RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 CDKL5O76039 1030 aa16.08■□□□□ 0.16
VPS11-205ENST00000534551 CCND2P30279 289 aa16.08■□□□□ 0.16
VPS11-205ENST00000534551 BEX3Q00994 111 aa16.08■□□□□ 0.16
VPS11-205ENST00000534551 PWP2Q15269 919 aaKnown RBP16.08■□□□□ 0.16
VPS11-205ENST00000534551 LRRC41Q15345 812 aa16.08■□□□□ 0.16
VPS11-205ENST00000534551 SAMD3Q8N6K7 520 aa16.08■□□□□ 0.16
VPS11-205ENST00000534551 IWS1Q96ST2 819 aa16.08■□□□□ 0.16
VPS11-205ENST00000534551 WDR11Q9BZH6 1224 aa16.08■□□□□ 0.16
VPS11-205ENST00000534551 MAF1Q9H063 256 aa16.08■□□□□ 0.16
VPS11-205ENST00000534551 ZMYND12Q9H0C1 365 aa16.08■□□□□ 0.16
VPS11-205ENST00000534551 RTEL1Q9NZ71 1219 aa16.08■□□□□ 0.16
VPS11-205ENST00000534551 RBM47A0AV96 593 aaKnown RBP16.07■□□□□ 0.16
VPS11-205ENST00000534551 SPDYE3A6NKU9 549 aa16.07■□□□□ 0.16
VPS11-205ENST00000534551 DUSP11O75319 330 aaKnown RBP16.07■□□□□ 0.16
VPS11-205ENST00000534551 SEMA3FQ13275 785 aa16.07■□□□□ 0.16
VPS11-205ENST00000534551 STXBP2Q15833 593 aa16.07■□□□□ 0.16
VPS11-205ENST00000534551 LY6KQ17RY6 165 aa16.07■□□□□ 0.16
VPS11-205ENST00000534551 VSIG10LQ86VR7 867 aa16.07■□□□□ 0.16
VPS11-205ENST00000534551 CCDC148Q8NFR7 591 aa16.07■□□□□ 0.16
VPS11-205ENST00000534551 MPHOSPH6Q99547 160 aaKnown RBP16.07■□□□□ 0.16
VPS11-205ENST00000534551 ALG1Q9BT22 464 aa16.07■□□□□ 0.16
VPS11-205ENST00000534551 WDR81Q562E7 1941 aa16.06■□□□□ 0.16
VPS11-205ENST00000534551 DNM1LO00429 736 aa16.06■□□□□ 0.16
VPS11-205ENST00000534551 C6orf222P0C671 652 aaPredicted RBP16.06■□□□□ 0.16
VPS11-205ENST00000534551 RGS19P49795 217 aa16.06■□□□□ 0.16
VPS11-205ENST00000534551 MRPL12P52815 198 aaKnown RBP16.06■□□□□ 0.16
VPS11-205ENST00000534551 NLRP5P59047 1200 aa16.06■□□□□ 0.16
VPS11-205ENST00000534551 CCDC62Q6P9F0 684 aa16.06■□□□□ 0.16
VPS11-205ENST00000534551 REXO1Q8N1G1 1221 aaKnown RBP16.06■□□□□ 0.16
VPS11-205ENST00000534551 SCFD2Q8WU76 684 aa16.06■□□□□ 0.16
VPS11-205ENST00000534551 CCDC12Q8WUD4 166 aaPredicted RBP16.06■□□□□ 0.16
VPS11-205ENST00000534551 FERMT2Q96AC1 680 aa16.06■□□□□ 0.16
VPS11-205ENST00000534551 TMX3Q96JJ7 454 aa16.06■□□□□ 0.16
VPS11-205ENST00000534551 UPF3AQ9H1J1 476 aaKnown RBP16.06■□□□□ 0.16
VPS11-205ENST00000534551 C6orf50Q9HD87 102 aa16.06■□□□□ 0.16
VPS11-205ENST00000534551 SH2B1Q9NRF2 756 aaPredicted RBP16.06■□□□□ 0.16
VPS11-205ENST00000534551 PDE4DIPQ5VU43 2346 aa16.06■□□□□ 0.16
VPS11-205ENST00000534551 DYNC1LI2O43237 492 aaPredicted RBP16.05■□□□□ 0.16
VPS11-205ENST00000534551 EIF3JO75822 258 aaKnown RBP16.05■□□□□ 0.16
VPS11-205ENST00000534551 TXNP10599 105 aaKnown RBP16.05■□□□□ 0.16
VPS11-205ENST00000534551 DUSP28Q4G0W2 176 aa16.05■□□□□ 0.16
VPS11-205ENST00000534551 PCNX4Q63HM2 1172 aa16.05■□□□□ 0.16
VPS11-205ENST00000534551 KLHDC9Q8NEP7 349 aa16.05■□□□□ 0.16
VPS11-205ENST00000534551 OR6J1Q8NGC5 347 aa16.05■□□□□ 0.16
VPS11-205ENST00000534551 OXER1Q8TDS5 423 aa16.05■□□□□ 0.16
VPS11-205ENST00000534551 C11orf49Q9H6J7 331 aa16.05■□□□□ 0.16
VPS11-205ENST00000534551 BCAS3Q9H6U6 928 aa16.05■□□□□ 0.16
VPS11-205ENST00000534551 PKD2L1Q9P0L9 805 aa16.05■□□□□ 0.16
VPS11-205ENST00000534551 TELO2Q9Y4R8 837 aa16.05■□□□□ 0.16
VPS11-205ENST00000534551 MRVI1Q9Y6F6 885 aa16.05■□□□□ 0.16
VPS11-205ENST00000534551 SCN10AQ9Y5Y9 1956 aa16.05■□□□□ 0.16
VPS11-205ENST00000534551 B4DLN1 442 aa16.04■□□□□ 0.16
VPS11-205ENST00000534551 KBTBD13C9JR72 458 aa16.04■□□□□ 0.16
VPS11-205ENST00000534551 COL6A1P12109 1028 aa16.04■□□□□ 0.16
VPS11-205ENST00000534551 UBA1P22314 1058 aaKnown RBP16.04■□□□□ 0.16
VPS11-205ENST00000534551 GJA9P57773 515 aa16.04■□□□□ 0.16
VPS11-205ENST00000534551 SP2Q02086 613 aa16.04■□□□□ 0.16
VPS11-205ENST00000534551 GUCY1B3Q02153 619 aa16.04■□□□□ 0.16
VPS11-205ENST00000534551 ARHGAP1Q07960 439 aa16.04■□□□□ 0.16
VPS11-205ENST00000534551 AP3B2Q13367 1082 aa16.04■□□□□ 0.16
VPS11-205ENST00000534551 TTLL4Q14679 1199 aa16.04■□□□□ 0.16
VPS11-205ENST00000534551 IQSEC1Q6DN90 963 aa16.04■□□□□ 0.16
VPS11-205ENST00000534551 ANKLE1Q8NAG6 615 aa16.04■□□□□ 0.16
VPS11-205ENST00000534551 CYP2W1Q8TAV3 490 aa16.04■□□□□ 0.16
VPS11-205ENST00000534551 PPP1R13LQ8WUF5 828 aa16.04■□□□□ 0.16
VPS11-205ENST00000534551 ZSCAN31Q96LW9 406 aaPredicted RBP16.04■□□□□ 0.16
VPS11-205ENST00000534551 INPP4AQ96PE3 977 aaPredicted RBP16.04■□□□□ 0.16
VPS11-205ENST00000534551 UIMC1Q96RL1 719 aa16.04■□□□□ 0.16
VPS11-205ENST00000534551 PHF20Q9BVI0 1012 aa16.04■□□□□ 0.16
VPS11-205ENST00000534551 SH3GLB2Q9NR46 395 aa16.04■□□□□ 0.16
VPS11-205ENST00000534551 PCDHA4Q9UN74 947 aa16.04■□□□□ 0.16
VPS11-205ENST00000534551 FAM205CA6NFA0 338 aa16.03■□□□□ 0.16
VPS11-205ENST00000534551 M0R2N6 131 aa16.03■□□□□ 0.16
VPS11-205ENST00000534551 EDIL3O43854 480 aa16.03■□□□□ 0.16
VPS11-205ENST00000534551 ITGB5P18084 799 aa16.03■□□□□ 0.16
VPS11-205ENST00000534551 SREBF1P36956 1147 aa16.03■□□□□ 0.16
VPS11-205ENST00000534551 ATN1P54259 1190 aaPredicted RBP16.03■□□□□ 0.16
VPS11-205ENST00000534551 ARHGAP4P98171 946 aa16.03■□□□□ 0.16
VPS11-205ENST00000534551 FSCN1Q16658 493 aaKnown RBP16.03■□□□□ 0.16
VPS11-205ENST00000534551 CCSAPQ6IQ19 270 aaPredicted RBP16.03■□□□□ 0.16
VPS11-205ENST00000534551 NECAB2Q7Z6G3 386 aa16.03■□□□□ 0.16
VPS11-205ENST00000534551 SENP6Q9GZR1 1112 aaPredicted RBP16.03■□□□□ 0.16
VPS11-205ENST00000534551 DDX41Q9UJV9 622 aaKnown RBP16.03■□□□□ 0.16
VPS11-205ENST00000534551 LTBP2Q14767 1821 aa16.03■□□□□ 0.16
VPS11-205ENST00000534551 A0A1W2PQ45 241 aaPredicted RBP16.02■□□□□ 0.16
VPS11-205ENST00000534551 A0A1W2PQY0 241 aa16.02■□□□□ 0.16
VPS11-205ENST00000534551 GNA11P29992 359 aa16.02■□□□□ 0.16
VPS11-205ENST00000534551 KCNA10Q16322 511 aa16.02■□□□□ 0.16
VPS11-205ENST00000534551 LRRC26Q2I0M4 334 aa16.02■□□□□ 0.16
VPS11-205ENST00000534551 EARS2Q5JPH6 523 aaKnown RBP16.02■□□□□ 0.16
VPS11-205ENST00000534551 RNF180Q86T96 592 aa16.02■□□□□ 0.16
VPS11-205ENST00000534551 BLIDQ8IZY5 108 aa16.02■□□□□ 0.16
VPS11-205ENST00000534551 DAGLBQ8NCG7 672 aa16.02■□□□□ 0.16
VPS11-205ENST00000534551 ARRDC4Q8NCT1 418 aa16.02■□□□□ 0.16
VPS11-205ENST00000534551 AFG1LQ8WV93 481 aa16.02■□□□□ 0.16
VPS11-205ENST00000534551 CRYGNQ8WXF5 182 aa16.02■□□□□ 0.16
VPS11-205ENST00000534551 AP5M1Q9H0R1 490 aa16.02■□□□□ 0.16
VPS11-205ENST00000534551 UBIAD1Q9Y5Z9 338 aa16.02■□□□□ 0.16
VPS11-205ENST00000534551 GGPS1O95749 300 aa16.01■□□□□ 0.15
VPS11-205ENST00000534551 FOSP01100 380 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms