RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 SNX14Q9Y5W7 946 aa17.8■□□□□ 0.44
UBXN1-217ENST00000534176 TRIOBPQ9H2D6 2365 aa17.8■□□□□ 0.44
UBXN1-217ENST00000534176 KIAA1217Q5T5P2 1943 aa17.79■□□□□ 0.44
UBXN1-217ENST00000534176 KLF18A0A0U1RQI7 1052 aa17.79■□□□□ 0.44
UBXN1-217ENST00000534176 GOLGA8AA7E2F4 631 aa17.79■□□□□ 0.44
UBXN1-217ENST00000534176 GOLGA8BA8MQT2 603 aa17.79■□□□□ 0.44
UBXN1-217ENST00000534176 PLEKHA8P1O95397 391 aa17.79■□□□□ 0.44
UBXN1-217ENST00000534176 TIMP1P01033 207 aa17.79■□□□□ 0.44
UBXN1-217ENST00000534176 RPS6KB1P23443 525 aa17.79■□□□□ 0.44
UBXN1-217ENST00000534176 HOXA13P31271 388 aaPredicted RBP17.79■□□□□ 0.44
UBXN1-217ENST00000534176 DGKDQ16760 1214 aa17.79■□□□□ 0.44
UBXN1-217ENST00000534176 MCTP2Q6DN12 878 aa17.79■□□□□ 0.44
UBXN1-217ENST00000534176 NFRKBQ6P4R8 1299 aa17.79■□□□□ 0.44
UBXN1-217ENST00000534176 KATNAL1Q9BW62 490 aa17.79■□□□□ 0.44
UBXN1-217ENST00000534176 AGXT2Q9BYV1 514 aa17.79■□□□□ 0.44
UBXN1-217ENST00000534176 TM6SF1Q9BZW5 370 aa17.79■□□□□ 0.44
UBXN1-217ENST00000534176 DDX41Q9UJV9 622 aaKnown RBP17.79■□□□□ 0.44
UBXN1-217ENST00000534176 TBX21Q9UL17 535 aa17.79■□□□□ 0.44
UBXN1-217ENST00000534176 NID2Q14112 1375 aa17.79■□□□□ 0.44
UBXN1-217ENST00000534176 TRIM43BA6NCK2 446 aa17.78■□□□□ 0.44
UBXN1-217ENST00000534176 SPDYE3A6NKU9 549 aa17.78■□□□□ 0.44
UBXN1-217ENST00000534176 MYCLP12524 364 aaPredicted RBP17.78■□□□□ 0.44
UBXN1-217ENST00000534176 METAP2P50579 478 aaKnown RBP eCLIP17.78■□□□□ 0.44
UBXN1-217ENST00000534176 FPGSQ05932 587 aa17.78■□□□□ 0.44
UBXN1-217ENST00000534176 FCHSD1Q86WN1 690 aa17.78■□□□□ 0.44
UBXN1-217ENST00000534176 TMEM199Q8N511 208 aa17.78■□□□□ 0.44
UBXN1-217ENST00000534176 GIMAP8Q8ND71 665 aaPredicted RBP17.78■□□□□ 0.44
UBXN1-217ENST00000534176 PPTC7Q8NI37 304 aa17.78■□□□□ 0.44
UBXN1-217ENST00000534176 CCDC12Q8WUD4 166 aaPredicted RBP17.78■□□□□ 0.44
UBXN1-217ENST00000534176 TRIM43Q96BQ3 446 aaPredicted RBP17.78■□□□□ 0.44
UBXN1-217ENST00000534176 BAZ2BQ9UIF8 2168 aaKnown RBP17.78■□□□□ 0.44
UBXN1-217ENST00000534176 DNAH12Q6ZR08 3092 aa17.78■□□□□ 0.44
UBXN1-217ENST00000534176 LTBP2Q14767 1821 aa17.77■□□□□ 0.44
UBXN1-217ENST00000534176 RANBP2P49792 3224 aaKnown RBP17.77■□□□□ 0.44
UBXN1-217ENST00000534176 MAFGO15525 162 aa17.77■□□□□ 0.44
UBXN1-217ENST00000534176 PPFIA4O75335 1185 aa17.77■□□□□ 0.44
UBXN1-217ENST00000534176 FOSP01100 380 aaPredicted RBP17.77■□□□□ 0.44
UBXN1-217ENST00000534176 CD4P01730 458 aa17.77■□□□□ 0.44
UBXN1-217ENST00000534176 MYL3P08590 195 aa17.77■□□□□ 0.44
UBXN1-217ENST00000534176 RXRAP19793 462 aa17.77■□□□□ 0.44
UBXN1-217ENST00000534176 ICAM3P32942 547 aa17.77■□□□□ 0.44
UBXN1-217ENST00000534176 PPIGQ13427 754 aaKnown RBP eCLIP17.77■□□□□ 0.44
UBXN1-217ENST00000534176 NEDD9Q14511 834 aa17.77■□□□□ 0.44
UBXN1-217ENST00000534176 PCNX4Q63HM2 1172 aa17.77■□□□□ 0.44
UBXN1-217ENST00000534176 MFSD5Q6N075 450 aa17.77■□□□□ 0.44
UBXN1-217ENST00000534176 Q6ZUG5 572 aa17.77■□□□□ 0.44
UBXN1-217ENST00000534176 RUFY3Q7L099 469 aa17.77■□□□□ 0.44
UBXN1-217ENST00000534176 NLRX1Q86UT6 975 aa17.77■□□□□ 0.44
UBXN1-217ENST00000534176 DHX37Q8IY37 1157 aaKnown RBP17.77■□□□□ 0.44
UBXN1-217ENST00000534176 PIBF1Q8WXW3 757 aa17.77■□□□□ 0.44
UBXN1-217ENST00000534176 BADQ92934 168 aa17.77■□□□□ 0.44
UBXN1-217ENST00000534176 USP26Q9BXU7 913 aa17.77■□□□□ 0.44
UBXN1-217ENST00000534176 CYP46A1Q9Y6A2 500 aa17.77■□□□□ 0.44
UBXN1-217ENST00000534176 DDX49Q9Y6V7 483 aaKnown RBP17.77■□□□□ 0.44
UBXN1-217ENST00000534176 MEIS2O14770 477 aa17.76■□□□□ 0.43
UBXN1-217ENST00000534176 FIBPO43427 364 aa17.76■□□□□ 0.43
UBXN1-217ENST00000534176 MMP3P08254 477 aa17.76■□□□□ 0.43
UBXN1-217ENST00000534176 EVCP57679 992 aa17.76■□□□□ 0.43
UBXN1-217ENST00000534176 ANAPC15P60006 121 aa17.76■□□□□ 0.43
UBXN1-217ENST00000534176 ARHGAP1Q07960 439 aa17.76■□□□□ 0.43
UBXN1-217ENST00000534176 LY6KQ17RY6 165 aa17.76■□□□□ 0.43
UBXN1-217ENST00000534176 HEATR3Q7Z4Q2 680 aa17.76■□□□□ 0.43
UBXN1-217ENST00000534176 INPP4AQ96PE3 977 aaPredicted RBP17.76■□□□□ 0.43
UBXN1-217ENST00000534176 SENP7Q9BQF6 1050 aa17.76■□□□□ 0.43
UBXN1-217ENST00000534176 BRPF3Q9ULD4 1205 aa17.76■□□□□ 0.43
UBXN1-217ENST00000534176 CNTNAP5Q8WYK1 1306 aa17.75■□□□□ 0.43
UBXN1-217ENST00000534176 ARIH2O95376 493 aa17.75■□□□□ 0.43
UBXN1-217ENST00000534176 IRX5P78411 483 aaPredicted RBP17.75■□□□□ 0.43
UBXN1-217ENST00000534176 AKAP17AQ02040 695 aaKnown RBP17.75■□□□□ 0.43
UBXN1-217ENST00000534176 SH3RF1Q7Z6J0 888 aa17.75■□□□□ 0.43
UBXN1-217ENST00000534176 SESTD1Q86VW0 696 aa17.75■□□□□ 0.43
UBXN1-217ENST00000534176 CCDC82Q8N4S0 544 aa17.75■□□□□ 0.43
UBXN1-217ENST00000534176 BRF1Q92994 677 aa17.75■□□□□ 0.43
UBXN1-217ENST00000534176 ALDH8A1Q9H2A2 487 aaPredicted RBP17.75■□□□□ 0.43
UBXN1-217ENST00000534176 ZSWIM6Q9HCJ5 1215 aa17.75■□□□□ 0.43
UBXN1-217ENST00000534176 PCDH10Q9P2E7 1040 aa17.75■□□□□ 0.43
UBXN1-217ENST00000534176 NAP1L2Q9ULW6 460 aaPredicted RBP17.75■□□□□ 0.43
UBXN1-217ENST00000534176 HOXD8P13378 290 aaPredicted RBP17.74■□□□□ 0.43
UBXN1-217ENST00000534176 NAPAP54920 295 aa17.74■□□□□ 0.43
UBXN1-217ENST00000534176 AP3B2Q13367 1082 aa17.74■□□□□ 0.43
UBXN1-217ENST00000534176 CELF3Q5SZQ8 465 aaKnown RBP17.74■□□□□ 0.43
UBXN1-217ENST00000534176 MYSM1Q5VVJ2 828 aa17.74■□□□□ 0.43
UBXN1-217ENST00000534176 FAM177A1Q8N128 213 aaPredicted RBP17.74■□□□□ 0.43
UBXN1-217ENST00000534176 CCDC155Q8N6L0 562 aa17.74■□□□□ 0.43
UBXN1-217ENST00000534176 AFG1LQ8WV93 481 aa17.74■□□□□ 0.43
UBXN1-217ENST00000534176 GPRASP2Q96D09 838 aa17.74■□□□□ 0.43
UBXN1-217ENST00000534176 TCEANC2Q96MN5 208 aa17.74■□□□□ 0.43
UBXN1-217ENST00000534176 MTIF3Q9H2K0 278 aaKnown RBP17.74■□□□□ 0.43
UBXN1-217ENST00000534176 HIPK3Q9H422 1215 aa17.74■□□□□ 0.43
UBXN1-217ENST00000534176 MLXIPQ9HAP2 919 aa17.74■□□□□ 0.43
UBXN1-217ENST00000534176 RIC8AQ9NPQ8 531 aa17.74■□□□□ 0.43
UBXN1-217ENST00000534176 BARHL2Q9NY43 387 aa17.74■□□□□ 0.43
UBXN1-217ENST00000534176 PFKMP08237 780 aa17.73■□□□□ 0.43
UBXN1-217ENST00000534176 FUT2Q10981 343 aa17.73■□□□□ 0.43
UBXN1-217ENST00000534176 COL9A3Q14050 684 aaPredicted RBP17.73■□□□□ 0.43
UBXN1-217ENST00000534176 TMEM63BQ5T3F8 832 aa17.73■□□□□ 0.43
UBXN1-217ENST00000534176 PSRC1Q6PGN9 363 aaPredicted RBP17.73■□□□□ 0.43
UBXN1-217ENST00000534176 CPLX2Q6PUV4 134 aaKnown RBP17.73■□□□□ 0.43
UBXN1-217ENST00000534176 USP17L6PQ6QN14 398 aa17.73■□□□□ 0.43
UBXN1-217ENST00000534176 CMTR1Q8N1G2 835 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms