RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 SEZ6LQ9BYH1 1024 aa18.2■□□□□ 0.5
TSKU-204ENST00000533752 EHMT1Q9H9B1 1298 aa18.2■□□□□ 0.5
TSKU-204ENST00000533752 POLR3EQ9NVU0 708 aa18.2■□□□□ 0.5
TSKU-204ENST00000533752 BARHL2Q9NY43 387 aa18.2■□□□□ 0.5
TSKU-204ENST00000533752 PRKAG2Q9UGJ0 569 aa18.2■□□□□ 0.5
TSKU-204ENST00000533752 ATP11BQ9Y2G3 1177 aa18.2■□□□□ 0.5
TSKU-204ENST00000533752 MRVI1Q9Y6F6 885 aa18.2■□□□□ 0.5
TSKU-204ENST00000533752 A0A0U1RQG5 324 aaPredicted RBP18.19■□□□□ 0.5
TSKU-204ENST00000533752 SPDYE3A6NKU9 549 aa18.19■□□□□ 0.5
TSKU-204ENST00000533752 GH1P01241 217 aa18.19■□□□□ 0.5
TSKU-204ENST00000533752 BEX3Q00994 111 aa18.19■□□□□ 0.5
TSKU-204ENST00000533752 PFKFB3Q16875 520 aaPredicted RBP18.19■□□□□ 0.5
TSKU-204ENST00000533752 TRIM60Q495X7 471 aa18.19■□□□□ 0.5
TSKU-204ENST00000533752 ALDH8A1Q9H2A2 487 aaPredicted RBP18.19■□□□□ 0.5
TSKU-204ENST00000533752 RIC8AQ9NPQ8 531 aa18.19■□□□□ 0.5
TSKU-204ENST00000533752 STXBP3O00186 592 aa18.18■□□□□ 0.5
TSKU-204ENST00000533752 CPLX1O14810 134 aa18.18■□□□□ 0.5
TSKU-204ENST00000533752 PRPF3O43395 683 aaKnown RBP18.18■□□□□ 0.5
TSKU-204ENST00000533752 KPNA6O60684 536 aa18.18■□□□□ 0.5
TSKU-204ENST00000533752 ARIH2O95376 493 aa18.18■□□□□ 0.5
TSKU-204ENST00000533752 TGFB3P10600 412 aa18.18■□□□□ 0.5
TSKU-204ENST00000533752 SCG2P13521 617 aa18.18■□□□□ 0.5
TSKU-204ENST00000533752 IFNAR1P17181 557 aa18.18■□□□□ 0.5
TSKU-204ENST00000533752 ADCY7P51828 1080 aa18.18■□□□□ 0.5
TSKU-204ENST00000533752 C8orf34Q49A92 452 aa18.18■□□□□ 0.5
TSKU-204ENST00000533752 PCNX4Q63HM2 1172 aa18.18■□□□□ 0.5
TSKU-204ENST00000533752 TRIM22Q8IYM9 498 aa18.18■□□□□ 0.5
TSKU-204ENST00000533752 IL31RAQ8NI17 732 aa18.18■□□□□ 0.5
TSKU-204ENST00000533752 VTI1AQ96AJ9 217 aa18.18■□□□□ 0.5
TSKU-204ENST00000533752 CCT2P78371 535 aaKnown RBP18.17■□□□□ 0.5
TSKU-204ENST00000533752 IRX5P78411 483 aaPredicted RBP18.17■□□□□ 0.5
TSKU-204ENST00000533752 NTRK3Q16288 839 aa18.17■□□□□ 0.5
TSKU-204ENST00000533752 TMEM63BQ5T3F8 832 aa18.17■□□□□ 0.5
TSKU-204ENST00000533752 CXCL17Q6UXB2 119 aa18.17■□□□□ 0.5
TSKU-204ENST00000533752 ANKRD33Q7Z3H0 272 aa18.17■□□□□ 0.5
TSKU-204ENST00000533752 EMID1Q96A84 441 aaPredicted RBP18.17■□□□□ 0.5
TSKU-204ENST00000533752 TOX2Q96NM4 488 aa18.17■□□□□ 0.5
TSKU-204ENST00000533752 DDX41Q9UJV9 622 aaKnown RBP18.17■□□□□ 0.5
TSKU-204ENST00000533752 ZMYND8Q9ULU4 1186 aaPredicted RBP18.17■□□□□ 0.5
TSKU-204ENST00000533752 KIAA1217Q5T5P2 1943 aa18.17■□□□□ 0.5
TSKU-204ENST00000533752 ESYT2A0FGR8 921 aa18.16■□□□□ 0.5
TSKU-204ENST00000533752 A6NJR5 290 aa18.16■□□□□ 0.5
TSKU-204ENST00000533752 DCDC2CA8MYV0 355 aa18.16■□□□□ 0.5
TSKU-204ENST00000533752 CDKL5O76039 1030 aa18.16■□□□□ 0.5
TSKU-204ENST00000533752 SEC24BO95487 1268 aa18.16■□□□□ 0.5
TSKU-204ENST00000533752 FOSP01100 380 aaPredicted RBP18.16■□□□□ 0.5
TSKU-204ENST00000533752 PTGS1P23219 599 aa18.16■□□□□ 0.5
TSKU-204ENST00000533752 AP3B2Q13367 1082 aa18.16■□□□□ 0.5
TSKU-204ENST00000533752 UBE2SQ16763 222 aa18.16■□□□□ 0.5
TSKU-204ENST00000533752 LY6KQ17RY6 165 aa18.16■□□□□ 0.5
TSKU-204ENST00000533752 MCTP2Q6DN12 878 aa18.16■□□□□ 0.5
TSKU-204ENST00000533752 CCDC148Q8NFR7 591 aa18.16■□□□□ 0.5
TSKU-204ENST00000533752 PHKBQ93100 1093 aa18.16■□□□□ 0.5
TSKU-204ENST00000533752 INPP4AQ96PE3 977 aaPredicted RBP18.16■□□□□ 0.5
TSKU-204ENST00000533752 NCOA5Q9HCD5 579 aaKnown RBP18.16■□□□□ 0.5
TSKU-204ENST00000533752 SMCO2A6NFE2 343 aa18.15■□□□□ 0.5
TSKU-204ENST00000533752 ARVCFO00192 962 aa18.15■□□□□ 0.5
TSKU-204ENST00000533752 FIBPO43427 364 aa18.15■□□□□ 0.5
TSKU-204ENST00000533752 PQBP1O60828 265 aaKnown RBP18.15■□□□□ 0.5
TSKU-204ENST00000533752 CLTBP09497 229 aa18.15■□□□□ 0.5
TSKU-204ENST00000533752 TLE2Q04725 743 aa18.15■□□□□ 0.5
TSKU-204ENST00000533752 ARHGAP1Q07960 439 aa18.15■□□□□ 0.5
TSKU-204ENST00000533752 LAMC2Q13753 1193 aa18.15■□□□□ 0.5
TSKU-204ENST00000533752 TYW1BQ6NUM6 668 aa18.15■□□□□ 0.5
TSKU-204ENST00000533752 COPS5Q92905 334 aa18.15■□□□□ 0.5
TSKU-204ENST00000533752 CDHR1Q96JP9 859 aa18.15■□□□□ 0.5
TSKU-204ENST00000533752 MTG1Q9BT17 334 aaPredicted RBP18.15■□□□□ 0.5
TSKU-204ENST00000533752 SLC26A6Q9BXS9 759 aa18.15■□□□□ 0.5
TSKU-204ENST00000533752 SLKQ9H2G2 1235 aaPredicted RBP18.15■□□□□ 0.5
TSKU-204ENST00000533752 RGS20O76081 388 aa18.14■□□□□ 0.49
TSKU-204ENST00000533752 MYL3P08590 195 aa18.14■□□□□ 0.49
TSKU-204ENST00000533752 SYN1P17600 705 aa18.14■□□□□ 0.49
TSKU-204ENST00000533752 GNA11P29992 359 aa18.14■□□□□ 0.49
TSKU-204ENST00000533752 ICAM3P32942 547 aa18.14■□□□□ 0.49
TSKU-204ENST00000533752 MRPS9P82933 396 aaKnown RBP18.14■□□□□ 0.49
TSKU-204ENST00000533752 PURAQ00577 322 aaKnown RBP18.14■□□□□ 0.49
TSKU-204ENST00000533752 SSRP1Q08945 709 aaKnown RBP18.14■□□□□ 0.49
TSKU-204ENST00000533752 CHRDL2Q6WN34 429 aa18.14■□□□□ 0.49
TSKU-204ENST00000533752 NLRX1Q86UT6 975 aa18.14■□□□□ 0.49
TSKU-204ENST00000533752 BICD2Q8TD16 824 aa18.14■□□□□ 0.49
TSKU-204ENST00000533752 LBHD1Q9BQE6 289 aaPredicted RBP18.14■□□□□ 0.49
TSKU-204ENST00000533752 ZMYND12Q9H0C1 365 aa18.14■□□□□ 0.49
TSKU-204ENST00000533752 C6orf50Q9HD87 102 aa18.14■□□□□ 0.49
TSKU-204ENST00000533752 PRDM5Q9NQX1 630 aaPredicted RBP18.14■□□□□ 0.49
TSKU-204ENST00000533752 PDLIM7Q9NR12 457 aa18.14■□□□□ 0.49
TSKU-204ENST00000533752 PCDHA6Q9UN73 950 aa18.14■□□□□ 0.49
TSKU-204ENST00000533752 PCDHA8Q9Y5H6 950 aa18.14■□□□□ 0.49
TSKU-204ENST00000533752 DNAH12Q6ZR08 3092 aa18.14■□□□□ 0.49
TSKU-204ENST00000533752 TLR3O15455 904 aaKnown RBP18.13■□□□□ 0.49
TSKU-204ENST00000533752 DEXIO95424 95 aa18.13■□□□□ 0.49
TSKU-204ENST00000533752 MMP3P08254 477 aa18.13■□□□□ 0.49
TSKU-204ENST00000533752 UBA1P22314 1058 aaKnown RBP18.13■□□□□ 0.49
TSKU-204ENST00000533752 CDK7P50613 346 aa18.13■□□□□ 0.49
TSKU-204ENST00000533752 AK2P54819 239 aa18.13■□□□□ 0.49
TSKU-204ENST00000533752 STK3Q13188 491 aa18.13■□□□□ 0.49
TSKU-204ENST00000533752 ITGA7Q13683 1181 aa18.13■□□□□ 0.49
TSKU-204ENST00000533752 PKN1Q16512 942 aa18.13■□□□□ 0.49
TSKU-204ENST00000533752 DHX37Q8IY37 1157 aaKnown RBP18.13■□□□□ 0.49
TSKU-204ENST00000533752 FAM177A1Q8N128 213 aaPredicted RBP18.13■□□□□ 0.49
TSKU-204ENST00000533752 SLC43A3Q8NBI5 491 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms