RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, human

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-223	ENST00000533299	MRPL4	Q9BYD3	311 aa	Known RBP	4.89	□□□□□ -1.63
LMO7-223	ENST00000533299	SLK	Q9H2G2	1235 aa	Predicted RBP	4.89	□□□□□ -1.63
LMO7-223	ENST00000533299	CRTAC1	Q9NQ79	661 aa		4.89	□□□□□ -1.63
LMO7-223	ENST00000533299	C19orf73	Q9NVV2	129 aa		4.89	□□□□□ -1.63
LMO7-223	ENST00000533299	ESYT3	A0FGR9	886 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	C7orf72	A4D263	438 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	PLD2	O14939	933 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	SASH1	O94885	1247 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	PRKCA	P17252	672 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	CYP4F8	P98187	520 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	SQSTM1	Q13501	440 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	FOXB2	Q5VYV0	432 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	STYK1	Q6J9G0	422 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	PHF20	Q9BVI0	1012 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	SLC6A17	Q9H1V8	727 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	PDLIM7	Q9NR12	457 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	IMPACT	Q9P2X3	320 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	EBF1	Q9UH73	591 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	ACSL6	Q9UKU0	697 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	NPFFR2	Q9Y5X5	522 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	TRIM13	O60858	407 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	PNLIP	P16233	465 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	CANX	P27824	592 aa	Known RBP	4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	ERVFC1	P60507	584 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	CYP4F3	Q08477	520 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	TMEM62	Q0P6H9	643 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	LSAMP	Q13449	338 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	FNDC3B	Q53EP0	1204 aa	Known RBP	4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	LZTR1	Q8N653	840 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	ALG1	Q9BT22	464 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	C19orf44	Q9H6X5	657 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	SFMBT1	Q9UHJ3	866 aa		4.88	□□□□□ -1.63
LMO7-223	ENST00000533299	SMARCA5	O60264	1052 aa	Predicted RBP	4.87	□□□□□ -1.63
LMO7-223	ENST00000533299	ASMTL	O95671	621 aa		4.87	□□□□□ -1.63
LMO7-223	ENST00000533299	GPR85	P60893	370 aa		4.87	□□□□□ -1.63
LMO7-223	ENST00000533299	MTDH	Q86UE4	582 aa	Known RBP	4.87	□□□□□ -1.63
LMO7-223	ENST00000533299	NLRX1	Q86UT6	975 aa		4.87	□□□□□ -1.63
LMO7-223	ENST00000533299	RCBTB1	Q8NDN9	531 aa		4.87	□□□□□ -1.63
LMO7-223	ENST00000533299	TRMT2B	Q96GJ1	504 aa	Known RBP	4.87	□□□□□ -1.63
LMO7-223	ENST00000533299	FEZ1	Q99689	392 aa		4.87	□□□□□ -1.63
LMO7-223	ENST00000533299	NCOA5	Q9HCD5	579 aa	Known RBP	4.87	□□□□□ -1.63
LMO7-223	ENST00000533299	COA3	Q9Y2R0	106 aa	Predicted RBP	4.87	□□□□□ -1.63
LMO7-223	ENST00000533299	PCDHA2	Q9Y5H9	948 aa		4.87	□□□□□ -1.63
LMO7-223	ENST00000533299		H7BY64	318 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	INF2	Q27J81	1249 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	KIZ	Q2M2Z5	673 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	OLFML2B	Q68BL8	750 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	DENND5A	Q6IQ26	1287 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	CCDC103	Q8IW40	242 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	TMEM169	Q96HH4	297 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	MAGEB10	Q96LZ2	347 aa	Predicted RBP	4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	TMX1	Q9H3N1	280 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	KCNK12	Q9HB15	430 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	BTG4	Q9NY30	223 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	NDOR1	Q9UHB4	597 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	TMEFF2	Q9UIK5	374 aa	Predicted RBP	4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	YBX2	Q9Y2T7	364 aa	Known RBP	4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	ADAMTS20	P59510	1910 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	BLACE	A4D250	179 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	GSTA4	O15217	222 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	RFPL3	O75679	317 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	MPO	P05164	745 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	TRHR	P34981	398 aa	Predicted RBP	4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	NTRK3	Q16288	839 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	PLEKHG4	Q58EX7	1191 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	TRIM61	Q5EBN2	209 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	BICRAL	Q6AI39	1079 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	CEP68	Q76N32	757 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	PANK1	Q8TE04	598 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	GPR20	Q99678	358 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	RNF32	Q9H0A6	362 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	KANSL2	Q9H9L4	492 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	MARCH2	Q9P0N8	246 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	GULP1	Q9UBP9	304 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	NUDT5	Q9UKK9	219 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299	PLAA	Q9Y263	795 aa		4.86	□□□□□ -1.63
LMO7-223	ENST00000533299		B4E1Z4	1266 aa		4.85	□□□□□ -1.63
LMO7-223	ENST00000533299	ABLIM1	O14639	778 aa		4.85	□□□□□ -1.63
LMO7-223	ENST00000533299	KCNQ2	O43526	872 aa		4.85	□□□□□ -1.63
LMO7-223	ENST00000533299	FUCA1	P04066	466 aa		4.85	□□□□□ -1.63
LMO7-223	ENST00000533299	PDE6B	P35913	854 aa		4.85	□□□□□ -1.63
LMO7-223	ENST00000533299	BCL6	P41182	706 aa		4.85	□□□□□ -1.63
LMO7-223	ENST00000533299	ZXDA	P98168	799 aa		4.85	□□□□□ -1.63
LMO7-223	ENST00000533299	GUCY1A3	Q02108	690 aa		4.85	□□□□□ -1.63
LMO7-223	ENST00000533299	MVK	Q03426	396 aa		4.85	□□□□□ -1.63
LMO7-223	ENST00000533299	NR1I3	Q14994	352 aa		4.85	□□□□□ -1.63
LMO7-223	ENST00000533299	CHRNA2	Q15822	529 aa		4.85	□□□□□ -1.63
LMO7-223	ENST00000533299	ZNF385B	Q569K4	471 aa		4.85	□□□□□ -1.63
LMO7-223	ENST00000533299	MROH9	Q5TGP6	573 aa		4.85	□□□□□ -1.63
LMO7-223	ENST00000533299	KCNT2	Q6UVM3	1135 aa		4.85	□□□□□ -1.63
LMO7-223	ENST00000533299	LBX2	Q6XYB7	198 aa		4.85	□□□□□ -1.63
LMO7-223	ENST00000533299	IRF2BP1	Q8IU81	584 aa		4.85	□□□□□ -1.63
LMO7-223	ENST00000533299	SIRT2	Q8IXJ6	389 aa		4.85	□□□□□ -1.63
LMO7-223	ENST00000533299	PLCD4	Q9BRC7	762 aa		4.85	□□□□□ -1.63
LMO7-223	ENST00000533299	SP110	Q9HB58	689 aa		4.85	□□□□□ -1.63
LMO7-223	ENST00000533299	CLDND1	Q9NY35	253 aa		4.85	□□□□□ -1.63
LMO7-223	ENST00000533299	RWDD3	Q9Y3V2	267 aa		4.85	□□□□□ -1.63
LMO7-223	ENST00000533299	NUB1	Q9Y5A7	615 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms