RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 ZNF552Q9H707 407 aaPredicted RBP8.22□□□□□ -1.09
CLIP1-207ENST00000536634 CLEC1BQ9P126 229 aa8.22□□□□□ -1.09
CLIP1-207ENST00000536634 SPAG9O60271 1321 aaKnown RBP8.22□□□□□ -1.09
CLIP1-207ENST00000536634 OR14I1A6ND48 311 aa8.21□□□□□ -1.1
CLIP1-207ENST00000536634 KRT1P04264 644 aa8.21□□□□□ -1.1
CLIP1-207ENST00000536634 THBDP07204 575 aa8.21□□□□□ -1.1
CLIP1-207ENST00000536634 PLS3P13797 630 aa8.21□□□□□ -1.1
CLIP1-207ENST00000536634 L1CAMP32004 1257 aa8.21□□□□□ -1.1
CLIP1-207ENST00000536634 ERVFRD-1P60508 538 aa8.21□□□□□ -1.1
CLIP1-207ENST00000536634 SF1Q15637 639 aaKnown RBP8.21□□□□□ -1.1
CLIP1-207ENST00000536634 GGT6Q6P531 493 aa8.21□□□□□ -1.1
CLIP1-207ENST00000536634 MCOLN1Q9GZU1 580 aa8.21□□□□□ -1.1
CLIP1-207ENST00000536634 TNFRSF12AQ9NP84 129 aa8.21□□□□□ -1.1
CLIP1-207ENST00000536634 CYP26B1Q9NR63 512 aa8.21□□□□□ -1.1
CLIP1-207ENST00000536634 GPATCH8Q9UKJ3 1502 aaKnown RBP8.2□□□□□ -1.1
CLIP1-207ENST00000536634 CAPNS1P04632 268 aa8.2□□□□□ -1.1
CLIP1-207ENST00000536634 PAMP19021 973 aa8.2□□□□□ -1.1
CLIP1-207ENST00000536634 TACR1P25103 407 aa8.2□□□□□ -1.1
CLIP1-207ENST00000536634 HNRNPMP52272 730 aaKnown RBP eCLIP8.2□□□□□ -1.1
CLIP1-207ENST00000536634 EPN3Q9H201 632 aa8.2□□□□□ -1.1
CLIP1-207ENST00000536634 FBLN5Q9UBX5 448 aa8.2□□□□□ -1.1
CLIP1-207ENST00000536634 PPP1R1BQ9UD71 204 aaPredicted RBP8.2□□□□□ -1.1
CLIP1-207ENST00000536634 RNF17Q9BXT8 1623 aaKnown RBP8.19□□□□□ -1.1
CLIP1-207ENST00000536634 ADGBQ8N7X0 1667 aa8.19□□□□□ -1.1
CLIP1-207ENST00000536634 NPHP3-ACAD11A0A0J9YXS1 232 aa8.19□□□□□ -1.1
CLIP1-207ENST00000536634 A0A1W2PQ27 194 aa8.19□□□□□ -1.1
CLIP1-207ENST00000536634 A0A1W2PQ64 194 aa8.19□□□□□ -1.1
CLIP1-207ENST00000536634 A0A1W2PQC6 194 aa8.19□□□□□ -1.1
CLIP1-207ENST00000536634 A0A1W2PQD8 194 aa8.19□□□□□ -1.1
CLIP1-207ENST00000536634 A0A1W2PQU0 124 aa8.19□□□□□ -1.1
CLIP1-207ENST00000536634 PPP1R11O60927 126 aaPredicted RBP8.19□□□□□ -1.1
CLIP1-207ENST00000536634 ARL4AP40617 200 aa8.19□□□□□ -1.1
CLIP1-207ENST00000536634 GRIA2P42262 883 aa8.19□□□□□ -1.1
CLIP1-207ENST00000536634 PRSS53Q2L4Q9 553 aa8.19□□□□□ -1.1
CLIP1-207ENST00000536634 NPM2Q86SE8 214 aaKnown RBP8.19□□□□□ -1.1
CLIP1-207ENST00000536634 NPLOC4Q8TAT6 608 aa8.19□□□□□ -1.1
CLIP1-207ENST00000536634 FRS2Q8WU20 508 aa8.19□□□□□ -1.1
CLIP1-207ENST00000536634 SLC38A3Q99624 504 aa8.19□□□□□ -1.1
CLIP1-207ENST00000536634 PDLIM7Q9NR12 457 aa8.19□□□□□ -1.1
CLIP1-207ENST00000536634 KLHL14Q9P2G3 628 aa8.19□□□□□ -1.1
CLIP1-207ENST00000536634 MSRB2Q9Y3D2 182 aa8.19□□□□□ -1.1
CLIP1-207ENST00000536634 SETD1AO15047 1707 aaKnown RBP8.19□□□□□ -1.1
CLIP1-207ENST00000536634 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.19□□□□□ -1.1
CLIP1-207ENST00000536634 CCDC18Q5T9S5 1454 aa8.19□□□□□ -1.1
CLIP1-207ENST00000536634 LRRC7Q96NW7 1537 aa8.19□□□□□ -1.1
CLIP1-207ENST00000536634 DEPDC5O75140 1603 aa8.18□□□□□ -1.1
CLIP1-207ENST00000536634 IQGAP1P46940 1657 aa8.18□□□□□ -1.1
CLIP1-207ENST00000536634 ARNTLO00327 626 aa8.18□□□□□ -1.1
CLIP1-207ENST00000536634 SNRPB2P08579 225 aaKnown RBP8.18□□□□□ -1.1
CLIP1-207ENST00000536634 ECI1P42126 302 aa8.18□□□□□ -1.1
CLIP1-207ENST00000536634 PPP2R2AP63151 447 aa8.18□□□□□ -1.1
CLIP1-207ENST00000536634 SLC26A8Q96RN1 970 aa8.18□□□□□ -1.1
CLIP1-207ENST00000536634 GULP1Q9UBP9 304 aa8.18□□□□□ -1.1
CLIP1-207ENST00000536634 TNRQ92752 1358 aa8.18□□□□□ -1.1
CLIP1-207ENST00000536634 NPHP4O75161 1426 aaPredicted RBP8.18□□□□□ -1.1
CLIP1-207ENST00000536634 CASKIN1Q8WXD9 1431 aa8.18□□□□□ -1.1
CLIP1-207ENST00000536634 MED14O60244 1454 aa8.18□□□□□ -1.1
CLIP1-207ENST00000536634 C7orf72A4D263 438 aa8.17□□□□□ -1.1
CLIP1-207ENST00000536634 NUDT19A8MXV4 375 aa8.17□□□□□ -1.1
CLIP1-207ENST00000536634 ETV2O00321 342 aaPredicted RBP8.17□□□□□ -1.1
CLIP1-207ENST00000536634 PEX10O60683 326 aa8.17□□□□□ -1.1
CLIP1-207ENST00000536634 VIPR1P32241 457 aa8.17□□□□□ -1.1
CLIP1-207ENST00000536634 GFRA1P56159 465 aa8.17□□□□□ -1.1
CLIP1-207ENST00000536634 CORO7P57737 925 aa8.17□□□□□ -1.1
CLIP1-207ENST00000536634 YBX1P67809 324 aaKnown RBP8.17□□□□□ -1.1
CLIP1-207ENST00000536634 RAB3GAP1Q15042 981 aa8.17□□□□□ -1.1
CLIP1-207ENST00000536634 INF2Q27J81 1249 aa8.17□□□□□ -1.1
CLIP1-207ENST00000536634 NLGN2Q8NFZ4 835 aa8.17□□□□□ -1.1
CLIP1-207ENST00000536634 SGPP1Q9BX95 441 aa8.17□□□□□ -1.1
CLIP1-207ENST00000536634 TMEFF2Q9UIK5 374 aaPredicted RBP8.17□□□□□ -1.1
CLIP1-207ENST00000536634 RWDD3Q9Y3V2 267 aa8.17□□□□□ -1.1
CLIP1-207ENST00000536634 KIAA1107Q9UPP5 1409 aa8.17□□□□□ -1.1
CLIP1-207ENST00000536634 PZPP20742 1482 aa8.17□□□□□ -1.1
CLIP1-207ENST00000536634 SYNMO15061 1565 aa8.17□□□□□ -1.1
CLIP1-207ENST00000536634 TRBV23OR9-2A0A075B6M9 112 aa8.16□□□□□ -1.1
CLIP1-207ENST00000536634 MPOP05164 745 aa8.16□□□□□ -1.1
CLIP1-207ENST00000536634 SCG5P05408 212 aa8.16□□□□□ -1.1
CLIP1-207ENST00000536634 C1QTNF9P0C862 333 aa8.16□□□□□ -1.1
CLIP1-207ENST00000536634 HOXC12P31275 282 aa8.16□□□□□ -1.1
CLIP1-207ENST00000536634 BICRALQ6AI39 1079 aa8.16□□□□□ -1.1
CLIP1-207ENST00000536634 DENND5AQ6IQ26 1287 aa8.16□□□□□ -1.1
CLIP1-207ENST00000536634 RPTNQ6XPR3 784 aa8.16□□□□□ -1.1
CLIP1-207ENST00000536634 XIRP1Q702N8 1843 aaKnown RBP8.16□□□□□ -1.1
CLIP1-207ENST00000536634 CCDC103Q8IW40 242 aa8.16□□□□□ -1.1
CLIP1-207ENST00000536634 TMEM145Q8NBT3 493 aa8.16□□□□□ -1.1
CLIP1-207ENST00000536634 KREMEN2Q8NCW0 462 aa8.16□□□□□ -1.1
CLIP1-207ENST00000536634 ARMC5Q96C12 935 aa8.16□□□□□ -1.1
CLIP1-207ENST00000536634 MMP19Q99542 508 aa8.16□□□□□ -1.1
CLIP1-207ENST00000536634 UGGT1Q9NYU2 1555 aa8.15□□□□□ -1.1
CLIP1-207ENST00000536634 KDM5DQ9BY66 1539 aa8.15□□□□□ -1.1
CLIP1-207ENST00000536634 TEX51A0A1B0GUA7 166 aa8.15□□□□□ -1.1
CLIP1-207ENST00000536634 CCDC85CA6NKD9 419 aa8.15□□□□□ -1.1
CLIP1-207ENST00000536634 HRKO00198 91 aa8.15□□□□□ -1.1
CLIP1-207ENST00000536634 AGRPO00253 132 aa8.15□□□□□ -1.1
CLIP1-207ENST00000536634 U2SURPO15042 1029 aaKnown RBP8.15□□□□□ -1.1
CLIP1-207ENST00000536634 TSPAN15O95858 294 aa8.15□□□□□ -1.1
CLIP1-207ENST00000536634 DBHP09172 617 aa8.15□□□□□ -1.1
CLIP1-207ENST00000536634 KCNJ6P48051 423 aa8.15□□□□□ -1.1
CLIP1-207ENST00000536634 SRSF3P84103 164 aaKnown RBP8.15□□□□□ -1.1
CLIP1-207ENST00000536634 RBL2Q08999 1139 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms