RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	C2orf69	Q8N8R5	385 aa		6.27	□□□□□ -1.41
ECHDC1-223	ENST00000534442	FAM13C	Q8NE31	585 aa		6.27	□□□□□ -1.41
ECHDC1-223	ENST00000534442	ZNF507	Q8TCN5	953 aa		6.27	□□□□□ -1.41
ECHDC1-223	ENST00000534442	KLHL6	Q8WZ60	621 aa		6.27	□□□□□ -1.41
ECHDC1-223	ENST00000534442	ZNF775	Q96BV0	537 aa	Predicted RBP	6.27	□□□□□ -1.41
ECHDC1-223	ENST00000534442	SEMA6B	Q9H3T3	888 aa		6.27	□□□□□ -1.41
ECHDC1-223	ENST00000534442	PICK1	Q9NRD5	415 aa		6.27	□□□□□ -1.41
ECHDC1-223	ENST00000534442	ENAM	Q9NRM1	1142 aa		6.27	□□□□□ -1.41
ECHDC1-223	ENST00000534442	POGK	Q9P215	609 aa		6.27	□□□□□ -1.41
ECHDC1-223	ENST00000534442	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	6.27	□□□□□ -1.41
ECHDC1-223	ENST00000534442	SLC12A7	Q9Y666	1083 aa		6.27	□□□□□ -1.41
ECHDC1-223	ENST00000534442	RPGRIP1L	Q68CZ1	1315 aa		6.26	□□□□□ -1.41
ECHDC1-223	ENST00000534442	USP24	Q9UPU5	2620 aa		6.26	□□□□□ -1.41
ECHDC1-223	ENST00000534442	FZD9	O00144	591 aa		6.26	□□□□□ -1.41
ECHDC1-223	ENST00000534442	DIAPH1	O60610	1272 aa	Known RBP	6.26	□□□□□ -1.41
ECHDC1-223	ENST00000534442	IFRD2	Q12894	506 aa	Predicted RBP	6.26	□□□□□ -1.41
ECHDC1-223	ENST00000534442	TRIM28	Q13263	835 aa	Known RBP	6.26	□□□□□ -1.41
ECHDC1-223	ENST00000534442	SLBP	Q14493	270 aa	Known RBP eCLIP	6.26	□□□□□ -1.41
ECHDC1-223	ENST00000534442	SLC6A19	Q695T7	634 aa		6.26	□□□□□ -1.41
ECHDC1-223	ENST00000534442	VHLL	Q6RSH7	139 aa		6.26	□□□□□ -1.41
ECHDC1-223	ENST00000534442	TREML4	Q6UXN2	200 aa		6.26	□□□□□ -1.41
ECHDC1-223	ENST00000534442	SPATC1	Q76KD6	591 aa		6.26	□□□□□ -1.41
ECHDC1-223	ENST00000534442	SLFN12	Q8IYM2	578 aa		6.26	□□□□□ -1.41
ECHDC1-223	ENST00000534442	SMARCC1	Q92922	1105 aa	Predicted RBP	6.26	□□□□□ -1.41
ECHDC1-223	ENST00000534442	ZNF622	Q969S3	477 aa	Known RBP eCLIP	6.26	□□□□□ -1.41	1e-7	■□□□□ 9.8
ECHDC1-223	ENST00000534442	ISL2	Q96A47	359 aa		6.26	□□□□□ -1.41
ECHDC1-223	ENST00000534442	MRPL18	Q9H0U6	180 aa	Known RBP	6.26	□□□□□ -1.41
ECHDC1-223	ENST00000534442	ATXN3L	Q9H3M9	355 aa		6.26	□□□□□ -1.41
ECHDC1-223	ENST00000534442	PHAX	Q9H814	394 aa	Known RBP	6.26	□□□□□ -1.41
ECHDC1-223	ENST00000534442	CYP4F12	Q9HCS2	524 aa		6.26	□□□□□ -1.41
ECHDC1-223	ENST00000534442	ZNF277	Q9NRM2	450 aa	Predicted RBP	6.26	□□□□□ -1.41
ECHDC1-223	ENST00000534442	ZNF214	Q9UL59	606 aa	Predicted RBP	6.26	□□□□□ -1.41
ECHDC1-223	ENST00000534442	AP4E1	Q9UPM8	1137 aa		6.26	□□□□□ -1.41
ECHDC1-223	ENST00000534442	MAP2	P11137	1827 aa	Known RBP	6.26	□□□□□ -1.41
ECHDC1-223	ENST00000534442	COL2A1	P02458	1487 aa	Predicted RBP	6.26	□□□□□ -1.41
ECHDC1-223	ENST00000534442	GNB5	O14775	395 aa		6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	RGS13	O14921	159 aa		6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	UBOX5	O94941	541 aa		6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	HCLS1	P14317	486 aa	Predicted RBP	6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	HSP90B1	P14625	803 aa	Known RBP	6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	ELN	P15502	786 aa		6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	RAG1	P15918	1043 aa		6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	YARS	P54577	528 aa	Known RBP	6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	CHMP4BP1	P59074	171 aa		6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	SQSTM1	Q13501	440 aa		6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	NCAPH	Q15003	741 aa		6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	MTERF2	Q49AM1	385 aa		6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	SHISA2	Q6UWI4	295 aa		6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	CDC37L1	Q7L3B6	337 aa		6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	DYM	Q7RTS9	669 aa		6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	TMEM192	Q8IY95	271 aa		6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	AGGF1	Q8N302	714 aa	eCLIP	6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	C2CD4A	Q8NCU7	369 aa	Predicted RBP	6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	CD99L2	Q8TCZ2	262 aa		6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	UIMC1	Q96RL1	719 aa		6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	KIF2C	Q99661	725 aa		6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	DPH2	Q9BQC3	489 aa	Predicted RBP	6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	SRP68	Q9UHB9	627 aa	Known RBP	6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	PFDN2	Q9UHV9	154 aa		6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	ZMYM5	Q9UJ78	669 aa		6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	ACTL7B	Q9Y614	415 aa		6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	MRC1	P22897	1456 aa		6.25	□□□□□ -1.41
ECHDC1-223	ENST00000534442	MAP1B	P46821	2468 aa	Known RBP	6.24	□□□□□ -1.41
ECHDC1-223	ENST00000534442	TCF20	Q9UGU0	1960 aa	Known RBP	6.24	□□□□□ -1.41
ECHDC1-223	ENST00000534442	BPTF	Q12830	3046 aa		6.24	□□□□□ -1.41
ECHDC1-223	ENST00000534442	ESYT3	A0FGR9	886 aa		6.24	□□□□□ -1.41
ECHDC1-223	ENST00000534442	CYSRT1	A8MQ03	144 aa		6.24	□□□□□ -1.41
ECHDC1-223	ENST00000534442	PRR33	A8MZF0	331 aa		6.24	□□□□□ -1.41
ECHDC1-223	ENST00000534442		F8W735	103 aa	Predicted RBP	6.24	□□□□□ -1.41
ECHDC1-223	ENST00000534442	CAP2	P40123	477 aa		6.24	□□□□□ -1.41
ECHDC1-223	ENST00000534442	ST3GAL2	Q16842	350 aa		6.24	□□□□□ -1.41
ECHDC1-223	ENST00000534442	PLEKHG4	Q58EX7	1191 aa		6.24	□□□□□ -1.41
ECHDC1-223	ENST00000534442	KIAA1211L	Q6NV74	962 aa		6.24	□□□□□ -1.41
ECHDC1-223	ENST00000534442	PPFIBP1	Q86W92	1011 aa		6.24	□□□□□ -1.41
ECHDC1-223	ENST00000534442	TMEM130	Q8N3G9	435 aa		6.24	□□□□□ -1.41
ECHDC1-223	ENST00000534442	C12orf50	Q8NA57	414 aa	Predicted RBP	6.24	□□□□□ -1.41
ECHDC1-223	ENST00000534442	ST13P5	Q8NFI4	369 aa	Predicted RBP	6.24	□□□□□ -1.41
ECHDC1-223	ENST00000534442	KCNH6	Q9H252	994 aa		6.24	□□□□□ -1.41
ECHDC1-223	ENST00000534442	ADARB2	Q9NS39	739 aa	Known RBP	6.24	□□□□□ -1.41
ECHDC1-223	ENST00000534442	FAM105A	Q9NUU6	356 aa		6.24	□□□□□ -1.41
ECHDC1-223	ENST00000534442	FANCL	Q9NW38	375 aa		6.24	□□□□□ -1.41
ECHDC1-223	ENST00000534442	LEMD3	Q9Y2U8	911 aa		6.24	□□□□□ -1.41
ECHDC1-223	ENST00000534442	PTCH2	Q9Y6C5	1203 aa		6.24	□□□□□ -1.41
ECHDC1-223	ENST00000534442	AFDN	P55196	1824 aa	Known RBP	6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	CARMIL3	Q8ND23	1372 aa		6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	SPDYE3	A6NKU9	549 aa		6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	FARP2	O94887	1054 aa	Predicted RBP	6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	ALX3	O95076	343 aa		6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	CST3	P01034	146 aa	Predicted RBP	6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	SYN1	P17600	705 aa		6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	NCL	P19338	710 aa	Known RBP	6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	LOR	P23490	312 aa	Predicted RBP	6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	CCNF	P41002	786 aa		6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	ASPA	P45381	313 aa		6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	ID4	P47928	161 aa		6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	SLC7A5	Q01650	507 aa		6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	GRIK4	Q16099	956 aa		6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	C2orf27A	Q580R0	203 aa		6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	PRAMEF13	Q5VWM6	474 aa		6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	PHACTR4	Q8IZ21	702 aa		6.23	□□□□□ -1.41

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