RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.48□□□□□ -1.37
VPS33A-203ENST00000536212 PLCH1Q4KWH8 1693 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 MYH3P11055 1940 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 TNKSO95271 1327 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 CICQ96RK0 1608 aaPredicted RBP6.47□□□□□ -1.37
VPS33A-203ENST00000536212 SNAP23O00161 211 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 ORC4O43929 436 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 MFAP3LO75121 409 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 CCDC175P0C221 793 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 CYP2C19P33261 490 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 TRAPPC10P48553 1259 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 NT5C2P49902 561 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 ADKP55263 362 aaKnown RBP6.47□□□□□ -1.37
VPS33A-203ENST00000536212 TUBB4BP68371 445 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 AKAP17AQ02040 695 aaKnown RBP6.47□□□□□ -1.37
VPS33A-203ENST00000536212 CHRNDQ07001 517 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 TROAPQ12815 778 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 UBE4AQ14139 1066 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 GAS6Q14393 721 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 BRD3Q15059 726 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 ZNF827Q17R98 1081 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 EARS2Q5JPH6 523 aaKnown RBP6.47□□□□□ -1.37
VPS33A-203ENST00000536212 RRP12Q5JTH9 1297 aaKnown RBP6.47□□□□□ -1.37
VPS33A-203ENST00000536212 JAKMIP3Q5VZ66 844 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 CC2D1AQ6P1N0 951 aaPredicted RBP6.47□□□□□ -1.37
VPS33A-203ENST00000536212 RAD9BQ6WBX8 426 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 TMTC3Q6ZXV5 915 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 RASGRP2Q7LDG7 609 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 GRAMD1CQ8IYS0 662 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 ENAHQ8N8S7 591 aaPredicted RBP6.47□□□□□ -1.37
VPS33A-203ENST00000536212 NUP133Q8WUM0 1156 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 SCG3Q8WXD2 468 aaKnown RBP6.47□□□□□ -1.37
VPS33A-203ENST00000536212 C8orf37Q96NL8 207 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 CTAGE1Q96RT6 745 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 ZSCAN10Q96SZ4 725 aaPredicted RBP6.47□□□□□ -1.37
VPS33A-203ENST00000536212 ZKSCAN3Q9BRR0 538 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 MRPL44Q9H9J2 332 aaKnown RBP6.47□□□□□ -1.37
VPS33A-203ENST00000536212 CCDC87Q9NVE4 849 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 VPS54Q9P1Q0 977 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 LRP2BPQ9P2M1 347 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 BIN2Q9UBW5 565 aaPredicted RBP6.47□□□□□ -1.37
VPS33A-203ENST00000536212 LIMA1Q9UHB6 759 aaKnown RBP6.47□□□□□ -1.37
VPS33A-203ENST00000536212 ITGB4P16144 1822 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 DUOX1Q9NRD9 1551 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 PDS5AQ29RF7 1337 aaKnown RBP6.47□□□□□ -1.37
VPS33A-203ENST00000536212 SYNRGQ9UMZ2 1314 aa6.47□□□□□ -1.37
VPS33A-203ENST00000536212 NUP98P52948 1817 aa6.46□□□□□ -1.37
VPS33A-203ENST00000536212 CCDC66A2RUB6 948 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 EXOC5O00471 708 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 NPHP1O15259 732 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 TEX33O43247 280 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 PLEKHA8P1O95397 391 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 TBC1D8O95759 1140 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 ADH1AP07327 375 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 EPHA4P54764 986 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 SPAG1Q07617 926 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 RBL2Q08999 1139 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 CBLBQ13191 982 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 ZNF211Q13398 564 aaPredicted RBP6.46□□□□□ -1.38
VPS33A-203ENST00000536212 TRIM14Q14142 442 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 SF3B3Q15393 1217 aaKnown RBP6.46□□□□□ -1.38
VPS33A-203ENST00000536212 FILIP1LQ4L180 1135 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 SBK1Q52WX2 424 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 TTC38Q5R3I4 469 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 PODNQ7Z5L7 613 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 SRGAP1Q7Z6B7 1085 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 CATIPQ7Z7H3 387 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 ADGRA1Q86SQ6 560 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 PPFIBP1Q86W92 1011 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 PDILTQ8N807 584 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 IGSF22Q8N9C0 903 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 MIGA1Q8NAN2 632 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 MSANTD4Q8NCY6 345 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 HNRNPLLQ8WVV9 542 aaKnown RBP6.46□□□□□ -1.38
VPS33A-203ENST00000536212 ANKS1AQ92625 1134 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 GOLGA1Q92805 767 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 COL26A1Q96A83 441 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 DHX58Q96C10 678 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 EPSTI1Q96J88 318 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 TSPAN10Q9H1Z9 355 aaPredicted RBP6.46□□□□□ -1.38
VPS33A-203ENST00000536212 ARHGEF10LQ9HCE6 1279 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 BRMS1Q9HCU9 246 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 ST7Q9NRC1 585 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 RAB6BQ9NRW1 208 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 TOMM22Q9NS69 142 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 GNL3LQ9NVN8 582 aaKnown RBP6.46□□□□□ -1.38
VPS33A-203ENST00000536212 BTG4Q9NY30 223 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.46□□□□□ -1.38
VPS33A-203ENST00000536212 RWDD2AQ9UIY3 292 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 CDC23Q9UJX2 597 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 RAB21Q9UL25 225 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 MYO5AQ9Y4I1 1855 aaKnown RBP6.46□□□□□ -1.38
VPS33A-203ENST00000536212 COL1A1P02452 1464 aaPredicted RBP6.46□□□□□ -1.38
VPS33A-203ENST00000536212 XDHP47989 1333 aa6.46□□□□□ -1.38
VPS33A-203ENST00000536212 LAMB2P55268 1798 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 COL14A1Q05707 1796 aaKnown RBP6.45□□□□□ -1.38
VPS33A-203ENST00000536212 CCDC151A5D8V7 595 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 ANKRD33BA6NCL7 494 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 H3BRB1 525 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 MAP2K7O14733 419 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms