RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 EP300Q09472 2414 aaPredicted RBP8.13□□□□□ -1.11
MSH6-209ENST00000538136 SCN11AQ9UI33 1791 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 GOLGA6L19H0YKK7 550 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 PFKFB2O60825 505 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 INHAP05111 366 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 RAG1P15918 1043 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 IFNAR1P17181 557 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 CSPP1Q1MSJ5 1256 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 HERC4Q5GLZ8 1057 aaPredicted RBP8.13□□□□□ -1.11
MSH6-209ENST00000538136 KRT25Q7Z3Z0 450 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 IL31RAQ8NI17 732 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 ZNF274Q96GC6 653 aaPredicted RBP8.13□□□□□ -1.11
MSH6-209ENST00000538136 TRIM47Q96LD4 638 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 TNMDQ9H2S6 317 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 BCAS3Q9H6U6 928 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.13□□□□□ -1.11
MSH6-209ENST00000538136 ZDBF2Q9HCK1 2354 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 FOXP2O15409 715 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 SP100P23497 879 aaPredicted RBP8.13□□□□□ -1.11
MSH6-209ENST00000538136 INHBEP58166 350 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 IFRD2Q12894 506 aaPredicted RBP8.13□□□□□ -1.11
MSH6-209ENST00000538136 GRM4Q14833 912 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 COL13A1Q5TAT6 717 aaPredicted RBP8.13□□□□□ -1.11
MSH6-209ENST00000538136 ZBTB33Q86T24 672 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 NOSTRINQ8IVI9 506 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 MYCT1Q8N699 235 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 FBXO18Q8NFZ0 1043 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 PAWRQ96IZ0 340 aaKnown RBP8.13□□□□□ -1.11
MSH6-209ENST00000538136 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.13□□□□□ -1.11
MSH6-209ENST00000538136 CEP131Q9UPN4 1083 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 NRAPQ86VF7 1730 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 SALL3Q9BXA9 1300 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 ARP10275 920 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 FGFR4P22455 802 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 LRRC41Q15345 812 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 PAN2Q504Q3 1202 aaKnown RBP8.12□□□□□ -1.11
MSH6-209ENST00000538136 TMEM63BQ5T3F8 832 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 LZTS2Q9BRK4 669 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 SYKP43405 635 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 TYW1BQ6NUM6 668 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 RHPN2Q8IUC4 686 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 PAF1Q8N7H5 531 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 BHMT2Q9H2M3 363 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 SETD4Q9NVD3 440 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 POLIQ9UNA4 740 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 PITPNM2Q9BZ72 1349 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 F13A1P00488 732 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 KRT19P08727 400 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 IGFBP4P22692 258 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 MAPK4P31152 587 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 CEP135Q66GS9 1140 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 KANK3Q6NY19 840 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 RABGGTAQ92696 567 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 TMEM143Q96AN5 459 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 EPSTI1Q96J88 318 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 TEKT3Q9BXF9 490 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 DACT1Q9NYF0 836 aa8.12□□□□□ -1.11
MSH6-209ENST00000538136 ABCA3Q99758 1704 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 POTEFA5A3E0 1075 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 PHF20L1A8MW92 1017 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 FKBP1BP68106 108 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 POTEGQ6S5H5 508 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 POTEEQ6S8J3 1075 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 C7orf61Q8IZ16 206 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 KRI1Q8N9T8 703 aaKnown RBP8.11□□□□□ -1.11
MSH6-209ENST00000538136 UNC93B1Q9H1C4 597 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 DDX19AQ9NUU7 478 aaKnown RBP8.11□□□□□ -1.11
MSH6-209ENST00000538136 PARP2Q9UGN5 583 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 PCDHA4Q9UN74 947 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 THSD7AQ9UPZ6 1657 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 ZBTB39O15060 712 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 THPOP40225 353 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 LACTBP83111 547 aaPredicted RBP8.11□□□□□ -1.11
MSH6-209ENST00000538136 OTOP2Q7RTS6 562 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 RNF180Q86T96 592 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 ABI1Q8IZP0 508 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 SYTL5Q8TDW5 730 aaPredicted RBP8.11□□□□□ -1.11
MSH6-209ENST00000538136 CPLX3Q8WVH0 158 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 CCDC127Q96BQ5 260 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 MAP7D2Q96T17 732 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 RNF26Q9BY78 433 aaPredicted RBP8.11□□□□□ -1.11
MSH6-209ENST00000538136 WDR70Q9NW82 654 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.11□□□□□ -1.11
MSH6-209ENST00000538136 LRP5O75197 1615 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 GOLGA4Q13439 2230 aaKnown RBP8.11□□□□□ -1.11
MSH6-209ENST00000538136 PHACTR2O75167 634 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 PCP11498 1178 aaKnown RBP8.11□□□□□ -1.11
MSH6-209ENST00000538136 RNASELQ05823 741 aaKnown RBP8.11□□□□□ -1.11
MSH6-209ENST00000538136 GABPAQ06546 454 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 PTPN21Q16825 1174 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 MYSM1Q5VVJ2 828 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 PPP1R18Q6NYC8 613 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 TINF2Q9BSI4 451 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 EHD4Q9H223 541 aa8.11□□□□□ -1.11
MSH6-209ENST00000538136 N4BP2Q86UW6 1770 aaPredicted RBP8.11□□□□□ -1.11
MSH6-209ENST00000538136 POTEB3A0JP26 581 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 SYCE3A1L190 88 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 ICAM1P05362 532 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 SLC10A3P09131 477 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 ZBTB48P10074 688 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms