RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 THBS2P35442 1172 aa8.69□□□□□ -1.02
CCDC7-208ENST00000537047 STAT5AP42229 794 aa8.69□□□□□ -1.02
CCDC7-208ENST00000537047 PRSS53Q2L4Q9 553 aa8.69□□□□□ -1.02
CCDC7-208ENST00000537047 TMPRSS5Q9H3S3 457 aa8.69□□□□□ -1.02
CCDC7-208ENST00000537047 SMARCA5O60264 1052 aaPredicted RBP8.68□□□□□ -1.02
CCDC7-208ENST00000537047 ITGAVP06756 1048 aa8.68□□□□□ -1.02
CCDC7-208ENST00000537047 ATF4P18848 351 aaPredicted RBP8.68□□□□□ -1.02
CCDC7-208ENST00000537047 BCL6P41182 706 aa8.68□□□□□ -1.02
CCDC7-208ENST00000537047 ECI1P42126 302 aa8.68□□□□□ -1.02
CCDC7-208ENST00000537047 NCAPHQ15003 741 aa8.68□□□□□ -1.02
CCDC7-208ENST00000537047 CEP68Q76N32 757 aa8.68□□□□□ -1.02
CCDC7-208ENST00000537047 MILR1Q7Z6M3 343 aa8.68□□□□□ -1.02
CCDC7-208ENST00000537047 MIB1Q86YT6 1006 aa8.68□□□□□ -1.02
CCDC7-208ENST00000537047 CRACR2BQ8N4Y2 399 aaPredicted RBP8.68□□□□□ -1.02
CCDC7-208ENST00000537047 RBM15Q96T37 977 aaKnown RBP eCLIP8.68□□□□□ -1.02
CCDC7-208ENST00000537047 KRTAP17-1Q9BYP8 105 aa8.68□□□□□ -1.02
CCDC7-208ENST00000537047 AP5M1Q9H0R1 490 aa8.68□□□□□ -1.02
CCDC7-208ENST00000537047 ZNF143P52747 638 aaPredicted RBP8.67□□□□□ -1.02
CCDC7-208ENST00000537047 ITGA1P56199 1179 aa8.67□□□□□ -1.02
CCDC7-208ENST00000537047 RGL3Q3MIN7 710 aa8.67□□□□□ -1.02
CCDC7-208ENST00000537047 LARP1BQ659C4 914 aaKnown RBP8.67□□□□□ -1.02
CCDC7-208ENST00000537047 MICAL1Q8TDZ2 1067 aa8.67□□□□□ -1.02
CCDC7-208ENST00000537047 CCSER2Q9H7U1 834 aa8.67□□□□□ -1.02
CCDC7-208ENST00000537047 ITGB3P05106 788 aa8.66□□□□□ -1.02
CCDC7-208ENST00000537047 LCP1P13796 627 aa8.66□□□□□ -1.02
CCDC7-208ENST00000537047 RPL13P26373 211 aaKnown RBP8.66□□□□□ -1.02
CCDC7-208ENST00000537047 PUM1Q14671 1186 aaKnown RBP eCLIP8.66□□□□□ -1.02
CCDC7-208ENST00000537047 SV2CQ496J9 727 aa8.66□□□□□ -1.02
CCDC7-208ENST00000537047 MCTP2Q6DN12 878 aa8.66□□□□□ -1.02
CCDC7-208ENST00000537047 ZNF227Q86WZ6 799 aa8.66□□□□□ -1.02
CCDC7-208ENST00000537047 KYQ8NBH2 561 aa8.66□□□□□ -1.02
CCDC7-208ENST00000537047 KREMEN2Q8NCW0 462 aa8.66□□□□□ -1.02
CCDC7-208ENST00000537047 SEC14L1Q92503 715 aa8.66□□□□□ -1.02
CCDC7-208ENST00000537047 STRIP2Q9ULQ0 834 aa8.66□□□□□ -1.02
CCDC7-208ENST00000537047 TIMM13Q9Y5L4 95 aaPredicted RBP8.66□□□□□ -1.02
CCDC7-208ENST00000537047 SNRPB2P08579 225 aaKnown RBP8.65□□□□□ -1.02
CCDC7-208ENST00000537047 MAGEA10P43363 369 aaPredicted RBP8.65□□□□□ -1.02
CCDC7-208ENST00000537047 RPL11P62913 178 aaKnown RBP8.65□□□□□ -1.02
CCDC7-208ENST00000537047 ZNF827Q17R98 1081 aa8.65□□□□□ -1.02
CCDC7-208ENST00000537047 CR1LQ2VPA4 569 aa8.65□□□□□ -1.02
CCDC7-208ENST00000537047 MRM1Q6IN84 353 aaKnown RBP8.65□□□□□ -1.02
CCDC7-208ENST00000537047 DENND5AQ6IQ26 1287 aa8.65□□□□□ -1.02
CCDC7-208ENST00000537047 FAM178BQ8IXR5 827 aa8.65□□□□□ -1.02
CCDC7-208ENST00000537047 RCBTB1Q8NDN9 531 aa8.65□□□□□ -1.02
CCDC7-208ENST00000537047 DIO2Q92813 273 aa8.65□□□□□ -1.02
CCDC7-208ENST00000537047 GPR20Q99678 358 aa8.65□□□□□ -1.02
CCDC7-208ENST00000537047 MYRFQ9Y2G1 1151 aa8.65□□□□□ -1.02
CCDC7-208ENST00000537047 X6R8D5 127 aa8.65□□□□□ -1.02
CCDC7-208ENST00000537047 DDX3XO00571 662 aaKnown RBP eCLIP8.64□□□□□ -1.03
CCDC7-208ENST00000537047 NAT2P11245 290 aa8.64□□□□□ -1.03
CCDC7-208ENST00000537047 TBC1D10BQ4KMP7 808 aaPredicted RBP8.64□□□□□ -1.03
CCDC7-208ENST00000537047 PRR31Q5SQ13 230 aa8.64□□□□□ -1.03
CCDC7-208ENST00000537047 TRMT2BQ96GJ1 504 aaKnown RBP8.64□□□□□ -1.03
CCDC7-208ENST00000537047 SLC6A11P48066 632 aa8.63□□□□□ -1.03
CCDC7-208ENST00000537047 MROH9Q5TGP6 573 aa8.63□□□□□ -1.03
CCDC7-208ENST00000537047 RIOX2Q8IUF8 465 aa8.63□□□□□ -1.03
CCDC7-208ENST00000537047 FAM126BQ8IXS8 530 aa8.63□□□□□ -1.03
CCDC7-208ENST00000537047 Q8N1Y9 231 aa8.63□□□□□ -1.03
CCDC7-208ENST00000537047 ACTR10Q9NZ32 417 aa8.63□□□□□ -1.03
CCDC7-208ENST00000537047 LRP2BPQ9P2M1 347 aa8.63□□□□□ -1.03
CCDC7-208ENST00000537047 INVSQ9Y283 1065 aa8.63□□□□□ -1.03
CCDC7-208ENST00000537047 MEFVO15553 781 aaPredicted RBP8.62□□□□□ -1.03
CCDC7-208ENST00000537047 SUSD5O60279 629 aa8.62□□□□□ -1.03
CCDC7-208ENST00000537047 ETFBP38117 255 aa8.62□□□□□ -1.03
CCDC7-208ENST00000537047 ADAM17P78536 824 aa8.62□□□□□ -1.03
CCDC7-208ENST00000537047 ADAM9Q13443 819 aa8.62□□□□□ -1.03
CCDC7-208ENST00000537047 IQCEQ6IPM2 695 aa8.62□□□□□ -1.03
CCDC7-208ENST00000537047 TXNDC5Q8NBS9 432 aaKnown RBP8.62□□□□□ -1.03
CCDC7-208ENST00000537047 ARRDC4Q8NCT1 418 aa8.62□□□□□ -1.03
CCDC7-208ENST00000537047 TMEM169Q96HH4 297 aa8.62□□□□□ -1.03
CCDC7-208ENST00000537047 ZSWIM3Q96MP5 696 aa8.62□□□□□ -1.03
CCDC7-208ENST00000537047 KRTAP3-1Q9BYR8 98 aa8.62□□□□□ -1.03
CCDC7-208ENST00000537047 SMPD4Q9NXE4 827 aa8.62□□□□□ -1.03
CCDC7-208ENST00000537047 HOXC12P31275 282 aa8.61□□□□□ -1.03
CCDC7-208ENST00000537047 KCNJ6P48051 423 aa8.61□□□□□ -1.03
CCDC7-208ENST00000537047 E4F1Q66K89 784 aaPredicted RBP8.61□□□□□ -1.03
CCDC7-208ENST00000537047 ZC3H18Q86VM9 953 aaKnown RBP8.61□□□□□ -1.03
CCDC7-208ENST00000537047 TMEM145Q8NBT3 493 aa8.61□□□□□ -1.03
CCDC7-208ENST00000537047 WASF3Q9UPY6 502 aa8.61□□□□□ -1.03
CCDC7-208ENST00000537047 PCDHA2Q9Y5H9 948 aa8.61□□□□□ -1.03
CCDC7-208ENST00000537047 MROH6A6NGR9 719 aa8.6□□□□□ -1.03
CCDC7-208ENST00000537047 DDAH1O94760 285 aa8.6□□□□□ -1.03
CCDC7-208ENST00000537047 SCG5P05408 212 aa8.6□□□□□ -1.03
CCDC7-208ENST00000537047 GRIA2P42262 883 aa8.6□□□□□ -1.03
CCDC7-208ENST00000537047 PPIL6Q8IXY8 311 aa8.6□□□□□ -1.03
CCDC7-208ENST00000537047 TTLL6Q8N841 843 aa8.6□□□□□ -1.03
CCDC7-208ENST00000537047 PLATP00750 562 aa8.59□□□□□ -1.03
CCDC7-208ENST00000537047 SSBP05455 408 aaKnown RBP eCLIP8.59□□□□□ -1.03
CCDC7-208ENST00000537047 GFRA1P56159 465 aa8.59□□□□□ -1.03
CCDC7-208ENST00000537047 LIMS2Q7Z4I7 341 aa8.59□□□□□ -1.03
CCDC7-208ENST00000537047 C1orf159Q96HA4 380 aa8.59□□□□□ -1.03
CCDC7-208ENST00000537047 LOXL4Q96JB6 756 aa8.59□□□□□ -1.03
CCDC7-208ENST00000537047 CHAMP1Q96JM3 812 aa8.59□□□□□ -1.03
CCDC7-208ENST00000537047 C8orf49Q96NF6 230 aa8.59□□□□□ -1.03
CCDC7-208ENST00000537047 KCNAB2Q13303 367 aa8.58□□□□□ -1.04
CCDC7-208ENST00000537047 FAM26FQ5R3K3 315 aa8.58□□□□□ -1.04
CCDC7-208ENST00000537047 YIPF4Q9BSR8 244 aa8.58□□□□□ -1.04
CCDC7-208ENST00000537047 SSBP3Q9BWW4 388 aaPredicted RBP8.58□□□□□ -1.04
CCDC7-208ENST00000537047 CAPN10Q9HC96 672 aa8.58□□□□□ -1.04
CCDC7-208ENST00000537047 RBPJLQ9UBG7 517 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms