RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 TM6SF1Q9BZW5 370 aa6.93□□□□□ -1.3
CLNS1A-212ENST00000533957 DBF4Q9UBU7 674 aaPredicted RBP6.93□□□□□ -1.3
CLNS1A-212ENST00000533957 SALL3Q9BXA9 1300 aa6.93□□□□□ -1.3
CLNS1A-212ENST00000533957 USP42Q9H9J4 1324 aaKnown RBP6.93□□□□□ -1.3
CLNS1A-212ENST00000533957 CEMIPQ8WUJ3 1361 aa6.93□□□□□ -1.3
CLNS1A-212ENST00000533957 RGPD2P0DJD1 1756 aa6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 CAVIN2O95810 425 aa6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 TSPAN15O95858 294 aa6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 TPM2P07951 284 aa6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 PDCP20941 246 aa6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 MSNP26038 577 aaKnown RBP6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 PSMA5P28066 241 aa6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 HOXC9P31274 260 aa6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 KIR3DL1P43629 444 aa6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 TNK2Q07912 1038 aa6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 SEPT6Q14141 434 aa6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 ANKRD1Q15327 319 aa6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 AGMOQ6ZNB7 445 aa6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 ZSCAN30Q86W11 494 aa6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 AEBP1Q8IUX7 1158 aa6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 RGS22Q8NE09 1264 aa6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 MAP7D2Q96T17 732 aa6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 PPP1R16BQ96T49 567 aa6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 THUMPD2Q9BTF0 503 aaKnown RBP6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 ALDH8A1Q9H2A2 487 aaPredicted RBP6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 HYPKQ9NX55 129 aa6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 TJP2Q9UDY2 1190 aa6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 AK5Q9Y6K8 562 aa6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 THSD7AQ9UPZ6 1657 aa6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 CAMTA1Q9Y6Y1 1673 aa6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 PARP4Q9UKK3 1724 aaKnown RBP6.92□□□□□ -1.3
CLNS1A-212ENST00000533957 PEAK1Q9H792 1746 aa6.91□□□□□ -1.3
CLNS1A-212ENST00000533957 N4BP2Q86UW6 1770 aaPredicted RBP6.91□□□□□ -1.3
CLNS1A-212ENST00000533957 FAM83GA6ND36 823 aa6.91□□□□□ -1.3
CLNS1A-212ENST00000533957 LMNB1P20700 586 aa6.91□□□□□ -1.3
CLNS1A-212ENST00000533957 CHMLP26374 656 aa6.91□□□□□ -1.3
CLNS1A-212ENST00000533957 HSPA4P34932 840 aa6.91□□□□□ -1.3
CLNS1A-212ENST00000533957 NEK4P51957 841 aa6.91□□□□□ -1.3
CLNS1A-212ENST00000533957 LRSAM1Q6UWE0 723 aa6.91□□□□□ -1.3
CLNS1A-212ENST00000533957 MCM10Q7L590 875 aa6.91□□□□□ -1.3
CLNS1A-212ENST00000533957 KRT28Q7Z3Y7 464 aa6.91□□□□□ -1.3
CLNS1A-212ENST00000533957 MRPL41Q8IXM3 137 aaKnown RBP6.91□□□□□ -1.3
CLNS1A-212ENST00000533957 CLASRPQ8N2M8 674 aaKnown RBP6.91□□□□□ -1.3
CLNS1A-212ENST00000533957 TMEM87AQ8NBN3 555 aa6.91□□□□□ -1.3
CLNS1A-212ENST00000533957 TOX2Q96NM4 488 aa6.91□□□□□ -1.3
CLNS1A-212ENST00000533957 MEIS3Q99687 375 aa6.91□□□□□ -1.3
CLNS1A-212ENST00000533957 KRTAP4-9Q9BYQ8 210 aa6.91□□□□□ -1.3
CLNS1A-212ENST00000533957 LMBRD1Q9NUN5 540 aa6.91□□□□□ -1.3
CLNS1A-212ENST00000533957 RAD50Q92878 1312 aa6.91□□□□□ -1.3
CLNS1A-212ENST00000533957 RRP9O43818 475 aaKnown RBP6.9□□□□□ -1.3
CLNS1A-212ENST00000533957 ESR1P03372 595 aa6.9□□□□□ -1.3
CLNS1A-212ENST00000533957 KRT1P04264 644 aa6.9□□□□□ -1.3
CLNS1A-212ENST00000533957 ZKSCAN1P17029 563 aaPredicted RBP6.9□□□□□ -1.3
CLNS1A-212ENST00000533957 DCTN1Q14203 1278 aa6.9□□□□□ -1.3
CLNS1A-212ENST00000533957 SLC6A19Q695T7 634 aa6.9□□□□□ -1.3
CLNS1A-212ENST00000533957 SLC4A10Q6U841 1118 aa6.9□□□□□ -1.3
CLNS1A-212ENST00000533957 TTC6Q86TZ1 520 aa6.9□□□□□ -1.3
CLNS1A-212ENST00000533957 PIWIL2Q8TC59 973 aaKnown RBP6.9□□□□□ -1.3
CLNS1A-212ENST00000533957 TMEM87BQ96K49 555 aa6.9□□□□□ -1.3
CLNS1A-212ENST00000533957 USP44Q9H0E7 712 aa6.9□□□□□ -1.3
CLNS1A-212ENST00000533957 SLAMF8Q9P0V8 285 aa6.9□□□□□ -1.3
CLNS1A-212ENST00000533957 NOL7Q9UMY1 257 aaKnown RBP6.9□□□□□ -1.3
CLNS1A-212ENST00000533957 LRRC37A3O60309 1634 aa6.9□□□□□ -1.31
CLNS1A-212ENST00000533957 SHANK3Q9BYB0 1731 aa6.9□□□□□ -1.31
CLNS1A-212ENST00000533957 DNAJC25-GNG10A0A024R161 153 aa6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 ZNF500O60304 480 aaPredicted RBP6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 PRPF40AO75400 957 aaKnown RBP6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 PGRP06401 933 aa6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 C1QTNF9P0C862 333 aa6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 TEFQ10587 303 aa6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 KRT32Q14532 448 aa6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 DHX8Q14562 1220 aaKnown RBP6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 MAP3K11Q16584 847 aa6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 VPS53Q5VIR6 699 aa6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 TMPRSS7Q7RTY8 843 aa6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 ABHD4Q8TB40 342 aa6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 DNAAF4Q8WXU2 420 aa6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 EVI5LQ96CN4 794 aa6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 TMX3Q96JJ7 454 aa6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 PDLIM2Q96JY6 352 aa6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 DIRC2Q96SL1 478 aa6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 DPH2Q9BQC3 489 aaPredicted RBP6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 RNF19AQ9NV58 838 aa6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 HMG20BQ9P0W2 317 aa6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 LIMCH1Q9UPQ0 1083 aa6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 UTYO14607 1347 aa6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 ATRNO75882 1429 aa6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 BCL9LQ86UU0 1499 aa6.89□□□□□ -1.31
CLNS1A-212ENST00000533957 SBF2Q86WG5 1849 aa6.88□□□□□ -1.31
CLNS1A-212ENST00000533957 TNS1Q9HBL0 1735 aaKnown RBP6.88□□□□□ -1.31
CLNS1A-212ENST00000533957 COL15A1P39059 1388 aa6.88□□□□□ -1.31
CLNS1A-212ENST00000533957 CCDC171Q6TFL3 1326 aa6.88□□□□□ -1.31
CLNS1A-212ENST00000533957 SGSM2O43147 1006 aa6.88□□□□□ -1.31
CLNS1A-212ENST00000533957 FBLN1P23142 703 aa6.88□□□□□ -1.31
CLNS1A-212ENST00000533957 ETV3P41162 512 aa6.88□□□□□ -1.31
CLNS1A-212ENST00000533957 LIG3P49916 1009 aa6.88□□□□□ -1.31
CLNS1A-212ENST00000533957 EIF4A1P60842 406 aaKnown RBP6.88□□□□□ -1.31
CLNS1A-212ENST00000533957 LRRFIP1Q32MZ4 808 aaKnown RBP6.88□□□□□ -1.31
CLNS1A-212ENST00000533957 ZSCAN23Q3MJ62 389 aa6.88□□□□□ -1.31
CLNS1A-212ENST00000533957 RALGPS1Q5JS13 557 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms