RNA–Protein interactions for RNA: ENST00000536509.5

LMO3-214, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-214ENST00000536509 CAGE1Q8TC20 777 aa13.01□□□□□ -0.33
LMO3-214ENST00000536509 ESR2Q92731 530 aa13.01□□□□□ -0.33
LMO3-214ENST00000536509 NOD1Q9Y239 953 aa13.01□□□□□ -0.33
LMO3-214ENST00000536509 LAMA4Q16363 1823 aa13.01□□□□□ -0.33
LMO3-214ENST00000536509 CCDC171Q6TFL3 1326 aa13□□□□□ -0.33
LMO3-214ENST00000536509 A0A0D9SFI3 127 aa13□□□□□ -0.33
LMO3-214ENST00000536509 CA3P07451 260 aa13□□□□□ -0.33
LMO3-214ENST00000536509 COL9A1P20849 921 aa13□□□□□ -0.33
LMO3-214ENST00000536509 HDAC1Q13547 482 aaPredicted RBP13□□□□□ -0.33
LMO3-214ENST00000536509 ASTLQ6HA08 431 aaPredicted RBP13□□□□□ -0.33
LMO3-214ENST00000536509 SESTD1Q86VW0 696 aa13□□□□□ -0.33
LMO3-214ENST00000536509 IQCA1Q86XH1 822 aa13□□□□□ -0.33
LMO3-214ENST00000536509 MCF2L2Q86YR7 1114 aa13□□□□□ -0.33
LMO3-214ENST00000536509 NSUN6Q8TEA1 469 aaKnown RBP13□□□□□ -0.33
LMO3-214ENST00000536509 AFAP1L1Q8TED9 768 aa13□□□□□ -0.33
LMO3-214ENST00000536509 FAM227BQ96M60 508 aa13□□□□□ -0.33
LMO3-214ENST00000536509 IWS1Q96ST2 819 aa13□□□□□ -0.33
LMO3-214ENST00000536509 FTOQ9C0B1 505 aaKnown RBP eCLIP13□□□□□ -0.33
LMO3-214ENST00000536509 COG5Q9UP83 839 aa13□□□□□ -0.33
LMO3-214ENST00000536509 TCF20Q9UGU0 1960 aaKnown RBP13□□□□□ -0.33
LMO3-214ENST00000536509 ABCB11O95342 1321 aa12.99□□□□□ -0.33
LMO3-214ENST00000536509 GH1P01241 217 aa12.99□□□□□ -0.33
LMO3-214ENST00000536509 MYOGP15173 224 aa12.99□□□□□ -0.33
LMO3-214ENST00000536509 AAMPQ13685 434 aa12.99□□□□□ -0.33
LMO3-214ENST00000536509 E2F4Q16254 413 aa12.99□□□□□ -0.33
LMO3-214ENST00000536509 HERC6Q8IVU3 1022 aa12.99□□□□□ -0.33
LMO3-214ENST00000536509 TET1Q8NFU7 2136 aa12.98□□□□□ -0.33
LMO3-214ENST00000536509 MYH7BA7E2Y1 1941 aa12.98□□□□□ -0.33
LMO3-214ENST00000536509 TRANK1O15050 2925 aa12.98□□□□□ -0.33
LMO3-214ENST00000536509 ZNF213O14771 459 aa12.98□□□□□ -0.33
LMO3-214ENST00000536509 GABBR2O75899 941 aa12.98□□□□□ -0.33
LMO3-214ENST00000536509 BMP1P13497 986 aa12.98□□□□□ -0.33
LMO3-214ENST00000536509 CASTP20810 708 aaKnown RBP12.98□□□□□ -0.33
LMO3-214ENST00000536509 KCNJ6P48051 423 aa12.98□□□□□ -0.33
LMO3-214ENST00000536509 HAND2P61296 217 aa12.98□□□□□ -0.33
LMO3-214ENST00000536509 SKIV2LQ15477 1246 aaKnown RBP12.98□□□□□ -0.33
LMO3-214ENST00000536509 STXBP2Q15833 593 aa12.98□□□□□ -0.33
LMO3-214ENST00000536509 PTGISQ16647 500 aa12.98□□□□□ -0.33
LMO3-214ENST00000536509 USH1GQ495M9 461 aa12.98□□□□□ -0.33
LMO3-214ENST00000536509 ASPRV1Q53RT3 343 aa12.98□□□□□ -0.33
LMO3-214ENST00000536509 CCDC62Q6P9F0 684 aa12.98□□□□□ -0.33
LMO3-214ENST00000536509 MICALL1Q8N3F8 863 aa12.98□□□□□ -0.33
LMO3-214ENST00000536509 KATNAL1Q9BW62 490 aa12.98□□□□□ -0.33
LMO3-214ENST00000536509 C1QTNF1Q9BXJ1 281 aa12.98□□□□□ -0.33
LMO3-214ENST00000536509 MTCH2Q9Y6C9 303 aa12.98□□□□□ -0.33
LMO3-214ENST00000536509 PRRC2BQ5JSZ5 2229 aaKnown RBP12.98□□□□□ -0.33
LMO3-214ENST00000536509 TRIM6-TRIM34B2RNG4 842 aa12.97□□□□□ -0.33
LMO3-214ENST00000536509 EFCAB14O75071 495 aa12.97□□□□□ -0.33
LMO3-214ENST00000536509 TAP1Q03518 808 aa12.97□□□□□ -0.33
LMO3-214ENST00000536509 RBL2Q08999 1139 aa12.97□□□□□ -0.33
LMO3-214ENST00000536509 NMIQ13287 307 aaPredicted RBP12.97□□□□□ -0.33
LMO3-214ENST00000536509 DGKDQ16760 1214 aa12.97□□□□□ -0.33
LMO3-214ENST00000536509 ZNF589Q86UQ0 364 aaPredicted RBP12.97□□□□□ -0.33
LMO3-214ENST00000536509 PDCD7Q8N8D1 485 aaKnown RBP12.97□□□□□ -0.33
LMO3-214ENST00000536509 PNMA1Q8ND90 353 aa12.97□□□□□ -0.33
LMO3-214ENST00000536509 ANKS1AQ92625 1134 aa12.97□□□□□ -0.33
LMO3-214ENST00000536509 COPS5Q92905 334 aa12.97□□□□□ -0.33
LMO3-214ENST00000536509 EMID1Q96A84 441 aaPredicted RBP12.97□□□□□ -0.33
LMO3-214ENST00000536509 KAT14Q9H8E8 782 aa12.97□□□□□ -0.33
LMO3-214ENST00000536509 MAP3K20Q9NYL2 800 aaKnown RBP12.97□□□□□ -0.33
LMO3-214ENST00000536509 LMCD1Q9NZU5 365 aa12.97□□□□□ -0.33
LMO3-214ENST00000536509 MRPL11Q9Y3B7 192 aaKnown RBP12.97□□□□□ -0.33
LMO3-214ENST00000536509 PTPRSQ13332 1948 aa12.97□□□□□ -0.33
LMO3-214ENST00000536509 TLL1O43897 1013 aa12.96□□□□□ -0.33
LMO3-214ENST00000536509 MMP3P08254 477 aa12.96□□□□□ -0.33
LMO3-214ENST00000536509 SELPP16109 830 aa12.96□□□□□ -0.33
LMO3-214ENST00000536509 RRP1P56182 461 aaKnown RBP12.96□□□□□ -0.33
LMO3-214ENST00000536509 CDC37Q16543 378 aaPredicted RBP12.96□□□□□ -0.33
LMO3-214ENST00000536509 POTEHQ6S545 545 aa12.96□□□□□ -0.33
LMO3-214ENST00000536509 SEPT14Q6ZU15 432 aa12.96□□□□□ -0.33
LMO3-214ENST00000536509 TBC1D10CQ8IV04 446 aa12.96□□□□□ -0.33
LMO3-214ENST00000536509 SAMD3Q8N6K7 520 aa12.96□□□□□ -0.33
LMO3-214ENST00000536509 AFG1LQ8WV93 481 aa12.96□□□□□ -0.33
LMO3-214ENST00000536509 RMDN3Q96TC7 470 aa12.96□□□□□ -0.33
LMO3-214ENST00000536509 REV3LO60673 3130 aa12.95□□□□□ -0.34
LMO3-214ENST00000536509 ABHD14A-ACY1A0A1B0GW23 586 aa12.95□□□□□ -0.34
LMO3-214ENST00000536509 HIP1O00291 1037 aa12.95□□□□□ -0.34
LMO3-214ENST00000536509 EIF3JO75822 258 aaKnown RBP12.95□□□□□ -0.34
LMO3-214ENST00000536509 ARIH2O95376 493 aa12.95□□□□□ -0.34
LMO3-214ENST00000536509 GOLGA8HP0CJ92 632 aa12.95□□□□□ -0.34
LMO3-214ENST00000536509 ARHGAP1Q07960 439 aa12.95□□□□□ -0.34
LMO3-214ENST00000536509 TRAF1Q13077 416 aa12.95□□□□□ -0.34
LMO3-214ENST00000536509 LAMC2Q13753 1193 aa12.95□□□□□ -0.34
LMO3-214ENST00000536509 MFSD10Q14728 455 aa12.95□□□□□ -0.34
LMO3-214ENST00000536509 ARHGEF16Q5VV41 709 aa12.95□□□□□ -0.34
LMO3-214ENST00000536509 CNKSR3Q6P9H4 555 aa12.95□□□□□ -0.34
LMO3-214ENST00000536509 KCNV1Q6PIU1 500 aa12.95□□□□□ -0.34
LMO3-214ENST00000536509 LRRC8DQ7L1W4 858 aa12.95□□□□□ -0.34
LMO3-214ENST00000536509 FBXO11Q86XK2 927 aa12.95□□□□□ -0.34
LMO3-214ENST00000536509 ADGRF4Q8IZF3 695 aa12.95□□□□□ -0.34
LMO3-214ENST00000536509 C7orf31Q8N865 590 aa12.95□□□□□ -0.34
LMO3-214ENST00000536509 SYTL5Q8TDW5 730 aaPredicted RBP12.95□□□□□ -0.34
LMO3-214ENST00000536509 ARNTL2Q8WYA1 636 aa12.95□□□□□ -0.34
LMO3-214ENST00000536509 HLA-CQ95604 372 aa12.95□□□□□ -0.34
LMO3-214ENST00000536509 RILPL2Q969X0 211 aa12.95□□□□□ -0.34
LMO3-214ENST00000536509 DDX27Q96GQ7 796 aaKnown RBP12.95□□□□□ -0.34
LMO3-214ENST00000536509 GTF2IRD1Q9UHL9 959 aa12.95□□□□□ -0.34
LMO3-214ENST00000536509 SIP14410 1827 aa12.95□□□□□ -0.34
LMO3-214ENST00000536509 NEDD4P46934 1319 aa12.94□□□□□ -0.34
LMO3-214ENST00000536509 COL4A4P53420 1690 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms