RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 MBOAT7Q96N66 472 aa18.46■□□□□ 0.55
VAMP1-205ENST00000535927 POLR3EQ9NVU0 708 aa18.46■□□□□ 0.55
VAMP1-205ENST00000535927 TNRC18O15417 2968 aaPredicted RBP18.45■□□□□ 0.54
VAMP1-205ENST00000535927 SOWAHBA6NEL2 793 aa18.45■□□□□ 0.54
VAMP1-205ENST00000535927 COBLO75128 1261 aa18.45■□□□□ 0.54
VAMP1-205ENST00000535927 TGFB3P10600 412 aa18.45■□□□□ 0.54
VAMP1-205ENST00000535927 ZNF76P36508 570 aa18.45■□□□□ 0.54
VAMP1-205ENST00000535927 CNTN2Q02246 1040 aa18.45■□□□□ 0.54
VAMP1-205ENST00000535927 PDE4DQ08499 809 aa18.45■□□□□ 0.54
VAMP1-205ENST00000535927 CSPP1Q1MSJ5 1256 aa18.45■□□□□ 0.54
VAMP1-205ENST00000535927 Q4G0T1 1027 aa18.45■□□□□ 0.54
VAMP1-205ENST00000535927 CEP55Q53EZ4 464 aa18.45■□□□□ 0.54
VAMP1-205ENST00000535927 TTC38Q5R3I4 469 aa18.45■□□□□ 0.54
VAMP1-205ENST00000535927 NLRX1Q86UT6 975 aa18.45■□□□□ 0.54
VAMP1-205ENST00000535927 ZNF296Q8WUU4 475 aaPredicted RBP18.45■□□□□ 0.54
VAMP1-205ENST00000535927 SCAND2PQ9GZW5 306 aaPredicted RBP18.45■□□□□ 0.54
VAMP1-205ENST00000535927 SRRDQ9UH36 339 aa18.45■□□□□ 0.54
VAMP1-205ENST00000535927 MEIS1O00470 390 aa18.44■□□□□ 0.54
VAMP1-205ENST00000535927 KRT85P78386 507 aa18.44■□□□□ 0.54
VAMP1-205ENST00000535927 PXYLP1Q8TE99 480 aa18.44■□□□□ 0.54
VAMP1-205ENST00000535927 GPRASP2Q96D09 838 aa18.44■□□□□ 0.54
VAMP1-205ENST00000535927 MAML3Q96JK9 1138 aa18.44■□□□□ 0.54
VAMP1-205ENST00000535927 MXRA8Q9BRK3 442 aa18.44■□□□□ 0.54
VAMP1-205ENST00000535927 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.44■□□□□ 0.54
VAMP1-205ENST00000535927 RTEL1Q9NZ71 1219 aa18.44■□□□□ 0.54
VAMP1-205ENST00000535927 UBIAD1Q9Y5Z9 338 aa18.44■□□□□ 0.54
VAMP1-205ENST00000535927 MYH15Q9Y2K3 1946 aa18.43■□□□□ 0.54
VAMP1-205ENST00000535927 BAG4O95429 457 aaKnown RBP18.43■□□□□ 0.54
VAMP1-205ENST00000535927 YEATS4O95619 227 aa18.43■□□□□ 0.54
VAMP1-205ENST00000535927 PGK2P07205 417 aa18.43■□□□□ 0.54
VAMP1-205ENST00000535927 EIF2AK2P19525 551 aaKnown RBP18.43■□□□□ 0.54
VAMP1-205ENST00000535927 TOB1P50616 345 aaPredicted RBP18.43■□□□□ 0.54
VAMP1-205ENST00000535927 LETM2Q2VYF4 491 aa18.43■□□□□ 0.54
VAMP1-205ENST00000535927 ARL6IP4Q66PJ3 421 aaKnown RBP18.43■□□□□ 0.54
VAMP1-205ENST00000535927 FAM20AQ96MK3 541 aa18.43■□□□□ 0.54
VAMP1-205ENST00000535927 INPP4AQ96PE3 977 aaPredicted RBP18.43■□□□□ 0.54
VAMP1-205ENST00000535927 TINF2Q9BSI4 451 aa18.43■□□□□ 0.54
VAMP1-205ENST00000535927 ABHD16BQ9H3Z7 469 aa18.43■□□□□ 0.54
VAMP1-205ENST00000535927 VTA1Q9NP79 307 aa18.43■□□□□ 0.54
VAMP1-205ENST00000535927 LCTP09848 1927 aa18.43■□□□□ 0.54
VAMP1-205ENST00000535927 ADAMTS3O15072 1205 aa18.42■□□□□ 0.54
VAMP1-205ENST00000535927 CCNT1O60563 726 aaKnown RBP18.42■□□□□ 0.54
VAMP1-205ENST00000535927 IGHA2P01877 340 aa18.42■□□□□ 0.54
VAMP1-205ENST00000535927 ICAM3P32942 547 aa18.42■□□□□ 0.54
VAMP1-205ENST00000535927 PRPHP41219 470 aa18.42■□□□□ 0.54
VAMP1-205ENST00000535927 NASPP49321 788 aaPredicted RBP18.42■□□□□ 0.54
VAMP1-205ENST00000535927 FLT3LGP49771 235 aa18.42■□□□□ 0.54
VAMP1-205ENST00000535927 EARS2Q5JPH6 523 aaKnown RBP18.42■□□□□ 0.54
VAMP1-205ENST00000535927 ANO1Q5XXA6 986 aa18.42■□□□□ 0.54
VAMP1-205ENST00000535927 SLFN12Q8IYM2 578 aa18.42■□□□□ 0.54
VAMP1-205ENST00000535927 GIMAP8Q8ND71 665 aaPredicted RBP18.42■□□□□ 0.54
VAMP1-205ENST00000535927 JADE2Q9NQC1 790 aa18.42■□□□□ 0.54
VAMP1-205ENST00000535927 DDX25Q9UHL0 483 aaKnown RBP18.42■□□□□ 0.54
VAMP1-205ENST00000535927 CTGFP29279 349 aa18.41■□□□□ 0.54
VAMP1-205ENST00000535927 SLC39A14Q15043 492 aa18.41■□□□□ 0.54
VAMP1-205ENST00000535927 MFSD14CQ5VZR4 134 aa18.41■□□□□ 0.54
VAMP1-205ENST00000535927 ARMCX2Q7L311 632 aa18.41■□□□□ 0.54
VAMP1-205ENST00000535927 CD99L2Q8TCZ2 262 aa18.41■□□□□ 0.54
VAMP1-205ENST00000535927 KCNG4Q8TDN1 519 aa18.41■□□□□ 0.54
VAMP1-205ENST00000535927 FGD4Q96M96 766 aa18.41■□□□□ 0.54
VAMP1-205ENST00000535927 GBP4Q96PP9 640 aa18.41■□□□□ 0.54
VAMP1-205ENST00000535927 SENP7Q9BQF6 1050 aa18.41■□□□□ 0.54
VAMP1-205ENST00000535927 STK24Q9Y6E0 443 aa18.41■□□□□ 0.54
VAMP1-205ENST00000535927 FIBPO43427 364 aa18.4■□□□□ 0.54
VAMP1-205ENST00000535927 NEMFO60524 1076 aa18.4■□□□□ 0.54
VAMP1-205ENST00000535927 PPP6R2O75170 966 aa18.4■□□□□ 0.54
VAMP1-205ENST00000535927 MYCLP12524 364 aaPredicted RBP18.4■□□□□ 0.54
VAMP1-205ENST00000535927 MRPS9P82933 396 aaKnown RBP18.4■□□□□ 0.54
VAMP1-205ENST00000535927 PKN2Q16513 984 aaKnown RBP18.4■□□□□ 0.54
VAMP1-205ENST00000535927 NPLOC4Q8TAT6 608 aa18.4■□□□□ 0.54
VAMP1-205ENST00000535927 TNPO1Q92973 898 aaKnown RBP18.4■□□□□ 0.54
VAMP1-205ENST00000535927 FERMT2Q96AC1 680 aa18.4■□□□□ 0.54
VAMP1-205ENST00000535927 PGBD1Q96JS3 809 aa18.4■□□□□ 0.54
VAMP1-205ENST00000535927 TBC1D22BQ9NU19 505 aa18.4■□□□□ 0.54
VAMP1-205ENST00000535927 RCOR1Q9UKL0 485 aa18.4■□□□□ 0.54
VAMP1-205ENST00000535927 CNPY2Q9Y2B0 182 aa18.4■□□□□ 0.54
VAMP1-205ENST00000535927 TCHHQ07283 1943 aa18.4■□□□□ 0.54
VAMP1-205ENST00000535927 KIAA1217Q5T5P2 1943 aa18.4■□□□□ 0.54
VAMP1-205ENST00000535927 IGLV3-22A0A075B6J6 115 aa18.39■□□□□ 0.53
VAMP1-205ENST00000535927 RBM47A0AV96 593 aaKnown RBP18.39■□□□□ 0.53
VAMP1-205ENST00000535927 SPATA31C2B4DYI2 1134 aa18.39■□□□□ 0.53
VAMP1-205ENST00000535927 NKRFO15226 690 aaKnown RBP eCLIP18.39■□□□□ 0.53
VAMP1-205ENST00000535927 EDIL3O43854 480 aa18.39■□□□□ 0.53
VAMP1-205ENST00000535927 CYP2B6P20813 491 aa18.39■□□□□ 0.53
VAMP1-205ENST00000535927 SOX10P56693 466 aa18.39■□□□□ 0.53
VAMP1-205ENST00000535927 FOXD4L5Q5VV16 416 aaPredicted RBP18.39■□□□□ 0.53
VAMP1-205ENST00000535927 IQSEC1Q6DN90 963 aa18.39■□□□□ 0.53
VAMP1-205ENST00000535927 PLA2G4DQ86XP0 818 aa18.39■□□□□ 0.53
VAMP1-205ENST00000535927 SLAIN1Q8ND83 568 aa18.39■□□□□ 0.53
VAMP1-205ENST00000535927 SCFD2Q8WU76 684 aa18.39■□□□□ 0.53
VAMP1-205ENST00000535927 FOXD4L4Q8WXT5 416 aaPredicted RBP18.39■□□□□ 0.53
VAMP1-205ENST00000535927 RIT2Q99578 217 aa18.39■□□□□ 0.53
VAMP1-205ENST00000535927 RAB34Q9BZG1 259 aa18.39■□□□□ 0.53
VAMP1-205ENST00000535927 ARHGAP39Q9C0H5 1083 aa18.39■□□□□ 0.53
VAMP1-205ENST00000535927 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.39■□□□□ 0.53
VAMP1-205ENST00000535927 PCDHB6Q9Y5E3 794 aa18.39■□□□□ 0.53
VAMP1-205ENST00000535927 FAM205CA6NFA0 338 aa18.38■□□□□ 0.53
VAMP1-205ENST00000535927 FAM86B1E9PN63 330 aa18.38■□□□□ 0.53
VAMP1-205ENST00000535927 MARCH6O60337 910 aa18.38■□□□□ 0.53
VAMP1-205ENST00000535927 FAM86B2P0C5J1 330 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms