RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 GCOM1H8Y6P7 765 aaPredicted RBP17.27■□□□□ 0.36
LRRK1-211ENST00000538064 POLR2MP0CAP2 368 aa17.27■□□□□ 0.36
LRRK1-211ENST00000538064 HOXA13P31271 388 aaPredicted RBP17.27■□□□□ 0.36
LRRK1-211ENST00000538064 PTPN11Q06124 597 aaPredicted RBP17.27■□□□□ 0.36
LRRK1-211ENST00000538064 NECTIN1Q15223 517 aa17.27■□□□□ 0.36
LRRK1-211ENST00000538064 LY6KQ17RY6 165 aa17.27■□□□□ 0.36
LRRK1-211ENST00000538064 NBPF20Q3BBV1 942 aa17.27■□□□□ 0.36
LRRK1-211ENST00000538064 SKAP1Q86WV1 359 aa17.27■□□□□ 0.36
LRRK1-211ENST00000538064 AFG1LQ8WV93 481 aa17.27■□□□□ 0.36
LRRK1-211ENST00000538064 FAM161BQ96MY7 647 aa17.27■□□□□ 0.36
LRRK1-211ENST00000538064 DDX41Q9UJV9 622 aaKnown RBP17.27■□□□□ 0.36
LRRK1-211ENST00000538064 MRVI1Q9Y6F6 885 aa17.27■□□□□ 0.36
LRRK1-211ENST00000538064 TRIP12Q14669 1992 aaPredicted RBP17.27■□□□□ 0.36
LRRK1-211ENST00000538064 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.26■□□□□ 0.35
LRRK1-211ENST00000538064 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.26■□□□□ 0.35
LRRK1-211ENST00000538064 ACRP10323 421 aa17.26■□□□□ 0.35
LRRK1-211ENST00000538064 COL9A3Q14050 684 aaPredicted RBP17.26■□□□□ 0.35
LRRK1-211ENST00000538064 PGM5Q15124 567 aa17.26■□□□□ 0.35
LRRK1-211ENST00000538064 FAM47CQ5HY64 1035 aa17.26■□□□□ 0.35
LRRK1-211ENST00000538064 ZNF365Q70YC5 407 aa17.26■□□□□ 0.35
LRRK1-211ENST00000538064 TMTC2Q8N394 836 aa17.26■□□□□ 0.35
LRRK1-211ENST00000538064 IL31RAQ8NI17 732 aa17.26■□□□□ 0.35
LRRK1-211ENST00000538064 LZTS2Q9BRK4 669 aa17.26■□□□□ 0.35
LRRK1-211ENST00000538064 MYL10Q9BUA6 226 aa17.26■□□□□ 0.35
LRRK1-211ENST00000538064 TTYH1Q9H313 450 aaPredicted RBP17.26■□□□□ 0.35
LRRK1-211ENST00000538064 SEMA6BQ9H3T3 888 aa17.26■□□□□ 0.35
LRRK1-211ENST00000538064 CCDC69A6NI79 296 aa17.25■□□□□ 0.35
LRRK1-211ENST00000538064 RGS20O76081 388 aa17.25■□□□□ 0.35
LRRK1-211ENST00000538064 DNAJB2P25686 324 aa17.25■□□□□ 0.35
LRRK1-211ENST00000538064 SMARCA1P28370 1054 aa17.25■□□□□ 0.35
LRRK1-211ENST00000538064 CCND2P30279 289 aa17.25■□□□□ 0.35
LRRK1-211ENST00000538064 LIFRP42702 1097 aa17.25■□□□□ 0.35
LRRK1-211ENST00000538064 CCL23P55773 120 aa17.25■□□□□ 0.35
LRRK1-211ENST00000538064 KCNV1Q6PIU1 500 aa17.25■□□□□ 0.35
LRRK1-211ENST00000538064 NFXL1Q6ZNB6 911 aa17.25■□□□□ 0.35
LRRK1-211ENST00000538064 PPTC7Q8NI37 304 aa17.25■□□□□ 0.35
LRRK1-211ENST00000538064 HERVK_113Q902F9 699 aa17.25■□□□□ 0.35
LRRK1-211ENST00000538064 MTIF3Q9H2K0 278 aaKnown RBP17.25■□□□□ 0.35
LRRK1-211ENST00000538064 CALM1P0DP23 149 aa17.24■□□□□ 0.35
LRRK1-211ENST00000538064 CALM2P0DP24 149 aa17.24■□□□□ 0.35
LRRK1-211ENST00000538064 CALM3P0DP25 149 aa17.24■□□□□ 0.35
LRRK1-211ENST00000538064 CYP2C9P11712 490 aa17.24■□□□□ 0.35
LRRK1-211ENST00000538064 MYCLP12524 364 aaPredicted RBP17.24■□□□□ 0.35
LRRK1-211ENST00000538064 GNAQP50148 359 aa17.24■□□□□ 0.35
LRRK1-211ENST00000538064 LAMC2Q13753 1193 aa17.24■□□□□ 0.35
LRRK1-211ENST00000538064 DGKDQ16760 1214 aa17.24■□□□□ 0.35
LRRK1-211ENST00000538064 RNF20Q5VTR2 975 aa17.24■□□□□ 0.35
LRRK1-211ENST00000538064 VSIG10LQ86VR7 867 aa17.24■□□□□ 0.35
LRRK1-211ENST00000538064 SESTD1Q86VW0 696 aa17.24■□□□□ 0.35
LRRK1-211ENST00000538064 RRP36Q96EU6 259 aaKnown RBP17.24■□□□□ 0.35
LRRK1-211ENST00000538064 CDX2Q99626 313 aaPredicted RBP17.24■□□□□ 0.35
LRRK1-211ENST00000538064 SEC63Q9UGP8 760 aaKnown RBP17.24■□□□□ 0.35
LRRK1-211ENST00000538064 PITPNM1O00562 1244 aa17.23■□□□□ 0.35
LRRK1-211ENST00000538064 CDC45O75419 566 aa17.23■□□□□ 0.35
LRRK1-211ENST00000538064 PLEKHA8P1O95397 391 aa17.23■□□□□ 0.35
LRRK1-211ENST00000538064 PFKMP08237 780 aa17.23■□□□□ 0.35
LRRK1-211ENST00000538064 HOXD8P13378 290 aaPredicted RBP17.23■□□□□ 0.35
LRRK1-211ENST00000538064 CASTP20810 708 aaKnown RBP17.23■□□□□ 0.35
LRRK1-211ENST00000538064 SGMS1Q86VZ5 419 aa17.23■□□□□ 0.35
LRRK1-211ENST00000538064 FCHSD1Q86WN1 690 aa17.23■□□□□ 0.35
LRRK1-211ENST00000538064 PIBF1Q8WXW3 757 aa17.23■□□□□ 0.35
LRRK1-211ENST00000538064 KAT2BQ92831 832 aa17.23■□□□□ 0.35
LRRK1-211ENST00000538064 F2P00734 622 aa17.22■□□□□ 0.35
LRRK1-211ENST00000538064 FGBP02675 491 aa17.22■□□□□ 0.35
LRRK1-211ENST00000538064 UBA1P22314 1058 aaKnown RBP17.22■□□□□ 0.35
LRRK1-211ENST00000538064 DHX37Q8IY37 1157 aaKnown RBP17.22■□□□□ 0.35
LRRK1-211ENST00000538064 RPUSD2Q8IZ73 545 aaKnown RBP17.22■□□□□ 0.35
LRRK1-211ENST00000538064 SRBD1Q8N5C6 995 aaKnown RBP17.22■□□□□ 0.35
LRRK1-211ENST00000538064 SLC17A8Q8NDX2 589 aa17.22■□□□□ 0.35
LRRK1-211ENST00000538064 TET1Q8NFU7 2136 aa17.22■□□□□ 0.35
LRRK1-211ENST00000538064 PPP1R13LQ8WUF5 828 aa17.22■□□□□ 0.35
LRRK1-211ENST00000538064 TIFAQ96CG3 184 aa17.22■□□□□ 0.35
LRRK1-211ENST00000538064 VWCEQ96DN2 955 aa17.22■□□□□ 0.35
LRRK1-211ENST00000538064 SCLYQ96I15 445 aa17.22■□□□□ 0.35
LRRK1-211ENST00000538064 KATNAL1Q9BW62 490 aa17.22■□□□□ 0.35
LRRK1-211ENST00000538064 CXXC1Q9P0U4 656 aaPredicted RBP17.22■□□□□ 0.35
LRRK1-211ENST00000538064 SLC12A7Q9Y666 1083 aa17.22■□□□□ 0.35
LRRK1-211ENST00000538064 PTPRSQ13332 1948 aa17.21■□□□□ 0.35
LRRK1-211ENST00000538064 PIK3CDO00329 1044 aa17.21■□□□□ 0.35
LRRK1-211ENST00000538064 STAM2O75886 525 aa17.21■□□□□ 0.35
LRRK1-211ENST00000538064 ZNF286BP0CG31 522 aa17.21■□□□□ 0.35
LRRK1-211ENST00000538064 TGFB3P10600 412 aa17.21■□□□□ 0.35
LRRK1-211ENST00000538064 RXRAP19793 462 aa17.21■□□□□ 0.35
LRRK1-211ENST00000538064 RFC2P35250 354 aa17.21■□□□□ 0.35
LRRK1-211ENST00000538064 CELF3Q5SZQ8 465 aaKnown RBP17.21■□□□□ 0.35
LRRK1-211ENST00000538064 LRRC2Q9BYS8 371 aa17.21■□□□□ 0.35
LRRK1-211ENST00000538064 PBX4Q9BYU1 374 aa17.21■□□□□ 0.35
LRRK1-211ENST00000538064 NOD1Q9Y239 953 aa17.21■□□□□ 0.35
LRRK1-211ENST00000538064 GRXCR1A8MXD5 290 aa17.2■□□□□ 0.34
LRRK1-211ENST00000538064 GGPS1O95749 300 aa17.2■□□□□ 0.34
LRRK1-211ENST00000538064 PSEN2P49810 448 aa17.2■□□□□ 0.34
LRRK1-211ENST00000538064 BFSP2Q13515 415 aa17.2■□□□□ 0.34
LRRK1-211ENST00000538064 PTGISQ16647 500 aa17.2■□□□□ 0.34
LRRK1-211ENST00000538064 GNPTABQ3T906 1256 aa17.2■□□□□ 0.34
LRRK1-211ENST00000538064 MYSM1Q5VVJ2 828 aa17.2■□□□□ 0.34
LRRK1-211ENST00000538064 TMTC3Q6ZXV5 915 aa17.2■□□□□ 0.34
LRRK1-211ENST00000538064 OTOP2Q7RTS6 562 aa17.2■□□□□ 0.34
LRRK1-211ENST00000538064 MICU3Q86XE3 530 aa17.2■□□□□ 0.34
LRRK1-211ENST00000538064 CCDC155Q8N6L0 562 aa17.2■□□□□ 0.34
LRRK1-211ENST00000538064 CAGE1Q8TC20 777 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms