
CHFR-216ENST00000538235 RTEL1Q9NZ71 1219 aa15.01□□□□□ -0.01
CHFR-216ENST00000538235 NRBP1Q9UHY1 535 aa15.01□□□□□ -0.01
CHFR-216ENST00000538235 CNPY2Q9Y2B0 182 aa15.01□□□□□ -0.01
CHFR-216ENST00000538235 LOC102724159A0A0B4J2E5 919 aa15□□□□□ -0.01
CHFR-216ENST00000538235 KIF28PB7ZC32 967 aa15□□□□□ -0.01
CHFR-216ENST00000538235 SORBS3O60504 671 aa15□□□□□ -0.01
CHFR-216ENST00000538235 AKR1A1P14550 325 aa15□□□□□ -0.01
CHFR-216ENST00000538235 SREBF1P36956 1147 aa15□□□□□ -0.01
CHFR-216ENST00000538235 AKAP17AQ02040 695 aaKnown RBP15□□□□□ -0.01
CHFR-216ENST00000538235 TRAF1Q13077 416 aa15□□□□□ -0.01
CHFR-216ENST00000538235 PWP2Q15269 919 aaKnown RBP15□□□□□ -0.01
CHFR-216ENST00000538235 PCNX4Q63HM2 1172 aa15□□□□□ -0.01
CHFR-216ENST00000538235 KRT40Q6A162 431 aa15□□□□□ -0.01
CHFR-216ENST00000538235 CCSAPQ6IQ19 270 aaPredicted RBP15□□□□□ -0.01
CHFR-216ENST00000538235 CPLX2Q6PUV4 134 aaKnown RBP15□□□□□ -0.01
CHFR-216ENST00000538235 SEPT14Q6ZU15 432 aa15□□□□□ -0.01
CHFR-216ENST00000538235 REXO1Q8N1G1 1221 aaKnown RBP15□□□□□ -0.01
CHFR-216ENST00000538235 INPP4AQ96PE3 977 aaPredicted RBP15□□□□□ -0.01
CHFR-216ENST00000538235 IWS1Q96ST2 819 aa15□□□□□ -0.01
CHFR-216ENST00000538235 LLPHQ9BRT6 129 aaKnown RBP15□□□□□ -0.01
CHFR-216ENST00000538235 UPF3AQ9H1J1 476 aaKnown RBP15□□□□□ -0.01
CHFR-216ENST00000538235 PCDHA4Q9UN74 947 aa15□□□□□ -0.01
CHFR-216ENST00000538235 UBIAD1Q9Y5Z9 338 aa15□□□□□ -0.01
CHFR-216ENST00000538235 LTBP2Q14767 1821 aa14.99□□□□□ -0.01
CHFR-216ENST00000538235 TRIP12Q14669 1992 aaPredicted RBP14.99□□□□□ -0.01
CHFR-216ENST00000538235 IGLV3-22A0A075B6J6 115 aa14.99□□□□□ -0.01
CHFR-216ENST00000538235 FAM86B1E9PN63 330 aa14.99□□□□□ -0.01
CHFR-216ENST00000538235 FAM86B2P0C5J1 330 aa14.99□□□□□ -0.01
CHFR-216ENST00000538235 NLRP5P59047 1200 aa14.99□□□□□ -0.01
CHFR-216ENST00000538235 BEX3Q00994 111 aa14.99□□□□□ -0.01
CHFR-216ENST00000538235 ARHGAP1Q07960 439 aa14.99□□□□□ -0.01
CHFR-216ENST00000538235 LY6KQ17RY6 165 aa14.99□□□□□ -0.01
CHFR-216ENST00000538235 BLIDQ8IZY5 108 aa14.99□□□□□ -0.01
CHFR-216ENST00000538235 CCDC148Q8NFR7 591 aa14.99□□□□□ -0.01
CHFR-216ENST00000538235 SNX21Q969T3 373 aa14.99□□□□□ -0.01
CHFR-216ENST00000538235 LENG9Q96B70 501 aa14.99□□□□□ -0.01
CHFR-216ENST00000538235 UIMC1Q96RL1 719 aa14.99□□□□□ -0.01
CHFR-216ENST00000538235 WDR11Q9BZH6 1224 aa14.99□□□□□ -0.01
CHFR-216ENST00000538235 ATP9AO75110 1047 aa14.98□□□□□ -0.01
CHFR-216ENST00000538235 COL6A1P12109 1028 aa14.98□□□□□ -0.01
CHFR-216ENST00000538235 UBA1P22314 1058 aaKnown RBP14.98□□□□□ -0.01
CHFR-216ENST00000538235 CCND2P30279 289 aa14.98□□□□□ -0.01
CHFR-216ENST00000538235 MRPL12P52815 198 aaKnown RBP14.98□□□□□ -0.01
CHFR-216ENST00000538235 ARHGAP4P98171 946 aa14.98□□□□□ -0.01
CHFR-216ENST00000538235 TNFAIP2Q03169 654 aa14.98□□□□□ -0.01
CHFR-216ENST00000538235 AP3B2Q13367 1082 aa14.98□□□□□ -0.01
CHFR-216ENST00000538235 LRRC41Q15345 812 aa14.98□□□□□ -0.01
CHFR-216ENST00000538235 STXBP2Q15833 593 aa14.98□□□□□ -0.01
CHFR-216ENST00000538235 DUSP28Q4G0W2 176 aa14.98□□□□□ -0.01
CHFR-216ENST00000538235 KLHDC9Q8NEP7 349 aa14.98□□□□□ -0.01
CHFR-216ENST00000538235 C6orf50Q9HD87 102 aa14.98□□□□□ -0.01
CHFR-216ENST00000538235 XPNPEP3Q9NQH7 507 aa14.98□□□□□ -0.01
CHFR-216ENST00000538235 FOXD4L1Q9NU39 408 aa14.98□□□□□ -0.01
CHFR-216ENST00000538235 DDX41Q9UJV9 622 aaKnown RBP14.98□□□□□ -0.01
CHFR-216ENST00000538235 FAM184BQ9ULE4 1060 aa14.98□□□□□ -0.01
CHFR-216ENST00000538235 SPDYE3A6NKU9 549 aa14.97□□□□□ -0.01
CHFR-216ENST00000538235 BTBD18B2RXH4 712 aa14.97□□□□□ -0.01
CHFR-216ENST00000538235 K7ELQ4 463 aaPredicted RBP14.97□□□□□ -0.01
CHFR-216ENST00000538235 DUSP11O75319 330 aaKnown RBP14.97□□□□□ -0.01
CHFR-216ENST00000538235 EIF3JO75822 258 aaKnown RBP14.97□□□□□ -0.01
CHFR-216ENST00000538235 TDP2O95551 362 aa14.97□□□□□ -0.01
CHFR-216ENST00000538235 MMP1P03956 469 aa14.97□□□□□ -0.01
CHFR-216ENST00000538235 ARP10275 920 aa14.97□□□□□ -0.01
CHFR-216ENST00000538235 GJB2P29033 226 aa14.97□□□□□ -0.01
CHFR-216ENST00000538235 GJA9P57773 515 aa14.97□□□□□ -0.01
CHFR-216ENST00000538235 NKX3-2P78367 333 aa14.97□□□□□ -0.01
CHFR-216ENST00000538235 TLK2Q86UE8 772 aa14.97□□□□□ -0.01
CHFR-216ENST00000538235 PPP1R13LQ8WUF5 828 aa14.97□□□□□ -0.01
CHFR-216ENST00000538235 TMEM106CQ9BVX2 250 aa14.97□□□□□ -0.01
CHFR-216ENST00000538235 KCNA2P16389 499 aa14.96□□□□□ -0.01
CHFR-216ENST00000538235 ICAM3P32942 547 aa14.96□□□□□ -0.01
CHFR-216ENST00000538235 MCM2P49736 904 aa14.96□□□□□ -0.01
CHFR-216ENST00000538235 DIS3L2Q8IYB7 885 aaKnown RBP14.96□□□□□ -0.01
CHFR-216ENST00000538235 CCDC12Q8WUD4 166 aaPredicted RBP14.96□□□□□ -0.01
CHFR-216ENST00000538235 GJA10Q969M2 543 aa14.96□□□□□ -0.01
CHFR-216ENST00000538235 PAWRQ96IZ0 340 aaKnown RBP14.96□□□□□ -0.01
CHFR-216ENST00000538235 PKD2L1Q9P0L9 805 aa14.96□□□□□ -0.01
CHFR-216ENST00000538235 SIP14410 1827 aa14.96□□□□□ -0.01
CHFR-216ENST00000538235 ARID2Q68CP9 1835 aa14.95□□□□□ -0.02
CHFR-216ENST00000538235 SPATA31C2B4DYI2 1134 aa14.95□□□□□ -0.02
CHFR-216ENST00000538235 FARP2O94887 1054 aaPredicted RBP14.95□□□□□ -0.02
CHFR-216ENST00000538235 TFRCP02786 760 aaKnown RBP14.95□□□□□ -0.02
CHFR-216ENST00000538235 CYP3A4P08684 503 aa14.95□□□□□ -0.02
CHFR-216ENST00000538235 TXNP10599 105 aaKnown RBP14.95□□□□□ -0.02
CHFR-216ENST00000538235 RARBP10826 455 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms