RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 ALDH5A1P51649 535 aaPredicted RBP9.89□□□□□ -0.83
CLIP1-206ENST00000535290 RARSP54136 660 aaKnown RBP9.89□□□□□ -0.83
CLIP1-206ENST00000535290 BAATQ14032 418 aaPredicted RBP9.89□□□□□ -0.83
CLIP1-206ENST00000535290 CBX2Q14781 532 aaPredicted RBP9.89□□□□□ -0.83
CLIP1-206ENST00000535290 PPP2R5BQ15173 497 aa9.89□□□□□ -0.83
CLIP1-206ENST00000535290 TRIM71Q2Q1W2 868 aaKnown RBP9.89□□□□□ -0.83
CLIP1-206ENST00000535290 ZNF618Q5T7W0 954 aa9.89□□□□□ -0.83
CLIP1-206ENST00000535290 GMCL1P1Q8NEA9 526 aa9.89□□□□□ -0.83
CLIP1-206ENST00000535290 KAT2BQ92831 832 aa9.89□□□□□ -0.83
CLIP1-206ENST00000535290 CEP95Q96GE4 821 aa9.89□□□□□ -0.83
CLIP1-206ENST00000535290 MSLNLQ96KJ4 702 aa9.89□□□□□ -0.83
CLIP1-206ENST00000535290 YME1L1Q96TA2 773 aa9.89□□□□□ -0.83
CLIP1-206ENST00000535290 DNAJC2Q99543 621 aaKnown RBP9.89□□□□□ -0.83
CLIP1-206ENST00000535290 C1orf115Q9H7X2 142 aa9.89□□□□□ -0.83
CLIP1-206ENST00000535290 ISY1Q9ULR0 285 aaKnown RBP9.89□□□□□ -0.83
CLIP1-206ENST00000535290 SLC4A4Q9Y6R1 1079 aa9.89□□□□□ -0.83
CLIP1-206ENST00000535290 CHD8Q9HCK8 2581 aa9.89□□□□□ -0.83
CLIP1-206ENST00000535290 RAD50Q92878 1312 aa9.88□□□□□ -0.83
CLIP1-206ENST00000535290 KMT2EQ8IZD2 1858 aa9.88□□□□□ -0.83
CLIP1-206ENST00000535290 NKRFO15226 690 aaKnown RBP eCLIP9.88□□□□□ -0.83
CLIP1-206ENST00000535290 GALR2O43603 387 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-206ENST00000535290 UPP2O95045 317 aa9.88□□□□□ -0.83
CLIP1-206ENST00000535290 CSPG5O95196 566 aa9.88□□□□□ -0.83
CLIP1-206ENST00000535290 EYA4O95677 639 aa9.88□□□□□ -0.83
CLIP1-206ENST00000535290 ADD2P35612 726 aa9.88□□□□□ -0.83
CLIP1-206ENST00000535290 STAT2P52630 851 aa9.88□□□□□ -0.83
CLIP1-206ENST00000535290 ADAM15Q13444 863 aa9.88□□□□□ -0.83
CLIP1-206ENST00000535290 TRMT2AQ8IZ69 625 aaKnown RBP9.88□□□□□ -0.83
CLIP1-206ENST00000535290 MIER1Q8N108 512 aa9.88□□□□□ -0.83
CLIP1-206ENST00000535290 ADSSL1Q8N142 457 aa9.88□□□□□ -0.83
CLIP1-206ENST00000535290 AFG1LQ8WV93 481 aa9.88□□□□□ -0.83
CLIP1-206ENST00000535290 STAG1Q8WVM7 1258 aa9.88□□□□□ -0.83
CLIP1-206ENST00000535290 CLUAP1Q96AJ1 413 aa9.88□□□□□ -0.83
CLIP1-206ENST00000535290 DDRGK1Q96HY6 314 aa9.88□□□□□ -0.83
CLIP1-206ENST00000535290 MKNK2Q9HBH9 465 aa9.88□□□□□ -0.83
CLIP1-206ENST00000535290 MTMR4Q9NYA4 1195 aa9.88□□□□□ -0.83
CLIP1-206ENST00000535290 HDAC6Q9UBN7 1215 aa9.88□□□□□ -0.83
CLIP1-206ENST00000535290 SPTBN2O15020 2390 aa9.88□□□□□ -0.83
CLIP1-206ENST00000535290 PRDM1O75626 825 aa9.87□□□□□ -0.83
CLIP1-206ENST00000535290 GABBR2O75899 941 aa9.87□□□□□ -0.83
CLIP1-206ENST00000535290 ARIH2O95376 493 aa9.87□□□□□ -0.83
CLIP1-206ENST00000535290 CT47B1P0C2W7 299 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-206ENST00000535290 TXNP10599 105 aaKnown RBP9.87□□□□□ -0.83
CLIP1-206ENST00000535290 PRKCSHP14314 528 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-206ENST00000535290 NDUFV1P49821 464 aa9.87□□□□□ -0.83
CLIP1-206ENST00000535290 RRP1P56182 461 aaKnown RBP9.87□□□□□ -0.83
CLIP1-206ENST00000535290 ZNF200P98182 395 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-206ENST00000535290 IKQ13123 557 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-206ENST00000535290 FRMD5Q7Z6J6 570 aa9.87□□□□□ -0.83
CLIP1-206ENST00000535290 FAM160B2Q86V87 743 aa9.87□□□□□ -0.83
CLIP1-206ENST00000535290 PLCD3Q8N3E9 789 aa9.87□□□□□ -0.83
CLIP1-206ENST00000535290 SCFD2Q8WU76 684 aa9.87□□□□□ -0.83
CLIP1-206ENST00000535290 CHURC1Q8WUH1 139 aa9.87□□□□□ -0.83
CLIP1-206ENST00000535290 NKD2Q969F2 451 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-206ENST00000535290 TOP1MTQ969P6 601 aa9.87□□□□□ -0.83
CLIP1-206ENST00000535290 RPGRIP1Q96KN7 1286 aa9.87□□□□□ -0.83
CLIP1-206ENST00000535290 IL1RAPL2Q9NP60 686 aa9.87□□□□□ -0.83
CLIP1-206ENST00000535290 INCENPQ9NQS7 918 aa9.87□□□□□ -0.83
CLIP1-206ENST00000535290 CLEC1BQ9P126 229 aa9.87□□□□□ -0.83
CLIP1-206ENST00000535290 ADD3Q9UEY8 706 aaKnown RBP9.87□□□□□ -0.83
CLIP1-206ENST00000535290 GTF2IRD1Q9UHL9 959 aa9.87□□□□□ -0.83
CLIP1-206ENST00000535290 CCPG1Q9ULG6 757 aa9.87□□□□□ -0.83
CLIP1-206ENST00000535290 BAZ2AQ9UIF9 1905 aaKnown RBP9.87□□□□□ -0.83
CLIP1-206ENST00000535290 MYH8P13535 1937 aa9.86□□□□□ -0.83
CLIP1-206ENST00000535290 NFIBO00712 420 aa9.86□□□□□ -0.83
CLIP1-206ENST00000535290 TTLL1O95922 423 aa9.86□□□□□ -0.83
CLIP1-206ENST00000535290 MMP3P08254 477 aa9.86□□□□□ -0.83
CLIP1-206ENST00000535290 LINC00271P0C7V0 271 aa9.86□□□□□ -0.83
CLIP1-206ENST00000535290 MCCP23508 829 aa9.86□□□□□ -0.83
CLIP1-206ENST00000535290 CTNNB1P35222 781 aa9.86□□□□□ -0.83
CLIP1-206ENST00000535290 SLC1A4P43007 532 aa9.86□□□□□ -0.83
CLIP1-206ENST00000535290 NUBP1P53384 320 aa9.86□□□□□ -0.83
CLIP1-206ENST00000535290 PDE4BQ07343 736 aa9.86□□□□□ -0.83
CLIP1-206ENST00000535290 PTK7Q13308 1070 aa9.86□□□□□ -0.83
CLIP1-206ENST00000535290 CAMK1Q14012 370 aa9.86□□□□□ -0.83
CLIP1-206ENST00000535290 HIC1Q14526 733 aa9.86□□□□□ -0.83
CLIP1-206ENST00000535290 KCTD1Q719H9 257 aa9.86□□□□□ -0.83
CLIP1-206ENST00000535290 SMRP1Q8NCR6 262 aa9.86□□□□□ -0.83
CLIP1-206ENST00000535290 RMDN1Q96DB5 314 aa9.86□□□□□ -0.83
CLIP1-206ENST00000535290 CNTNAP3BQ96NU0 1288 aa9.86□□□□□ -0.83
CLIP1-206ENST00000535290 CNTNAP3Q9BZ76 1288 aa9.86□□□□□ -0.83
CLIP1-206ENST00000535290 OSBPL7Q9BZF2 842 aa9.86□□□□□ -0.83
CLIP1-206ENST00000535290 PUS7LQ9H0K6 701 aaKnown RBP9.86□□□□□ -0.83
CLIP1-206ENST00000535290 ARPP21Q9UBL0 812 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-206ENST00000535290 PRR12Q9ULL5 1215 aa9.86□□□□□ -0.83
CLIP1-206ENST00000535290 SYNPO2Q9UMS6 1093 aa9.86□□□□□ -0.83
CLIP1-206ENST00000535290 EXOC6BQ9Y2D4 811 aa9.86□□□□□ -0.83
CLIP1-206ENST00000535290 USP15Q9Y4E8 981 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-206ENST00000535290 CEP250Q9BV73 2442 aa9.86□□□□□ -0.83
CLIP1-206ENST00000535290 GREB1LQ9C091 1923 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-206ENST00000535290 KMT2BQ9UMN6 2715 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-206ENST00000535290 LOC102724159A0A0B4J2E5 919 aa9.85□□□□□ -0.83
CLIP1-206ENST00000535290 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-206ENST00000535290 PTPDC1A2A3K4 754 aa9.85□□□□□ -0.83
CLIP1-206ENST00000535290 MINDY4BA8MYZ0 360 aa9.85□□□□□ -0.83
CLIP1-206ENST00000535290 C5orf67F2Z3F1 127 aa9.85□□□□□ -0.83
CLIP1-206ENST00000535290 RB1P06400 928 aa9.85□□□□□ -0.83
CLIP1-206ENST00000535290 EDNRBP24530 442 aa9.85□□□□□ -0.83
CLIP1-206ENST00000535290 ICAM3P32942 547 aa9.85□□□□□ -0.83
CLIP1-206ENST00000535290 BMPR1AP36894 532 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms