RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 ATP8B4Q8TF62 1192 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 MTA3Q9BTC8 594 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 ABCF3Q9NUQ8 709 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 ADAMTSL3P82987 1691 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 RFX7Q2KHR2 1363 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 KIF28PB7ZC32 967 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 H0YGN5 161 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 POLR2DO15514 142 aaKnown RBP9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 BCRP11274 1271 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 COPB1P53618 953 aaKnown RBP9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 CACNA2D1P54289 1103 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 BTG3Q14201 252 aaPredicted RBP9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 HLTFQ14527 1009 aaKnown RBP eCLIP9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 OLFML1Q6UWY5 402 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 CFAP61Q8NHU2 1237 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 WDR60Q8WVS4 1066 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 RSPH1Q8WYR4 309 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 VPS16Q9H269 839 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 TUBA8Q9NY65 449 aaPredicted RBP9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 CYP39A1Q9NYL5 469 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 NFS1Q9Y697 457 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 XRN1Q8IZH2 1706 aaKnown RBP9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 KIF20BQ96Q89 1820 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 KDM4FA0A1W2PPD8 638 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 TTC26A0AVF1 554 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 ESYT3A0FGR9 886 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 GFPT2O94808 682 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 SUN1O94901 812 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 RAPGEF3O95398 923 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 LMNAP02545 664 aaKnown RBP9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 MMEP08473 750 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 TROVE2P10155 538 aaKnown RBP eCLIP9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 HARSP12081 509 aaKnown RBP9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 PDE6CP51160 858 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 ADCY1Q08828 1119 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 LSAMPQ13449 338 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 CUL1Q13616 776 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 FOXB2Q5VYV0 432 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 ASRGL1Q7L266 308 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 ZNF554Q86TJ5 538 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 KLHDC4Q8TBB5 520 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 PIGOQ8TEQ8 1089 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 FAM136AQ96C01 138 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 CLMNQ96JQ2 1002 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 HAPLN3Q96S86 360 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 ESF1Q9H501 851 aaKnown RBP9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 DDX25Q9UHL0 483 aaKnown RBP9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 SERTAD1Q9UHV2 236 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 CAPN11Q9UMQ6 739 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 TFR2Q9UP52 801 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 NCAPD2Q15021 1401 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 TPBGLP0DKB5 382 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 ALOX15P16050 662 aaPredicted RBP9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 KCNA3P22001 575 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 FBLN1P23142 703 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 UBXN1Q04323 297 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 SULT2A1Q06520 285 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 KPNB1Q14974 876 aaKnown RBP9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 MEA1Q16626 185 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 KIF2BQ8N4N8 673 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 ASAP3Q8TDY4 903 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 SH3TC2Q8TF17 1288 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 SPIRE2Q8WWL2 714 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 CASKIN2Q8WXE0 1202 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 SMC6Q96SB8 1091 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 BOLA2Q9H3K6 86 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 INTUQ9ULD6 942 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 CRB1P82279 1406 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 POGZQ7Z3K3 1410 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 PRPF3O43395 683 aaKnown RBP9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 OXCT1P55809 520 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 EIF3BP55884 814 aaKnown RBP9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 CNPY1Q3B7I2 92 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 KRT71Q3SY84 523 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 SLC44A4Q53GD3 710 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 NFRKBQ6P4R8 1299 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 EXOC3L1Q86VI1 746 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 FBXL16Q8N461 479 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 ENDOVQ8N8Q3 282 aaKnown RBP9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 ERMNQ8TAM6 284 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 CENPKQ9BS16 269 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 TCHPQ9BT92 498 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 SPATA16Q9BXB7 569 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 OXCT2Q9BYC2 517 aaPredicted RBP9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 ISCUQ9H1K1 167 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 STOML1Q9UBI4 398 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 TMED5Q9Y3A6 229 aa9.32□□□□□ -0.92
SRGAP1-202ENST00000537556 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 NUTM2BA6NNL0 878 aaPredicted RBP9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 NUTM2EB1AL46 878 aaPredicted RBP9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 O00370 1275 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 NVLO15381 856 aaKnown RBP9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 HNRNPRO43390 633 aaKnown RBP9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 PTDSS1P48651 473 aaKnown RBP9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 TNNC1P63316 161 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 PPARDQ03181 441 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 PARP6Q2NL67 630 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 KLC3Q6P597 504 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 TMEM110Q86TL2 294 aa9.31□□□□□ -0.92
SRGAP1-202ENST00000537556 VPS37DQ86XT2 251 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms