RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 TGFB2P61812 414 aa4.52□□□□□ -1.69
SKA3-207ENST00000536239 AMPD2Q01433 879 aa4.52□□□□□ -1.69
SKA3-207ENST00000536239 CR1LQ2VPA4 569 aa4.52□□□□□ -1.69
SKA3-207ENST00000536239 FAM126BQ8IXS8 530 aa4.52□□□□□ -1.69
SKA3-207ENST00000536239 SEC14L1Q92503 715 aa4.52□□□□□ -1.69
SKA3-207ENST00000536239 DPF3Q92784 378 aa4.52□□□□□ -1.69
SKA3-207ENST00000536239 YTHDC1Q96MU7 727 aaKnown RBP4.52□□□□□ -1.69
SKA3-207ENST00000536239 KLHL25Q9H0H3 589 aa4.52□□□□□ -1.69
SKA3-207ENST00000536239 GBP3Q9H0R5 595 aa4.52□□□□□ -1.69
SKA3-207ENST00000536239 TMEM168Q9H0V1 697 aa4.52□□□□□ -1.69
SKA3-207ENST00000536239 NGRNQ9NPE2 291 aaKnown RBP4.52□□□□□ -1.69
SKA3-207ENST00000536239 JADE2Q9NQC1 790 aa4.52□□□□□ -1.69
SKA3-207ENST00000536239 MARCH2Q9P0N8 246 aa4.52□□□□□ -1.69
SKA3-207ENST00000536239 PPM1BO75688 479 aa4.51□□□□□ -1.69
SKA3-207ENST00000536239 STAT5AP42229 794 aa4.51□□□□□ -1.69
SKA3-207ENST00000536239 GRB10Q13322 594 aa4.51□□□□□ -1.69
SKA3-207ENST00000536239 FBXW10Q5XX13 1052 aa4.51□□□□□ -1.69
SKA3-207ENST00000536239 SLFN13Q68D06 897 aa4.51□□□□□ -1.69
SKA3-207ENST00000536239 HEATR6Q6AI08 1181 aaKnown RBP4.51□□□□□ -1.69
SKA3-207ENST00000536239 MILR1Q7Z6M3 343 aa4.51□□□□□ -1.69
SKA3-207ENST00000536239 ADAT2Q7Z6V5 191 aaKnown RBP4.51□□□□□ -1.69
SKA3-207ENST00000536239 KBTBD2Q8IY47 623 aa4.51□□□□□ -1.69
SKA3-207ENST00000536239 ARHGEF39Q8N4T4 335 aa4.51□□□□□ -1.69
SKA3-207ENST00000536239 MMP19Q99542 508 aa4.51□□□□□ -1.69
SKA3-207ENST00000536239 PTPN18Q99952 460 aa4.51□□□□□ -1.69
SKA3-207ENST00000536239 L2HGDHQ9H9P8 463 aa4.51□□□□□ -1.69
SKA3-207ENST00000536239 C11orf21Q9P2W6 132 aa4.51□□□□□ -1.69
SKA3-207ENST00000536239 CGGBP1Q9UFW8 167 aaPredicted RBP4.51□□□□□ -1.69
SKA3-207ENST00000536239 B4GALT4O60513 344 aa4.5□□□□□ -1.69
SKA3-207ENST00000536239 SLC6A11P48066 632 aa4.5□□□□□ -1.69
SKA3-207ENST00000536239 NKX3-2P78367 333 aa4.5□□□□□ -1.69
SKA3-207ENST00000536239 FHL2Q14192 279 aa4.5□□□□□ -1.69
SKA3-207ENST00000536239 GNPTABQ3T906 1256 aa4.5□□□□□ -1.69
SKA3-207ENST00000536239 MBLAC2Q68D91 279 aa4.5□□□□□ -1.69
SKA3-207ENST00000536239 Q8TCH9 128 aa4.5□□□□□ -1.69
SKA3-207ENST00000536239 RCC1LQ96I51 464 aaKnown RBP4.5□□□□□ -1.69
SKA3-207ENST00000536239 FGD4Q96M96 766 aa4.5□□□□□ -1.69
SKA3-207ENST00000536239 ZNF341Q9BYN7 854 aa4.5□□□□□ -1.69
SKA3-207ENST00000536239 CLEC1BQ9P126 229 aa4.5□□□□□ -1.69
SKA3-207ENST00000536239 C22orf46C9J442 243 aa4.49□□□□□ -1.69
SKA3-207ENST00000536239 EPHX1P07099 455 aa4.49□□□□□ -1.69
SKA3-207ENST00000536239 THBDP07204 575 aa4.49□□□□□ -1.69
SKA3-207ENST00000536239 TGM1P22735 817 aa4.49□□□□□ -1.69
SKA3-207ENST00000536239 MLLT6P55198 1093 aaPredicted RBP4.49□□□□□ -1.69
SKA3-207ENST00000536239 TEX2Q8IWB9 1127 aa4.49□□□□□ -1.69
SKA3-207ENST00000536239 PPT2Q9UMR5 302 aa4.49□□□□□ -1.69
SKA3-207ENST00000536239 NPIPB8E9PQR5 432 aa4.48□□□□□ -1.69
SKA3-207ENST00000536239 CYP7B1O75881 506 aa4.48□□□□□ -1.69
SKA3-207ENST00000536239 PLS3P13797 630 aa4.48□□□□□ -1.69
SKA3-207ENST00000536239 PURAQ00577 322 aaKnown RBP4.48□□□□□ -1.69
SKA3-207ENST00000536239 FOXE3Q13461 319 aa4.48□□□□□ -1.69
SKA3-207ENST00000536239 MRPL58Q14197 206 aaKnown RBP4.48□□□□□ -1.69
SKA3-207ENST00000536239 SMN1Q16637 294 aaKnown RBP4.48□□□□□ -1.69
SKA3-207ENST00000536239 KLHL36Q8N4N3 616 aa4.48□□□□□ -1.69
SKA3-207ENST00000536239 COPS5Q92905 334 aa4.48□□□□□ -1.69
SKA3-207ENST00000536239 ZSWIM3Q96MP5 696 aa4.48□□□□□ -1.69
SKA3-207ENST00000536239 CLIC6Q96NY7 704 aa4.48□□□□□ -1.69
SKA3-207ENST00000536239 YIPF4Q9BSR8 244 aa4.48□□□□□ -1.69
SKA3-207ENST00000536239 MEGF9Q9H1U4 602 aa4.48□□□□□ -1.69
SKA3-207ENST00000536239 GPRC5CQ9NQ84 441 aa4.48□□□□□ -1.69
SKA3-207ENST00000536239 BTG4Q9NY30 223 aa4.48□□□□□ -1.69
SKA3-207ENST00000536239 SLC12A7Q9Y666 1083 aa4.48□□□□□ -1.69
SKA3-207ENST00000536239 ERCC3P19447 782 aa4.47□□□□□ -1.69
SKA3-207ENST00000536239 SLC7A5Q01650 507 aa4.47□□□□□ -1.69
SKA3-207ENST00000536239 NFATC3Q12968 1075 aa4.47□□□□□ -1.69
SKA3-207ENST00000536239 INF2Q27J81 1249 aa4.47□□□□□ -1.69
SKA3-207ENST00000536239 MIIPQ5JXC2 388 aa4.47□□□□□ -1.69
SKA3-207ENST00000536239 MROH9Q5TGP6 573 aa4.47□□□□□ -1.69
SKA3-207ENST00000536239 RIOX2Q8IUF8 465 aa4.47□□□□□ -1.69
SKA3-207ENST00000536239 ZCCHC14Q8WYQ9 949 aaKnown RBP4.47□□□□□ -1.69
SKA3-207ENST00000536239 PHAXQ9H814 394 aaKnown RBP4.47□□□□□ -1.69
SKA3-207ENST00000536239 CROTQ9UKG9 612 aa4.47□□□□□ -1.69
SKA3-207ENST00000536239 PCDHB10Q9UN67 800 aa4.47□□□□□ -1.69
SKA3-207ENST00000536239 SUGT1Q9Y2Z0 365 aa4.47□□□□□ -1.69
SKA3-207ENST00000536239 ZDHHC9Q9Y397 364 aa4.47□□□□□ -1.69
SKA3-207ENST00000536239 INHBEP58166 350 aa4.46□□□□□ -1.7
SKA3-207ENST00000536239 SCRN1Q12765 414 aa4.46□□□□□ -1.7
SKA3-207ENST00000536239 ZNF575Q86XF7 245 aa4.46□□□□□ -1.7
SKA3-207ENST00000536239 CHFRQ96EP1 664 aa4.46□□□□□ -1.7
SKA3-207ENST00000536239 TOE1Q96GM8 510 aaKnown RBP4.46□□□□□ -1.7
SKA3-207ENST00000536239 BARX1Q9HBU1 254 aaPredicted RBP4.46□□□□□ -1.7
SKA3-207ENST00000536239 FTSJ1Q9UET6 329 aa4.46□□□□□ -1.7
SKA3-207ENST00000536239 X6R8D5 127 aa4.46□□□□□ -1.7
SKA3-207ENST00000536239 WDR33Q9C0J8 1336 aaKnown RBP4.46□□□□□ -1.7
SKA3-207ENST00000536239 FPR2P25090 351 aa4.45□□□□□ -1.7
SKA3-207ENST00000536239 PRKD1Q15139 912 aaPredicted RBP4.45□□□□□ -1.7
SKA3-207ENST00000536239 HS1BP3Q53T59 392 aa4.45□□□□□ -1.7
SKA3-207ENST00000536239 ZNF513Q8N8E2 541 aaPredicted RBP4.45□□□□□ -1.7
SKA3-207ENST00000536239 KLHL6Q8WZ60 621 aa4.45□□□□□ -1.7
SKA3-207ENST00000536239 ZNF503Q96F45 646 aa4.45□□□□□ -1.7
SKA3-207ENST00000536239 DTLQ9NZJ0 730 aa4.45□□□□□ -1.7
SKA3-207ENST00000536239 AKT3Q9Y243 479 aa4.45□□□□□ -1.7
SKA3-207ENST00000536239 A0A1W2PQH9 124 aa4.44□□□□□ -1.7
SKA3-207ENST00000536239 KCNH1O95259 989 aa4.44□□□□□ -1.7
SKA3-207ENST00000536239 RPL11P62913 178 aaKnown RBP4.44□□□□□ -1.7
SKA3-207ENST00000536239 ABHD18Q0P651 414 aa4.44□□□□□ -1.7
SKA3-207ENST00000536239 IGFL4Q6B9Z1 124 aa4.44□□□□□ -1.7
SKA3-207ENST00000536239 TRMT10BQ6PF06 316 aaKnown RBP4.44□□□□□ -1.7
SKA3-207ENST00000536239 TEPPQ6URK8 271 aa4.44□□□□□ -1.7
SKA3-207ENST00000536239 RNF207Q6ZRF8 634 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms