RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 ARHGAP1Q07960 439 aa26.93■■□□□ 1.9
YIF1A-213ENST00000534374 COL9A3Q14050 684 aaPredicted RBP26.93■■□□□ 1.9
YIF1A-213ENST00000534374 NBPF20Q3BBV1 942 aa26.93■■□□□ 1.9
YIF1A-213ENST00000534374 C16orf59Q7L2K0 433 aa26.93■■□□□ 1.9
YIF1A-213ENST00000534374 SGMS1Q86VZ5 419 aa26.93■■□□□ 1.9
YIF1A-213ENST00000534374 AFG1LQ8WV93 481 aa26.93■■□□□ 1.9
YIF1A-213ENST00000534374 SLC12A7Q9Y666 1083 aa26.93■■□□□ 1.9
YIF1A-213ENST00000534374 TGFB3P10600 412 aa26.92■■□□□ 1.9
YIF1A-213ENST00000534374 LAMC2Q13753 1193 aa26.92■■□□□ 1.9
YIF1A-213ENST00000534374 PGM5Q15124 567 aa26.92■■□□□ 1.9
YIF1A-213ENST00000534374 TMEM240Q5SV17 173 aa26.92■■□□□ 1.9
YIF1A-213ENST00000534374 NEK1Q96PY6 1258 aa26.92■■□□□ 1.9
YIF1A-213ENST00000534374 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.92■■□□□ 1.9
YIF1A-213ENST00000534374 NOC4LQ9BVI4 516 aaKnown RBP26.92■■□□□ 1.9
YIF1A-213ENST00000534374 MRVI1Q9Y6F6 885 aa26.92■■□□□ 1.9
YIF1A-213ENST00000534374 MYCLP12524 364 aaPredicted RBP26.91■■□□□ 1.9
YIF1A-213ENST00000534374 CASTP20810 708 aaKnown RBP26.91■■□□□ 1.9
YIF1A-213ENST00000534374 SRBD1Q8N5C6 995 aaKnown RBP26.91■■□□□ 1.9
YIF1A-213ENST00000534374 IL23AQ9NPF7 189 aa26.91■■□□□ 1.9
YIF1A-213ENST00000534374 SEC63Q9UGP8 760 aaKnown RBP26.91■■□□□ 1.9
YIF1A-213ENST00000534374 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.9■■□□□ 1.9
YIF1A-213ENST00000534374 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.9■■□□□ 1.9
YIF1A-213ENST00000534374 RGS20O76081 388 aa26.9■■□□□ 1.9
YIF1A-213ENST00000534374 MMP3P08254 477 aa26.9■■□□□ 1.9
YIF1A-213ENST00000534374 EXOSC10Q01780 885 aaKnown RBP26.9■■□□□ 1.9
YIF1A-213ENST00000534374 PSRC1Q6PGN9 363 aaPredicted RBP26.9■■□□□ 1.9
YIF1A-213ENST00000534374 FCHSD1Q86WN1 690 aa26.9■■□□□ 1.9
YIF1A-213ENST00000534374 FANCBQ8NB91 859 aa26.9■■□□□ 1.9
YIF1A-213ENST00000534374 PIBF1Q8WXW3 757 aa26.9■■□□□ 1.9
YIF1A-213ENST00000534374 TRMT13Q9NUP7 481 aaKnown RBP26.9■■□□□ 1.9
YIF1A-213ENST00000534374 CCND2P30279 289 aa26.89■■□□□ 1.9
YIF1A-213ENST00000534374 KRT32Q14532 448 aa26.89■■□□□ 1.9
YIF1A-213ENST00000534374 DGKDQ16760 1214 aa26.89■■□□□ 1.9
YIF1A-213ENST00000534374 ZNF697Q5TEC3 545 aa26.89■■□□□ 1.9
YIF1A-213ENST00000534374 RASIP1Q5U651 963 aa26.89■■□□□ 1.9
YIF1A-213ENST00000534374 DHX32Q7L7V1 743 aaKnown RBP26.89■■□□□ 1.9
YIF1A-213ENST00000534374 LRRC2Q9BYS8 371 aa26.89■■□□□ 1.9
YIF1A-213ENST00000534374 PIK3CDO00329 1044 aa26.88■■□□□ 1.89
YIF1A-213ENST00000534374 STAM2O75886 525 aa26.88■■□□□ 1.89
YIF1A-213ENST00000534374 PLEKHA8P1O95397 391 aa26.88■■□□□ 1.89
YIF1A-213ENST00000534374 SYNE3Q6ZMZ3 975 aa26.88■■□□□ 1.89
YIF1A-213ENST00000534374 ZNF365Q70YC5 407 aa26.88■■□□□ 1.89
YIF1A-213ENST00000534374 DHX37Q8IY37 1157 aaKnown RBP26.88■■□□□ 1.89
YIF1A-213ENST00000534374 PPTC7Q8NI37 304 aa26.88■■□□□ 1.89
YIF1A-213ENST00000534374 MYH7BA7E2Y1 1941 aa26.87■■□□□ 1.89
YIF1A-213ENST00000534374 FAM47CQ5HY64 1035 aa26.87■■□□□ 1.89
YIF1A-213ENST00000534374 MYSM1Q5VVJ2 828 aa26.87■■□□□ 1.89
YIF1A-213ENST00000534374 SESTD1Q86VW0 696 aa26.87■■□□□ 1.89
YIF1A-213ENST00000534374 RASEFQ8IZ41 740 aa26.87■■□□□ 1.89
YIF1A-213ENST00000534374 RPUSD2Q8IZ73 545 aaKnown RBP26.87■■□□□ 1.89
YIF1A-213ENST00000534374 IL31RAQ8NI17 732 aa26.87■■□□□ 1.89
YIF1A-213ENST00000534374 SEMA6BQ9H3T3 888 aa26.87■■□□□ 1.89
YIF1A-213ENST00000534374 FRMPD4Q14CM0 1322 aa26.87■■□□□ 1.89
YIF1A-213ENST00000534374 UMODL1Q5DID0 1318 aa26.87■■□□□ 1.89
YIF1A-213ENST00000534374 PPFIA4O75335 1185 aa26.86■■□□□ 1.89
YIF1A-213ENST00000534374 HMGB1P09429 215 aaKnown RBP26.86■■□□□ 1.89
YIF1A-213ENST00000534374 ACRP10323 421 aa26.86■■□□□ 1.89
YIF1A-213ENST00000534374 RXRAP19793 462 aa26.86■■□□□ 1.89
YIF1A-213ENST00000534374 CCL23P55773 120 aa26.86■■□□□ 1.89
YIF1A-213ENST00000534374 CELF3Q5SZQ8 465 aaKnown RBP26.86■■□□□ 1.89
YIF1A-213ENST00000534374 HERVK_113Q902F9 699 aa26.86■■□□□ 1.89
YIF1A-213ENST00000534374 KAT2BQ92831 832 aa26.86■■□□□ 1.89
YIF1A-213ENST00000534374 CUL5Q93034 780 aa26.86■■□□□ 1.89
YIF1A-213ENST00000534374 WNT8AQ9H1J5 351 aa26.86■■□□□ 1.89
YIF1A-213ENST00000534374 A0A0C4DFX4 3053 aa26.85■■□□□ 1.89
YIF1A-213ENST00000534374 TMEM265A0A087WTH1 108 aa26.85■■□□□ 1.89
YIF1A-213ENST00000534374 DLL1O00548 723 aa26.85■■□□□ 1.89
YIF1A-213ENST00000534374 FGBP02675 491 aa26.85■■□□□ 1.89
YIF1A-213ENST00000534374 CYP2C9P11712 490 aa26.85■■□□□ 1.89
YIF1A-213ENST00000534374 HOXD8P13378 290 aaPredicted RBP26.85■■□□□ 1.89
YIF1A-213ENST00000534374 TMTC3Q6ZXV5 915 aa26.85■■□□□ 1.89
YIF1A-213ENST00000534374 CMTR1Q8N1G2 835 aaKnown RBP26.85■■□□□ 1.89
YIF1A-213ENST00000534374 SMARCC2Q8TAQ2 1214 aa26.85■■□□□ 1.89
YIF1A-213ENST00000534374 KCNB2Q92953 911 aa26.85■■□□□ 1.89
YIF1A-213ENST00000534374 MEIS2O14770 477 aa26.84■■□□□ 1.89
YIF1A-213ENST00000534374 ICAM3P32942 547 aa26.84■■□□□ 1.89
YIF1A-213ENST00000534374 ADCK5Q3MIX3 580 aa26.84■■□□□ 1.89
YIF1A-213ENST00000534374 GNPTABQ3T906 1256 aa26.84■■□□□ 1.89
YIF1A-213ENST00000534374 XRRA1Q6P2D8 792 aa26.84■■□□□ 1.89
YIF1A-213ENST00000534374 GUCD1Q96NT3 240 aa26.84■■□□□ 1.89
YIF1A-213ENST00000534374 MTIF3Q9H2K0 278 aaKnown RBP26.84■■□□□ 1.89
YIF1A-213ENST00000534374 CUL9Q8IWT3 2517 aa26.83■■□□□ 1.89
YIF1A-213ENST00000534374 PITPNM1O00562 1244 aa26.83■■□□□ 1.89
YIF1A-213ENST00000534374 MRPS9P82933 396 aaKnown RBP26.83■■□□□ 1.89
YIF1A-213ENST00000534374 SP2Q02086 613 aa26.83■■□□□ 1.89
YIF1A-213ENST00000534374 APOA5Q6Q788 366 aa26.83■■□□□ 1.89
YIF1A-213ENST00000534374 USP17L6PQ6QN14 398 aa26.83■■□□□ 1.89
YIF1A-213ENST00000534374 MICU3Q86XE3 530 aa26.83■■□□□ 1.89
YIF1A-213ENST00000534374 INPP4AQ96PE3 977 aaPredicted RBP26.83■■□□□ 1.89
YIF1A-213ENST00000534374 KATNAL1Q9BW62 490 aa26.83■■□□□ 1.89
YIF1A-213ENST00000534374 PSTPIP2Q9H939 334 aa26.83■■□□□ 1.89
YIF1A-213ENST00000534374 RBM28Q9NW13 759 aaKnown RBP26.83■■□□□ 1.89
YIF1A-213ENST00000534374 GGPS1O95749 300 aa26.82■■□□□ 1.88
YIF1A-213ENST00000534374 PFKMP08237 780 aa26.82■■□□□ 1.88
YIF1A-213ENST00000534374 FAM161BQ96MY7 647 aa26.82■■□□□ 1.88
YIF1A-213ENST00000534374 SPATA33Q96N06 139 aa26.82■■□□□ 1.88
YIF1A-213ENST00000534374 SPATA31C2B4DYI2 1134 aa26.81■■□□□ 1.88
YIF1A-213ENST00000534374 BFSP2Q13515 415 aa26.81■■□□□ 1.88
YIF1A-213ENST00000534374 PTGISQ16647 500 aa26.81■■□□□ 1.88
YIF1A-213ENST00000534374 PCNX4Q63HM2 1172 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms