RNA–Protein interactions for RNA: ENST00000534348.5

NEDD8-MDP1-202, Transcript of NEDD8-MDP1 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NEDD8-MDP1, Length 595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-202ENST00000534348 STAT2P52630 851 aa12.16□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 ZNF200P98182 395 aaPredicted RBP12.16□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 ADAM15Q13444 863 aa12.16□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 POLA2Q14181 598 aa12.16□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 TKFCQ3LXA3 575 aa12.16□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 C7orf31Q8N865 590 aa12.16□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 MORC4Q8TE76 937 aa12.16□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 AFG1LQ8WV93 481 aa12.16□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 MSLNLQ96KJ4 702 aa12.16□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 RIPOR3Q96MK2 946 aa12.16□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 ALG1Q9BT22 464 aa12.16□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 HDAC6Q9UBN7 1215 aa12.16□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 ADD3Q9UEY8 706 aaKnown RBP12.16□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 CHD6Q8TD26 2715 aa12.16□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 CHD8Q9HCK8 2581 aa12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 EP300Q09472 2414 aaPredicted RBP12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 RBM47A0AV96 593 aaKnown RBP12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 PTPDC1A2A3K4 754 aa12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 MINDY4BA8MYZ0 360 aa12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 PRDM1O75626 825 aa12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 CALML3P27482 149 aa12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 PDE4DQ08499 809 aa12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 SLFN5Q08AF3 891 aa12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 CBX2Q14781 532 aaPredicted RBP12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 TRAF7Q6Q0C0 670 aa12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 RBM23Q86U06 439 aaKnown RBP12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 KIAA2013Q8IYS2 634 aa12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 FIBCD1Q8N539 461 aa12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 TMEM105Q8N8V8 129 aa12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 KCNG4Q8TDN1 519 aa12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 TOP1MTQ969P6 601 aa12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 CLUAP1Q96AJ1 413 aa12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 CEP95Q96GE4 821 aa12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 IFIH1Q9BYX4 1025 aaKnown RBP12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 CLEC1BQ9P126 229 aa12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 CCPG1Q9ULG6 757 aa12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 BARX2Q9UMQ3 279 aaPredicted RBP12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 USP15Q9Y4E8 981 aaPredicted RBP12.15□□□□□ -0.46
NEDD8-MDP1-202ENST00000534348 NKRFO15226 690 aaKnown RBP eCLIP12.14□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 ARIH2O95376 493 aa12.14□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 EYA4O95677 639 aa12.14□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 FDX1P10109 184 aa12.14□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 MCCP23508 829 aa12.14□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 THPOP40225 353 aa12.14□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 PTPN21Q16825 1174 aa12.14□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 KCTD1Q719H9 257 aa12.14□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 SSH3Q8TE77 659 aa12.14□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 SCFD2Q8WU76 684 aa12.14□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 CHURC1Q8WUH1 139 aa12.14□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 KAT2BQ92831 832 aa12.14□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 C11orf84Q9BUA3 381 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 PHF7Q9BWX1 381 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 GTF2IRD1Q9UHL9 959 aa12.14□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 MTMR7Q9Y216 660 aa12.14□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 ACACBO00763 2458 aa12.14□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 RSPH10B2B2RC85 870 aa12.13□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 NFIBO00712 420 aa12.13□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 MMP3P08254 477 aa12.13□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 RSPH10BP0C881 870 aa12.13□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 ICAM3P32942 547 aa12.13□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 BMPR1AP36894 532 aa12.13□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 SLC1A4P43007 532 aa12.13□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 ATP8B2P98198 1209 aa12.13□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 RBL2Q08999 1139 aa12.13□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 PTK7Q13308 1070 aa12.13□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 TRIM71Q2Q1W2 868 aaKnown RBP12.13□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 ADGRD2Q7Z7M1 963 aa12.13□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 SESTD1Q86VW0 696 aa12.13□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 RPAP2Q8IXW5 612 aaPredicted RBP12.13□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 ZNF444Q8N0Y2 327 aaPredicted RBP12.13□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 SMRP1Q8NCR6 262 aa12.13□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 GMCL1P1Q8NEA9 526 aa12.13□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 STAG1Q8WVM7 1258 aa12.13□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 MKL1Q969V6 931 aa12.13□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 IL17RAQ96F46 866 aa12.13□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 LMAN2LQ9H0V9 348 aa12.13□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 IL1RAPL2Q9NP60 686 aa12.13□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 MICAL3Q7RTP6 2002 aa12.12□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 IGKV6D-41A0A0C4DH26 115 aa12.12□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 TTLL1O95922 423 aa12.12□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 ADD2P35612 726 aa12.12□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 NRIP1P48552 1158 aa12.12□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 NUBP1P53384 320 aa12.12□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 LY6KQ17RY6 165 aa12.12□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 MCTP2Q6DN12 878 aa12.12□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 SLC30A10Q6XR72 485 aa12.12□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 RASGRP2Q7LDG7 609 aa12.12□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 FAM160B2Q86V87 743 aa12.12□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 DHX37Q8IY37 1157 aaKnown RBP12.12□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 OSBPL7Q9BZF2 842 aa12.12□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 MTMR4Q9NYA4 1195 aa12.12□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 RALYQ9UKM9 306 aaKnown RBP12.12□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 PRR12Q9ULL5 1215 aa12.12□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 EMSYQ7Z589 1322 aa12.11□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.11□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 RB1P06400 928 aa12.11□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 ZNF286BP0CG31 522 aa12.11□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 CASTP20810 708 aaKnown RBP12.11□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 PSEN2P49810 448 aa12.11□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 RBM10P98175 930 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms