RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 CSTF2P33240 577 aaKnown RBP eCLIP5.79□□□□□ -1.48
SNHG1-201ENST00000535076 PSMC4P43686 418 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 TPD52P55327 224 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-201ENST00000535076 OXCT1P55809 520 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 BASP1P80723 227 aaKnown RBP5.79□□□□□ -1.48
SNHG1-201ENST00000535076 CDK17Q00537 523 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 IFFO1Q0D2I5 559 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 TRIM28Q13263 835 aaKnown RBP5.79□□□□□ -1.48
SNHG1-201ENST00000535076 DRP2Q13474 957 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 DHX8Q14562 1220 aaKnown RBP5.79□□□□□ -1.48
SNHG1-201ENST00000535076 SMC1AQ14683 1233 aaKnown RBP5.79□□□□□ -1.48
SNHG1-201ENST00000535076 KCNB1Q14721 858 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 SPCS2Q15005 226 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 RABL6Q3YEC7 729 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-201ENST00000535076 CCDC153Q494R4 210 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 PABPC1LQ4VXU2 614 aaKnown RBP5.79□□□□□ -1.48
SNHG1-201ENST00000535076 ARMC3Q5W041 872 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 ELMSAN1Q6PJG2 1045 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 NCCRP1Q6ZVX7 275 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-201ENST00000535076 DPH6Q7L8W6 267 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 ZNF804AQ7Z570 1209 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 SESTD1Q86VW0 696 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 SKAP1Q86WV1 359 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 SYT2Q8N9I0 419 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-201ENST00000535076 NGDNQ8NEJ9 315 aaKnown RBP5.79□□□□□ -1.48
SNHG1-201ENST00000535076 RASSF8Q8NHQ8 419 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 DIS3LQ8TF46 1054 aaKnown RBP5.79□□□□□ -1.48
SNHG1-201ENST00000535076 GIPC2Q8TF65 315 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.79□□□□□ -1.48
SNHG1-201ENST00000535076 ZNF75CPQ92670 426 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-201ENST00000535076 KAT2BQ92831 832 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 SPAG5Q96R06 1193 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 CTAGE1Q96RT6 745 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 SMC6Q96SB8 1091 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.79□□□□□ -1.489e-34■■■■□ 19.3
SNHG1-201ENST00000535076 FAM167BQ9BTA0 163 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 MOV10L1Q9BXT6 1211 aaKnown RBP5.79□□□□□ -1.48
SNHG1-201ENST00000535076 CLK4Q9HAZ1 481 aaKnown RBP5.79□□□□□ -1.48
SNHG1-201ENST00000535076 TPSG1Q9NRR2 321 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 STK39Q9UEW8 545 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 IP6K2Q9UHH9 426 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 FAM184BQ9ULE4 1060 aa5.79□□□□□ -1.48
SNHG1-201ENST00000535076 GAKO14976 1311 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 CCDC88BA6NC98 1476 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 LOC102724428A0A0B4J2F2 783 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 A6NHS1 94 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 SLC26A4O43511 780 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 KPNA6O60684 536 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 PDGFRBP09619 1106 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 PARP1P09874 1014 aaKnown RBP5.78□□□□□ -1.48
SNHG1-201ENST00000535076 ELNP15502 786 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 ATP5JP18859 108 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 BTF3P20290 206 aaKnown RBP5.78□□□□□ -1.48
SNHG1-201ENST00000535076 S100A1P23297 94 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 CNGA1P29973 690 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 KIF5BP33176 963 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 CA8P35219 290 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 GATA4P43694 442 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 SIK1P57059 783 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 TUBB4BP68371 445 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 UBXN2AP68543 259 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 ST5P78524 1137 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 ITIH3Q06033 890 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 BYSLQ13895 437 aaKnown RBP5.78□□□□□ -1.48
SNHG1-201ENST00000535076 SEPT6Q14141 434 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 MBTPS1Q14703 1052 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 ENOX2Q16206 610 aaKnown RBP5.78□□□□□ -1.48
SNHG1-201ENST00000535076 LONRF1Q17RB8 773 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 RSPO4Q2I0M5 234 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-201ENST00000535076 CFAP58Q5T655 872 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 VPS53Q5VIR6 699 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 EGFLAMQ63HQ2 1017 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 KAZNQ674X7 775 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 CCSAPQ6IQ19 270 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-201ENST00000535076 TMC6Q7Z403 805 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 ITPRIPQ8IWB1 547 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 CARNMT1Q8N4J0 409 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 DCLK2Q8N568 766 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 TEX9Q8N6V9 391 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 CCDC89Q8N998 374 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 OR13H1Q8NG92 308 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 GSDMBQ8TAX9 411 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 WDR66Q8TBY9 1149 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 CCDC110Q8TBZ0 833 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 BRSK1Q8TDC3 778 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 HELQQ8TDG4 1101 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 GTF3C2Q8WUA4 911 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-201ENST00000535076 TTC9Q92623 222 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 CDKL2Q92772 493 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 DPF3Q92784 378 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 PLD4Q96BZ4 506 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 CFAP36Q96G28 342 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 ZNF496Q96IT1 587 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-201ENST00000535076 HAUS7Q99871 368 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 L2HGDHQ9H9P8 463 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 HELLSQ9NRZ9 838 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 PDRG1Q9NUG6 133 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 ATXN10Q9UBB4 475 aa5.78□□□□□ -1.48
SNHG1-201ENST00000535076 PPP1R1BQ9UD71 204 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-201ENST00000535076 PGAP2Q9UHJ9 254 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms