RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 BFSP2Q13515 415 aa18.39■□□□□ 0.53
CHMP4A-207ENST00000533523 CDC37Q16543 378 aaPredicted RBP18.39■□□□□ 0.53
CHMP4A-207ENST00000533523 GPATCH4Q5T3I0 446 aaKnown RBP18.39■□□□□ 0.53
CHMP4A-207ENST00000533523 ZKSCAN3Q9BRR0 538 aa18.39■□□□□ 0.53
CHMP4A-207ENST00000533523 RNF41Q9H4P4 317 aaPredicted RBP18.39■□□□□ 0.53
CHMP4A-207ENST00000533523 SIP14410 1827 aa18.39■□□□□ 0.53
CHMP4A-207ENST00000533523 BAZ2BQ9UIF8 2168 aaKnown RBP18.38■□□□□ 0.53
CHMP4A-207ENST00000533523 IQCF3P0C7M6 154 aa18.38■□□□□ 0.53
CHMP4A-207ENST00000533523 SDSP20132 328 aa18.38■□□□□ 0.53
CHMP4A-207ENST00000533523 CCDC155Q8N6L0 562 aa18.38■□□□□ 0.53
CHMP4A-207ENST00000533523 ARNTL2Q8WYA1 636 aa18.38■□□□□ 0.53
CHMP4A-207ENST00000533523 ESR2Q92731 530 aa18.38■□□□□ 0.53
CHMP4A-207ENST00000533523 TTC14Q96N46 770 aa18.38■□□□□ 0.53
CHMP4A-207ENST00000533523 UBA5Q9GZZ9 404 aa18.38■□□□□ 0.53
CHMP4A-207ENST00000533523 DIAPH3Q9NSV4 1193 aa18.38■□□□□ 0.53
CHMP4A-207ENST00000533523 ARIH1Q9Y4X5 557 aaPredicted RBP18.38■□□□□ 0.53
CHMP4A-207ENST00000533523 MICAL3Q7RTP6 2002 aa18.37■□□□□ 0.53
CHMP4A-207ENST00000533523 POU3F3P20264 500 aaPredicted RBP18.37■□□□□ 0.53
CHMP4A-207ENST00000533523 KCNJ6P48051 423 aa18.37■□□□□ 0.53
CHMP4A-207ENST00000533523 PTPN11Q06124 597 aaPredicted RBP18.37■□□□□ 0.53
CHMP4A-207ENST00000533523 PTGISQ16647 500 aa18.37■□□□□ 0.53
CHMP4A-207ENST00000533523 AAK1Q2M2I8 961 aa18.37■□□□□ 0.53
CHMP4A-207ENST00000533523 SEPT14Q6ZU15 432 aa18.37■□□□□ 0.53
CHMP4A-207ENST00000533523 CHST3Q7LGC8 479 aa18.37■□□□□ 0.53
CHMP4A-207ENST00000533523 HERC6Q8IVU3 1022 aa18.37■□□□□ 0.53
CHMP4A-207ENST00000533523 AFG1LQ8WV93 481 aa18.37■□□□□ 0.53
CHMP4A-207ENST00000533523 ABCB11O95342 1321 aa18.37■□□□□ 0.53
CHMP4A-207ENST00000533523 KIF28PB7ZC32 967 aa18.36■□□□□ 0.53
CHMP4A-207ENST00000533523 DHX16O60231 1041 aaKnown RBP18.36■□□□□ 0.53
CHMP4A-207ENST00000533523 LPXNO60711 386 aa18.36■□□□□ 0.53
CHMP4A-207ENST00000533523 MMP3P08254 477 aa18.36■□□□□ 0.53
CHMP4A-207ENST00000533523 LY6KQ17RY6 165 aa18.36■□□□□ 0.53
CHMP4A-207ENST00000533523 ZNF318Q5VUA4 2279 aa18.36■□□□□ 0.53
CHMP4A-207ENST00000533523 PNMA1Q8ND90 353 aa18.36■□□□□ 0.53
CHMP4A-207ENST00000533523 BAIAP3O94812 1187 aa18.35■□□□□ 0.53
CHMP4A-207ENST00000533523 GH1P01241 217 aa18.35■□□□□ 0.53
CHMP4A-207ENST00000533523 TAP1Q03518 808 aa18.35■□□□□ 0.53
CHMP4A-207ENST00000533523 TTC22Q5TAA0 569 aa18.35■□□□□ 0.53
CHMP4A-207ENST00000533523 GDF6Q6KF10 455 aaPredicted RBP18.35■□□□□ 0.53
CHMP4A-207ENST00000533523 IQCA1Q86XH1 822 aa18.35■□□□□ 0.53
CHMP4A-207ENST00000533523 RGS22Q8NE09 1264 aa18.35■□□□□ 0.53
CHMP4A-207ENST00000533523 CAGE1Q8TC20 777 aa18.35■□□□□ 0.53
CHMP4A-207ENST00000533523 PHOSPHO2Q8TCD6 241 aa18.35■□□□□ 0.53
CHMP4A-207ENST00000533523 KAT14Q9H8E8 782 aa18.35■□□□□ 0.53
CHMP4A-207ENST00000533523 MYO15AQ9UKN7 3530 aa18.35■□□□□ 0.53
CHMP4A-207ENST00000533523 ATG2AQ2TAZ0 1938 aa18.34■□□□□ 0.53
CHMP4A-207ENST00000533523 KDM4AO75164 1064 aa18.34■□□□□ 0.53
CHMP4A-207ENST00000533523 ARHGAP1Q07960 439 aa18.34■□□□□ 0.53
CHMP4A-207ENST00000533523 CCDC62Q6P9F0 684 aa18.34■□□□□ 0.53
CHMP4A-207ENST00000533523 ADGRF4Q8IZF3 695 aa18.34■□□□□ 0.53
CHMP4A-207ENST00000533523 SYTL5Q8TDW5 730 aaPredicted RBP18.34■□□□□ 0.53
CHMP4A-207ENST00000533523 NSUN6Q8TEA1 469 aaKnown RBP18.34■□□□□ 0.53
CHMP4A-207ENST00000533523 AFAP1L1Q8TED9 768 aa18.34■□□□□ 0.53
CHMP4A-207ENST00000533523 TBC1D5Q92609 795 aa18.34■□□□□ 0.53
CHMP4A-207ENST00000533523 TAAR1Q96RJ0 339 aa18.34■□□□□ 0.53
CHMP4A-207ENST00000533523 COL20A1Q9P218 1284 aa18.34■□□□□ 0.53
CHMP4A-207ENST00000533523 DOCK5Q9H7D0 1870 aa18.34■□□□□ 0.53
CHMP4A-207ENST00000533523 ZNF213O14771 459 aa18.33■□□□□ 0.52
CHMP4A-207ENST00000533523 EIF2AK2P19525 551 aaKnown RBP18.33■□□□□ 0.52
CHMP4A-207ENST00000533523 WDR5P61964 334 aaKnown RBP18.33■□□□□ 0.52
CHMP4A-207ENST00000533523 QRICH1Q2TAL8 776 aa18.33■□□□□ 0.52
CHMP4A-207ENST00000533523 ASPRV1Q53RT3 343 aa18.33■□□□□ 0.52
CHMP4A-207ENST00000533523 TMEM31Q5JXX7 168 aa18.33■□□□□ 0.52
CHMP4A-207ENST00000533523 LRRC8DQ7L1W4 858 aa18.33■□□□□ 0.52
CHMP4A-207ENST00000533523 DGKHQ86XP1 1220 aa18.33■□□□□ 0.52
CHMP4A-207ENST00000533523 RMDN3Q96TC7 470 aa18.33■□□□□ 0.52
CHMP4A-207ENST00000533523 DMDP11532 3685 aa18.32■□□□□ 0.52
CHMP4A-207ENST00000533523 B4E1Z4 1266 aa18.32■□□□□ 0.52
CHMP4A-207ENST00000533523 GPR37L1O60883 481 aa18.32■□□□□ 0.52
CHMP4A-207ENST00000533523 ZNF286BP0CG31 522 aa18.32■□□□□ 0.52
CHMP4A-207ENST00000533523 SELPP16109 830 aa18.32■□□□□ 0.52
CHMP4A-207ENST00000533523 STXBP2Q15833 593 aa18.32■□□□□ 0.52
CHMP4A-207ENST00000533523 DGKDQ16760 1214 aa18.32■□□□□ 0.52
CHMP4A-207ENST00000533523 CCDC178Q5BJE1 867 aa18.32■□□□□ 0.52
CHMP4A-207ENST00000533523 ARHGEF16Q5VV41 709 aa18.32■□□□□ 0.52
CHMP4A-207ENST00000533523 CWC27Q6UX04 472 aaKnown RBP18.32■□□□□ 0.52
CHMP4A-207ENST00000533523 TMCO2Q7Z6W1 182 aaPredicted RBP18.32■□□□□ 0.52
CHMP4A-207ENST00000533523 ALYREFQ86V81 257 aaKnown RBP18.32■□□□□ 0.52
CHMP4A-207ENST00000533523 SESTD1Q86VW0 696 aa18.32■□□□□ 0.52
CHMP4A-207ENST00000533523 FBXO11Q86XK2 927 aa18.32■□□□□ 0.52
CHMP4A-207ENST00000533523 MCF2L2Q86YR7 1114 aa18.32■□□□□ 0.52
CHMP4A-207ENST00000533523 GDPD5Q8WTR4 605 aa18.32■□□□□ 0.52
CHMP4A-207ENST00000533523 DHX38Q92620 1227 aaKnown RBP18.32■□□□□ 0.52
CHMP4A-207ENST00000533523 KAT2BQ92831 832 aa18.32■□□□□ 0.52
CHMP4A-207ENST00000533523 CTAGE1Q96RT6 745 aa18.32■□□□□ 0.52
CHMP4A-207ENST00000533523 ALG1Q9BT22 464 aa18.32■□□□□ 0.52
CHMP4A-207ENST00000533523 ZBED2Q9BTP6 218 aa18.32■□□□□ 0.52
CHMP4A-207ENST00000533523 HCN4Q9Y3Q4 1203 aa18.32■□□□□ 0.52
CHMP4A-207ENST00000533523 NLRC5Q86WI3 1866 aa18.31■□□□□ 0.52
CHMP4A-207ENST00000533523 LCHNA4D1U4 455 aa18.31■□□□□ 0.52
CHMP4A-207ENST00000533523 CASTP20810 708 aaKnown RBP18.31■□□□□ 0.52
CHMP4A-207ENST00000533523 DEFB103AP81534 67 aa18.31■□□□□ 0.52
CHMP4A-207ENST00000533523 GRB10Q13322 594 aa18.31■□□□□ 0.52
CHMP4A-207ENST00000533523 C7orf31Q8N865 590 aa18.31■□□□□ 0.52
CHMP4A-207ENST00000533523 ENAHQ8N8S7 591 aaPredicted RBP18.31■□□□□ 0.52
CHMP4A-207ENST00000533523 IWS1Q96ST2 819 aa18.31■□□□□ 0.52
CHMP4A-207ENST00000533523 ZSCAN10Q96SZ4 725 aaPredicted RBP18.31■□□□□ 0.52
CHMP4A-207ENST00000533523 VAT1LQ9HCJ6 419 aa18.31■□□□□ 0.52
CHMP4A-207ENST00000533523 COG5Q9UP83 839 aa18.31■□□□□ 0.52
CHMP4A-207ENST00000533523 MRPL11Q9Y3B7 192 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms