RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 NLRP3Q96P20 1036 aa21.18■□□□□ 0.98
SMPD1-210ENST00000534405 CORO1CQ9ULV4 474 aaPredicted RBP21.18■□□□□ 0.98
SMPD1-210ENST00000534405 GUCA1BQ9UMX6 200 aa21.18■□□□□ 0.98
SMPD1-210ENST00000534405 PDS5AQ29RF7 1337 aaKnown RBP21.18■□□□□ 0.98
SMPD1-210ENST00000534405 TSPY2A6NKD2 308 aa21.18■□□□□ 0.98
SMPD1-210ENST00000534405 FESP07332 822 aa21.18■□□□□ 0.98
SMPD1-210ENST00000534405 APBA1Q02410 837 aa21.18■□□□□ 0.98
SMPD1-210ENST00000534405 SPRED3Q2MJR0 410 aa21.18■□□□□ 0.98
SMPD1-210ENST00000534405 CRELD2Q6UXH1 353 aaPredicted RBP21.18■□□□□ 0.98
SMPD1-210ENST00000534405 SLF1Q9BQI6 1058 aa21.18■□□□□ 0.98
SMPD1-210ENST00000534405 HAUS4Q9H6D7 363 aa21.18■□□□□ 0.98
SMPD1-210ENST00000534405 ABHD10Q9NUJ1 306 aa21.18■□□□□ 0.98
SMPD1-210ENST00000534405 ARPP21Q9UBL0 812 aaPredicted RBP21.18■□□□□ 0.98
SMPD1-210ENST00000534405 FAM205AQ6ZU69 1335 aa21.17■□□□□ 0.98
SMPD1-210ENST00000534405 CNTNAP4Q9C0A0 1308 aa21.17■□□□□ 0.98
SMPD1-210ENST00000534405 AHCYL1O43865 530 aa21.17■□□□□ 0.98
SMPD1-210ENST00000534405 DNAJC8O75937 253 aaPredicted RBP21.17■□□□□ 0.98
SMPD1-210ENST00000534405 SCTRP47872 440 aa21.17■□□□□ 0.98
SMPD1-210ENST00000534405 FAM98CQ17RN3 349 aaKnown RBP21.17■□□□□ 0.98
SMPD1-210ENST00000534405 SBK1Q52WX2 424 aa21.17■□□□□ 0.98
SMPD1-210ENST00000534405 JAKMIP2Q96AA8 810 aa21.17■□□□□ 0.98
SMPD1-210ENST00000534405 ZIM3Q96PE6 472 aa21.17■□□□□ 0.98
SMPD1-210ENST00000534405 NOD2Q9HC29 1040 aa21.17■□□□□ 0.98
SMPD1-210ENST00000534405 PDXDC2PQ6P474 469 aa21.17■□□□□ 0.98
SMPD1-210ENST00000534405 AMIGO3Q86WK7 504 aa21.17■□□□□ 0.98
SMPD1-210ENST00000534405 CUL5Q93034 780 aa21.17■□□□□ 0.98
SMPD1-210ENST00000534405 IL17RBQ9NRM6 502 aa21.17■□□□□ 0.98
SMPD1-210ENST00000534405 MCM9Q9NXL9 1143 aa21.17■□□□□ 0.98
SMPD1-210ENST00000534405 C15orf41Q9Y2V0 281 aa21.17■□□□□ 0.98
SMPD1-210ENST00000534405 REXO2Q9Y3B8 237 aaKnown RBP21.17■□□□□ 0.98
SMPD1-210ENST00000534405 IRS2Q9Y4H2 1338 aa21.16■□□□□ 0.98
SMPD1-210ENST00000534405 PDE2AO00408 941 aaPredicted RBP21.16■□□□□ 0.98
SMPD1-210ENST00000534405 OPLAHO14841 1288 aa21.16■□□□□ 0.98
SMPD1-210ENST00000534405 LIN7AO14910 233 aaPredicted RBP21.16■□□□□ 0.98
SMPD1-210ENST00000534405 NR1D1P20393 614 aa21.16■□□□□ 0.98
SMPD1-210ENST00000534405 KCTD16Q68DU8 428 aa21.16■□□□□ 0.98
SMPD1-210ENST00000534405 CTAGE1Q96RT6 745 aa21.16■□□□□ 0.98
SMPD1-210ENST00000534405 TRIM10Q9UDY6 481 aa21.16■□□□□ 0.98
SMPD1-210ENST00000534405 CTNND2Q9UQB3 1225 aa21.16■□□□□ 0.98
SMPD1-210ENST00000534405 BUB1BO60566 1050 aaPredicted RBP21.16■□□□□ 0.98
SMPD1-210ENST00000534405 CDC25AP30304 524 aa21.16■□□□□ 0.98
SMPD1-210ENST00000534405 TM4SF1P30408 202 aa21.16■□□□□ 0.98
SMPD1-210ENST00000534405 STAG2Q8N3U4 1231 aa21.16■□□□□ 0.98
SMPD1-210ENST00000534405 C1orf131Q8NDD1 294 aaKnown RBP21.16■□□□□ 0.98
SMPD1-210ENST00000534405 CAGE1Q8TC20 777 aa21.16■□□□□ 0.98
SMPD1-210ENST00000534405 P3H4Q92791 437 aa21.16■□□□□ 0.98
SMPD1-210ENST00000534405 GPKOWQ92917 476 aaPredicted RBP eCLIP21.16■□□□□ 0.98
SMPD1-210ENST00000534405 SETDB2Q96T68 719 aa21.16■□□□□ 0.98
SMPD1-210ENST00000534405 NUP58Q9BVL2 599 aa21.16■□□□□ 0.98
SMPD1-210ENST00000534405 NARFQ9UHQ1 456 aa21.16■□□□□ 0.98
SMPD1-210ENST00000534405 ZNF831Q5JPB2 1677 aa21.16■□□□□ 0.98
SMPD1-210ENST00000534405 COQ9O75208 318 aa21.15■□□□□ 0.98
SMPD1-210ENST00000534405 PSMD2Q13200 908 aa21.15■□□□□ 0.98
SMPD1-210ENST00000534405 PPP4R3AQ6IN85 833 aa21.15■□□□□ 0.98
SMPD1-210ENST00000534405 KLHL23Q8NBE8 558 aa21.15■□□□□ 0.98
SMPD1-210ENST00000534405 EHBP1Q8NDI1 1231 aa21.15■□□□□ 0.98
SMPD1-210ENST00000534405 DYNLL2Q96FJ2 89 aa21.15■□□□□ 0.98
SMPD1-210ENST00000534405 RTN3O95197 1032 aaPredicted RBP21.15■□□□□ 0.98
SMPD1-210ENST00000534405 NEFHP12036 1026 aa21.15■□□□□ 0.98
SMPD1-210ENST00000534405 ELF3P78545 371 aaPredicted RBP21.15■□□□□ 0.98
SMPD1-210ENST00000534405 C2orf54Q08AI8 447 aa21.15■□□□□ 0.98
SMPD1-210ENST00000534405 TYW1BQ6NUM6 668 aa21.15■□□□□ 0.98
SMPD1-210ENST00000534405 C4orf32Q8N8J7 132 aa21.15■□□□□ 0.98
SMPD1-210ENST00000534405 RASGRP4Q8TDF6 673 aa21.15■□□□□ 0.98
SMPD1-210ENST00000534405 STAMBPL1Q96FJ0 436 aa21.15■□□□□ 0.98
SMPD1-210ENST00000534405 ANKRD2Q9GZV1 360 aa21.15■□□□□ 0.98
SMPD1-210ENST00000534405 TMX4Q9H1E5 349 aaPredicted RBP21.15■□□□□ 0.98
SMPD1-210ENST00000534405 E7EVH7 732 aa21.14■□□□□ 0.97
SMPD1-210ENST00000534405 CLSTN1O94985 981 aa21.14■□□□□ 0.97
SMPD1-210ENST00000534405 TNFRSF8P28908 595 aa21.14■□□□□ 0.97
SMPD1-210ENST00000534405 TRAPPC10P48553 1259 aa21.14■□□□□ 0.97
SMPD1-210ENST00000534405 TFAP4Q01664 338 aa21.14■□□□□ 0.97
SMPD1-210ENST00000534405 ITIH3Q06033 890 aa21.14■□□□□ 0.97
SMPD1-210ENST00000534405 MYO1EQ12965 1108 aa21.14■□□□□ 0.97
SMPD1-210ENST00000534405 SLC35G1Q2M3R5 365 aa21.14■□□□□ 0.97
SMPD1-210ENST00000534405 THEMIS2Q5TEJ8 643 aa21.14■□□□□ 0.97
SMPD1-210ENST00000534405 TRIM58Q8NG06 486 aa21.14■□□□□ 0.97
SMPD1-210ENST00000534405 OSBPL9Q96SU4 736 aa21.14■□□□□ 0.97
SMPD1-210ENST00000534405 NYXQ9GZU5 481 aa21.14■□□□□ 0.97
SMPD1-210ENST00000534405 CD302Q8IX05 232 aa21.14■□□□□ 0.97
SMPD1-210ENST00000534405 CCDC88AQ3V6T2 1871 aa21.13■□□□□ 0.97
SMPD1-210ENST00000534405 NDUFA10O95299 355 aa21.13■□□□□ 0.97
SMPD1-210ENST00000534405 GHRP10912 638 aa21.13■□□□□ 0.97
SMPD1-210ENST00000534405 ZNF662Q6ZS27 426 aa21.13■□□□□ 0.97
SMPD1-210ENST00000534405 ZNF572Q7Z3I7 529 aaPredicted RBP21.13■□□□□ 0.97
SMPD1-210ENST00000534405 DZIP1Q86YF9 867 aaKnown RBP21.13■□□□□ 0.97
SMPD1-210ENST00000534405 DMGDHQ9UI17 866 aaKnown RBP21.13■□□□□ 0.97
SMPD1-210ENST00000534405 EPN1Q9Y6I3 576 aaPredicted RBP21.13■□□□□ 0.97
SMPD1-210ENST00000534405 MAST2Q6P0Q8 1798 aa21.13■□□□□ 0.97
SMPD1-210ENST00000534405 ANO9A1A5B4 782 aa21.13■□□□□ 0.97
SMPD1-210ENST00000534405 KRT14P02533 472 aa21.13■□□□□ 0.97
SMPD1-210ENST00000534405 CCT6AP40227 531 aaKnown RBP21.13■□□□□ 0.97
SMPD1-210ENST00000534405 GRIK5Q16478 980 aa21.13■□□□□ 0.97
SMPD1-210ENST00000534405 GLE1Q53GS7 698 aaKnown RBP21.13■□□□□ 0.97
SMPD1-210ENST00000534405 C12orf60Q5U649 245 aa21.13■□□□□ 0.97
SMPD1-210ENST00000534405 RRAGBQ5VZM2 374 aa21.13■□□□□ 0.97
SMPD1-210ENST00000534405 MFN1Q8IWA4 741 aa21.13■□□□□ 0.97
SMPD1-210ENST00000534405 BLIDQ8IZY5 108 aa21.13■□□□□ 0.97
SMPD1-210ENST00000534405 IQCKQ8N0W5 287 aa21.13■□□□□ 0.97
SMPD1-210ENST00000534405 CCHCR1Q8TD31 782 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms