RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 ADORA2AP29274 412 aa13.95□□□□□ -0.18
SCARB1-204ENST00000535005 FCGRTP55899 365 aa13.95□□□□□ -0.18
SCARB1-204ENST00000535005 ARHGAP4P98171 946 aa13.95□□□□□ -0.18
SCARB1-204ENST00000535005 CNTN2Q02246 1040 aa13.95□□□□□ -0.18
SCARB1-204ENST00000535005 INF2Q27J81 1249 aa13.95□□□□□ -0.18
SCARB1-204ENST00000535005 ZNF792Q3KQV3 632 aa13.95□□□□□ -0.18
SCARB1-204ENST00000535005 FAM173BQ6P4H8 233 aa13.95□□□□□ -0.18
SCARB1-204ENST00000535005 MOXD1Q6UVY6 613 aa13.95□□□□□ -0.18
SCARB1-204ENST00000535005 NEK8Q86SG6 692 aa13.95□□□□□ -0.18
SCARB1-204ENST00000535005 USP6NLQ92738 828 aa13.95□□□□□ -0.18
SCARB1-204ENST00000535005 IWS1Q96ST2 819 aa13.95□□□□□ -0.18
SCARB1-204ENST00000535005 NAP1L4Q99733 375 aaKnown RBP13.95□□□□□ -0.18
SCARB1-204ENST00000535005 PDCD2LQ9BRP1 358 aa13.95□□□□□ -0.18
SCARB1-204ENST00000535005 BEGAINQ9BUH8 593 aa13.95□□□□□ -0.18
SCARB1-204ENST00000535005 ZNF236Q9UL36 1845 aa13.95□□□□□ -0.18
SCARB1-204ENST00000535005 TNPO2O14787 897 aaKnown RBP13.94□□□□□ -0.18
SCARB1-204ENST00000535005 COBLO75128 1261 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 HOXC6P09630 235 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 CTGFP29279 349 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 CIITAP33076 1130 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 ORC2Q13416 577 aaPredicted RBP13.94□□□□□ -0.18
SCARB1-204ENST00000535005 CCDC183Q5T5S1 534 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 ZNF467Q7Z7K2 595 aaPredicted RBP13.94□□□□□ -0.18
SCARB1-204ENST00000535005 JMYQ8N9B5 988 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 FGD4Q96M96 766 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 ZNF396Q96N95 335 aaPredicted RBP13.94□□□□□ -0.18
SCARB1-204ENST00000535005 PURBQ96QR8 312 aaKnown RBP13.94□□□□□ -0.18
SCARB1-204ENST00000535005 GJD2Q9UKL4 321 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 CYP3A7-CYP3A51PA0A087WV96 503 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 PGK2P07205 417 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 CYP3A7P24462 503 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 EDNRBP24530 442 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 PSMC4P43686 418 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 MAP2K5Q13163 448 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 KIF22Q14807 665 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 ARHGEF16Q5VV41 709 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 PCNX4Q63HM2 1172 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 PPP4R3AQ6IN85 833 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 VSIG10LQ86VR7 867 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 MORC4Q8TE76 937 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 SOCS4Q8WXH5 440 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 TRIM47Q96LD4 638 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 MBOAT7Q96N66 472 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 SLC5A4Q9NY91 659 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 ASTN1O14525 1302 aa13.94□□□□□ -0.18
SCARB1-204ENST00000535005 B4DLN1 442 aa13.93□□□□□ -0.18
SCARB1-204ENST00000535005 FKTNO75072 461 aa13.93□□□□□ -0.18
SCARB1-204ENST00000535005 NR3C2P08235 984 aa13.93□□□□□ -0.18
SCARB1-204ENST00000535005 GCFC2P16383 781 aaKnown RBP13.93□□□□□ -0.18
SCARB1-204ENST00000535005 ALDH5A1P51649 535 aaPredicted RBP13.93□□□□□ -0.18
SCARB1-204ENST00000535005 PGM5Q15124 567 aa13.93□□□□□ -0.18
SCARB1-204ENST00000535005 TTC38Q5R3I4 469 aa13.93□□□□□ -0.18
SCARB1-204ENST00000535005 NUDT12Q9BQG2 462 aa13.93□□□□□ -0.18
SCARB1-204ENST00000535005 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.93□□□□□ -0.18
SCARB1-204ENST00000535005 PLXNB2O15031 1838 aa13.93□□□□□ -0.18
SCARB1-204ENST00000535005 GNRH1P01148 92 aa13.92□□□□□ -0.18
SCARB1-204ENST00000535005 EIF2AK2P19525 551 aaKnown RBP13.92□□□□□ -0.18
SCARB1-204ENST00000535005 DNM1Q05193 864 aaKnown RBP13.92□□□□□ -0.18
SCARB1-204ENST00000535005 NOLC1Q14978 699 aaKnown RBP eCLIP13.92□□□□□ -0.18
SCARB1-204ENST00000535005 LETM2Q2VYF4 491 aa13.92□□□□□ -0.18
SCARB1-204ENST00000535005 DPP9Q86TI2 863 aa13.92□□□□□ -0.18
SCARB1-204ENST00000535005 ERO1AQ96HE7 468 aa13.92□□□□□ -0.18
SCARB1-204ENST00000535005 USP28Q96RU2 1077 aa13.92□□□□□ -0.18
SCARB1-204ENST00000535005 MPHOSPH6Q99547 160 aaKnown RBP13.92□□□□□ -0.18
SCARB1-204ENST00000535005 ARHGAP39Q9C0H5 1083 aa13.92□□□□□ -0.18
SCARB1-204ENST00000535005 POLR3EQ9NVU0 708 aa13.92□□□□□ -0.18
SCARB1-204ENST00000535005 RTEL1Q9NZ71 1219 aa13.92□□□□□ -0.18
SCARB1-204ENST00000535005 CFAP45Q9UL16 551 aa13.92□□□□□ -0.18
SCARB1-204ENST00000535005 MORC2Q9Y6X9 1032 aaPredicted RBP13.92□□□□□ -0.18
SCARB1-204ENST00000535005 LCTP09848 1927 aa13.92□□□□□ -0.18
SCARB1-204ENST00000535005 ZNFX1Q9P2E3 1918 aaKnown RBP13.92□□□□□ -0.18
SCARB1-204ENST00000535005 CEP350Q5VT06 3117 aa13.92□□□□□ -0.18
SCARB1-204ENST00000535005 WNT7AO00755 349 aa13.92□□□□□ -0.18
SCARB1-204ENST00000535005 STAM2O75886 525 aa13.92□□□□□ -0.18
SCARB1-204ENST00000535005 CCND2P30279 289 aa13.92□□□□□ -0.18
SCARB1-204ENST00000535005 MRPS9P82933 396 aaKnown RBP13.92□□□□□ -0.18
SCARB1-204ENST00000535005 ARHGEF6Q15052 776 aa13.92□□□□□ -0.18
SCARB1-204ENST00000535005 ANO1Q5XXA6 986 aa13.92□□□□□ -0.18
SCARB1-204ENST00000535005 MAMDC4Q6UXC1 1216 aa13.92□□□□□ -0.18
SCARB1-204ENST00000535005 NIPA1Q7RTP0 329 aa13.92□□□□□ -0.18
SCARB1-204ENST00000535005 MSL3Q8N5Y2 521 aaKnown RBP13.92□□□□□ -0.18
SCARB1-204ENST00000535005 IL31RAQ8NI17 732 aa13.92□□□□□ -0.18
SCARB1-204ENST00000535005 PCDHB6Q9Y5E3 794 aa13.92□□□□□ -0.18
SCARB1-204ENST00000535005 UBIAD1Q9Y5Z9 338 aa13.92□□□□□ -0.18
SCARB1-204ENST00000535005 ASB14A6NK59 587 aa13.91□□□□□ -0.18
SCARB1-204ENST00000535005 KIF20AO95235 890 aa13.91□□□□□ -0.18
SCARB1-204ENST00000535005 BMP15O95972 392 aa13.91□□□□□ -0.18
SCARB1-204ENST00000535005 XRCC5P13010 732 aaKnown RBP13.91□□□□□ -0.18
SCARB1-204ENST00000535005 ATP2B1P20020 1258 aa13.91□□□□□ -0.18
SCARB1-204ENST00000535005 RGS2P41220 211 aa13.91□□□□□ -0.18
SCARB1-204ENST00000535005 UBXN2AP68543 259 aa13.91□□□□□ -0.18
SCARB1-204ENST00000535005 KRT85P78386 507 aa13.91□□□□□ -0.18
SCARB1-204ENST00000535005 Q4G0T1 1027 aa13.91□□□□□ -0.18
SCARB1-204ENST00000535005 ZNF296Q8WUU4 475 aaPredicted RBP13.91□□□□□ -0.18
SCARB1-204ENST00000535005 MAML3Q96JK9 1138 aa13.91□□□□□ -0.18
SCARB1-204ENST00000535005 TFIP11Q9UBB9 837 aaKnown RBP13.91□□□□□ -0.18
SCARB1-204ENST00000535005 MGAMO43451 1857 aa13.91□□□□□ -0.18
SCARB1-204ENST00000535005 MYH7BA7E2Y1 1941 aa13.91□□□□□ -0.18
SCARB1-204ENST00000535005 IGLV3-22A0A075B6J6 115 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 MEIS1O00470 390 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms