RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 POLR2MP0CAP2 368 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 CAPN2P17655 700 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 MNAT1P51948 309 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 POTEGQ6S5H5 508 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 POTEEQ6S8J3 1075 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 SEPT14Q6ZU15 432 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 PLA2G4DQ86XP0 818 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 NUDT12Q9BQG2 462 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 XPO4Q9C0E2 1151 aaKnown RBP9.17□□□□□ -0.94
ABCA4-207ENST00000536513 SH2D4AQ9H788 454 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 STK36Q9NRP7 1315 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 SBF2Q86WG5 1849 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 ZBTB39O15060 712 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 HIRAP54198 1017 aaPredicted RBP9.17□□□□□ -0.94
ABCA4-207ENST00000536513 ARHGAP4P98171 946 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 TMEM87AQ8NBN3 555 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 IL17RAQ96F46 866 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 ERO1AQ96HE7 468 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 N4BP3O15049 544 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 GAS7O60861 476 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 ZBED4O75132 1171 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 ARID5AQ03989 594 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 HERC4Q5GLZ8 1057 aaPredicted RBP9.17□□□□□ -0.94
ABCA4-207ENST00000536513 VCPKMTQ9H867 229 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 TAB2Q9NYJ8 693 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 GPRC5DQ9NZD1 345 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 UBR3Q6ZT12 1888 aa9.16□□□□□ -0.94
ABCA4-207ENST00000536513 GTPBP6O43824 516 aaPredicted RBP9.16□□□□□ -0.94
ABCA4-207ENST00000536513 RDXP35241 583 aaKnown RBP9.16□□□□□ -0.94
ABCA4-207ENST00000536513 ARHGEF16Q5VV41 709 aa9.16□□□□□ -0.94
ABCA4-207ENST00000536513 RESP18Q5W5W9 173 aa9.16□□□□□ -0.94
ABCA4-207ENST00000536513 SIAH1Q8IUQ4 282 aa9.16□□□□□ -0.94
ABCA4-207ENST00000536513 PAGE5Q96GU1 130 aa9.16□□□□□ -0.94
ABCA4-207ENST00000536513 SPZ1Q9BXG8 430 aa9.16□□□□□ -0.94
ABCA4-207ENST00000536513 CENPHQ9H3R5 247 aa9.16□□□□□ -0.94
ABCA4-207ENST00000536513 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.16□□□□□ -0.94
ABCA4-207ENST00000536513 PPP6R2O75170 966 aa9.16□□□□□ -0.94
ABCA4-207ENST00000536513 FCER1AP12319 257 aa9.16□□□□□ -0.94
ABCA4-207ENST00000536513 ATL3Q6DD88 541 aa9.16□□□□□ -0.94
ABCA4-207ENST00000536513 BANK1Q8NDB2 785 aa9.16□□□□□ -0.94
ABCA4-207ENST00000536513 SRRTQ9BXP5 876 aaKnown RBP9.16□□□□□ -0.94
ABCA4-207ENST00000536513 DDX41Q9UJV9 622 aaKnown RBP9.16□□□□□ -0.94
ABCA4-207ENST00000536513 MAN1B1Q9UKM7 699 aa9.16□□□□□ -0.94
ABCA4-207ENST00000536513 TMEM150BA6NC51 233 aa9.16□□□□□ -0.94
ABCA4-207ENST00000536513 MTIF2P46199 727 aaKnown RBP9.16□□□□□ -0.94
ABCA4-207ENST00000536513 DNA2P51530 1060 aa9.16□□□□□ -0.94
ABCA4-207ENST00000536513 ZSCAN26Q16670 478 aa9.16□□□□□ -0.94
ABCA4-207ENST00000536513 SUPT20HL1Q3ZLR7 823 aa9.16□□□□□ -0.94
ABCA4-207ENST00000536513 FERMT2Q96AC1 680 aa9.16□□□□□ -0.94
ABCA4-207ENST00000536513 RRAGCQ9HB90 399 aa9.16□□□□□ -0.94
ABCA4-207ENST00000536513 NYAP2Q9P242 653 aa9.16□□□□□ -0.94
ABCA4-207ENST00000536513 C4AP0C0L4 1744 aa9.15□□□□□ -0.94
ABCA4-207ENST00000536513 A0A1W2PQ27 194 aa9.15□□□□□ -0.94
ABCA4-207ENST00000536513 A0A1W2PQ64 194 aa9.15□□□□□ -0.94
ABCA4-207ENST00000536513 A0A1W2PQD8 194 aa9.15□□□□□ -0.94
ABCA4-207ENST00000536513 CHRM1P11229 460 aaPredicted RBP9.15□□□□□ -0.94
ABCA4-207ENST00000536513 HARSP12081 509 aaKnown RBP9.15□□□□□ -0.94
ABCA4-207ENST00000536513 VCAM1P19320 739 aa9.15□□□□□ -0.94
ABCA4-207ENST00000536513 ADKP55263 362 aaKnown RBP9.15□□□□□ -0.94
ABCA4-207ENST00000536513 HDLBPQ00341 1268 aaKnown RBP9.15□□□□□ -0.94
ABCA4-207ENST00000536513 IL17AQ16552 155 aa9.15□□□□□ -0.94
ABCA4-207ENST00000536513 TTC31Q49AM3 519 aaPredicted RBP9.15□□□□□ -0.94
ABCA4-207ENST00000536513 SV2BQ7L1I2 683 aa9.15□□□□□ -0.94
ABCA4-207ENST00000536513 ENGASEQ8NFI3 743 aa9.15□□□□□ -0.94
ABCA4-207ENST00000536513 SLF1Q9BQI6 1058 aa9.15□□□□□ -0.94
ABCA4-207ENST00000536513 ACBD3Q9H3P7 528 aa9.15□□□□□ -0.94
ABCA4-207ENST00000536513 ARFGAP3Q9NP61 516 aa9.15□□□□□ -0.94
ABCA4-207ENST00000536513 MAGEC2Q9UBF1 373 aaPredicted RBP9.15□□□□□ -0.94
ABCA4-207ENST00000536513 UNCXA6NJT0 531 aa9.15□□□□□ -0.94
ABCA4-207ENST00000536513 NLRP12P59046 1061 aa9.15□□□□□ -0.94
ABCA4-207ENST00000536513 GNG11P61952 73 aa9.15□□□□□ -0.94
ABCA4-207ENST00000536513 BAATQ14032 418 aaPredicted RBP9.15□□□□□ -0.94
ABCA4-207ENST00000536513 RMDN3Q96TC7 470 aa9.15□□□□□ -0.94
ABCA4-207ENST00000536513 CRACR2AQ9BSW2 395 aa9.15□□□□□ -0.94
ABCA4-207ENST00000536513 ZMYND12Q9H0C1 365 aa9.15□□□□□ -0.94
ABCA4-207ENST00000536513 COL5A3P25940 1745 aaPredicted RBP9.15□□□□□ -0.94
ABCA4-207ENST00000536513 WNK3Q9BYP7 1800 aa9.15□□□□□ -0.95
ABCA4-207ENST00000536513 EIF3JO75822 258 aaKnown RBP9.15□□□□□ -0.95
ABCA4-207ENST00000536513 PGK2P07205 417 aa9.15□□□□□ -0.95
ABCA4-207ENST00000536513 FGRP09769 529 aa9.15□□□□□ -0.95
ABCA4-207ENST00000536513 EPHX2P34913 555 aa9.15□□□□□ -0.95
ABCA4-207ENST00000536513 MATR3P43243 847 aaKnown RBP eCLIP9.15□□□□□ -0.95
ABCA4-207ENST00000536513 MYL5Q02045 173 aa9.15□□□□□ -0.95
ABCA4-207ENST00000536513 STIM1Q13586 685 aa9.15□□□□□ -0.95
ABCA4-207ENST00000536513 NPY5RQ15761 445 aa9.15□□□□□ -0.95
ABCA4-207ENST00000536513 LRCH2Q5VUJ6 765 aa9.15□□□□□ -0.95
ABCA4-207ENST00000536513 FBXO38Q6PIJ6 1188 aa9.15□□□□□ -0.95
ABCA4-207ENST00000536513 KSR1Q8IVT5 923 aa9.15□□□□□ -0.95
ABCA4-207ENST00000536513 ANKRD20A12PQ8NF67 263 aa9.15□□□□□ -0.95
ABCA4-207ENST00000536513 SLC10A4Q96EP9 437 aa9.15□□□□□ -0.95
ABCA4-207ENST00000536513 BHMT2Q9H2M3 363 aa9.15□□□□□ -0.95
ABCA4-207ENST00000536513 RNF146Q9NTX7 359 aa9.15□□□□□ -0.95
ABCA4-207ENST00000536513 VPS18Q9P253 973 aa9.15□□□□□ -0.95
ABCA4-207ENST00000536513 MARK3P27448 753 aa9.14□□□□□ -0.95
ABCA4-207ENST00000536513 ZNF75DP51815 510 aa9.14□□□□□ -0.95
ABCA4-207ENST00000536513 CDR1P51861 262 aa9.14□□□□□ -0.95
ABCA4-207ENST00000536513 FANCCQ00597 558 aa9.14□□□□□ -0.95
ABCA4-207ENST00000536513 GPBP1Q86WP2 473 aa9.14□□□□□ -0.95
ABCA4-207ENST00000536513 PRPF38AQ8NAV1 312 aaKnown RBP9.14□□□□□ -0.95
ABCA4-207ENST00000536513 ZNF280CQ8ND82 737 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms