RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 A6NJR5 290 aa14.91□□□□□ -0.02
TRAPPC4-212ENST00000533058 DCDC2CA8MYV0 355 aa14.91□□□□□ -0.02
TRAPPC4-212ENST00000533058 CPLX1O14810 134 aa14.91□□□□□ -0.02
TRAPPC4-212ENST00000533058 TXNP10599 105 aaKnown RBP14.91□□□□□ -0.02
TRAPPC4-212ENST00000533058 CPT1AP50416 773 aa14.91□□□□□ -0.02
TRAPPC4-212ENST00000533058 BEX3Q00994 111 aa14.91□□□□□ -0.02
TRAPPC4-212ENST00000533058 BRDTQ58F21 947 aaPredicted RBP14.91□□□□□ -0.02
TRAPPC4-212ENST00000533058 TMTC3Q6ZXV5 915 aa14.91□□□□□ -0.02
TRAPPC4-212ENST00000533058 TEX2Q8IWB9 1127 aa14.91□□□□□ -0.02
TRAPPC4-212ENST00000533058 ZNF274Q96GC6 653 aaPredicted RBP14.91□□□□□ -0.02
TRAPPC4-212ENST00000533058 LBHD1Q9BQE6 289 aaPredicted RBP14.91□□□□□ -0.02
TRAPPC4-212ENST00000533058 PDCD2LQ9BRP1 358 aa14.91□□□□□ -0.02
TRAPPC4-212ENST00000533058 NCOA5Q9HCD5 579 aaKnown RBP14.91□□□□□ -0.02
TRAPPC4-212ENST00000533058 POLR3EQ9NVU0 708 aa14.91□□□□□ -0.02
TRAPPC4-212ENST00000533058 SEC63Q9UGP8 760 aaKnown RBP14.91□□□□□ -0.02
TRAPPC4-212ENST00000533058 TPCN1Q9ULQ1 816 aa14.91□□□□□ -0.02
TRAPPC4-212ENST00000533058 TRIM43BA6NCK2 446 aa14.9□□□□□ -0.02
TRAPPC4-212ENST00000533058 PIK3CDO00329 1044 aa14.9□□□□□ -0.02
TRAPPC4-212ENST00000533058 KPNA6O60684 536 aa14.9□□□□□ -0.02
TRAPPC4-212ENST00000533058 CDC27P30260 824 aa14.9□□□□□ -0.02
TRAPPC4-212ENST00000533058 FAAP100Q0VG06 881 aa14.9□□□□□ -0.02
TRAPPC4-212ENST00000533058 LRIT3Q3SXY7 679 aa14.9□□□□□ -0.02
TRAPPC4-212ENST00000533058 CPLX2Q6PUV4 134 aaKnown RBP14.9□□□□□ -0.02
TRAPPC4-212ENST00000533058 CXCL17Q6UXB2 119 aa14.9□□□□□ -0.02
TRAPPC4-212ENST00000533058 VSIG10LQ86VR7 867 aa14.9□□□□□ -0.02
TRAPPC4-212ENST00000533058 TDHQ8IZJ6 230 aa14.9□□□□□ -0.02
TRAPPC4-212ENST00000533058 TRIM43Q96BQ3 446 aaPredicted RBP14.9□□□□□ -0.02
TRAPPC4-212ENST00000533058 UBE2OQ9C0C9 1292 aaKnown RBP14.9□□□□□ -0.02
TRAPPC4-212ENST00000533058 LIMCH1Q9UPQ0 1083 aa14.9□□□□□ -0.02
TRAPPC4-212ENST00000533058 PQBP1O60828 265 aaKnown RBP14.89□□□□□ -0.03
TRAPPC4-212ENST00000533058 EIF2AK2P19525 551 aaKnown RBP14.89□□□□□ -0.03
TRAPPC4-212ENST00000533058 HOXA13P31271 388 aaPredicted RBP14.89□□□□□ -0.03
TRAPPC4-212ENST00000533058 ADD1P35611 737 aaKnown RBP14.89□□□□□ -0.03
TRAPPC4-212ENST00000533058 EVCP57679 992 aa14.89□□□□□ -0.03
TRAPPC4-212ENST00000533058 PURAQ00577 322 aaKnown RBP14.89□□□□□ -0.03
TRAPPC4-212ENST00000533058 MDM2Q00987 491 aaPredicted RBP14.89□□□□□ -0.03
TRAPPC4-212ENST00000533058 AKAP17AQ02040 695 aaKnown RBP14.89□□□□□ -0.03
TRAPPC4-212ENST00000533058 PGM5Q15124 567 aa14.89□□□□□ -0.03
TRAPPC4-212ENST00000533058 KCNV1Q6PIU1 500 aa14.89□□□□□ -0.03
TRAPPC4-212ENST00000533058 SH3RF1Q7Z6J0 888 aa14.89□□□□□ -0.03
TRAPPC4-212ENST00000533058 OR6J1Q8NGC5 347 aa14.89□□□□□ -0.03
TRAPPC4-212ENST00000533058 EMID1Q96A84 441 aaPredicted RBP14.89□□□□□ -0.03
TRAPPC4-212ENST00000533058 VTI1AQ96AJ9 217 aa14.89□□□□□ -0.03
TRAPPC4-212ENST00000533058 PRDM5Q9NQX1 630 aaPredicted RBP14.89□□□□□ -0.03
TRAPPC4-212ENST00000533058 TMEM39AQ9NV64 488 aa14.89□□□□□ -0.03
TRAPPC4-212ENST00000533058 TBX21Q9UL17 535 aa14.89□□□□□ -0.03
TRAPPC4-212ENST00000533058 FRMPD4Q14CM0 1322 aa14.89□□□□□ -0.03
TRAPPC4-212ENST00000533058 BAZ2BQ9UIF8 2168 aaKnown RBP14.88□□□□□ -0.03
TRAPPC4-212ENST00000533058 MYH6P13533 1939 aa14.88□□□□□ -0.03
TRAPPC4-212ENST00000533058 hCG_1642624A0A1W2PR95 340 aa14.88□□□□□ -0.03
TRAPPC4-212ENST00000533058 TLR3O15455 904 aaKnown RBP14.88□□□□□ -0.03
TRAPPC4-212ENST00000533058 STAM2O75886 525 aa14.88□□□□□ -0.03
TRAPPC4-212ENST00000533058 ARIH2O95376 493 aa14.88□□□□□ -0.03
TRAPPC4-212ENST00000533058 CD4P01730 458 aa14.88□□□□□ -0.03
TRAPPC4-212ENST00000533058 TGFB3P10600 412 aa14.88□□□□□ -0.03
TRAPPC4-212ENST00000533058 PTGS1P23219 599 aa14.88□□□□□ -0.03
TRAPPC4-212ENST00000533058 FUT2Q10981 343 aa14.88□□□□□ -0.03
TRAPPC4-212ENST00000533058 ITGA7Q13683 1181 aa14.88□□□□□ -0.03
TRAPPC4-212ENST00000533058 SEPT14Q6ZU15 432 aa14.88□□□□□ -0.03
TRAPPC4-212ENST00000533058 FAM126BQ8IXS8 530 aa14.88□□□□□ -0.03
TRAPPC4-212ENST00000533058 PIAS4Q8N2W9 510 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC4-212ENST00000533058 ZSCAN31Q96LW9 406 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC4-212ENST00000533058 DDX41Q9UJV9 622 aaKnown RBP14.88□□□□□ -0.03
TRAPPC4-212ENST00000533058 GRIN2DO15399 1336 aa14.88□□□□□ -0.03
TRAPPC4-212ENST00000533058 MEIS2O14770 477 aa14.87□□□□□ -0.03
TRAPPC4-212ENST00000533058 PFKFB2O60825 505 aa14.87□□□□□ -0.03
TRAPPC4-212ENST00000533058 PPFIA3O75145 1194 aa14.87□□□□□ -0.03
TRAPPC4-212ENST00000533058 RGS20O76081 388 aa14.87□□□□□ -0.03
TRAPPC4-212ENST00000533058 GH1P01241 217 aa14.87□□□□□ -0.03
TRAPPC4-212ENST00000533058 RAG1P15918 1043 aa14.87□□□□□ -0.03
TRAPPC4-212ENST00000533058 ME3Q16798 604 aa14.87□□□□□ -0.03
TRAPPC4-212ENST00000533058 GPR153Q6NV75 609 aa14.87□□□□□ -0.03
TRAPPC4-212ENST00000533058 XRRA1Q6P2D8 792 aa14.87□□□□□ -0.03
TRAPPC4-212ENST00000533058 NECAB1Q8N987 351 aa14.87□□□□□ -0.03
TRAPPC4-212ENST00000533058 IL27Q8NEV9 243 aa14.87□□□□□ -0.03
TRAPPC4-212ENST00000533058 COPS5Q92905 334 aa14.87□□□□□ -0.03
TRAPPC4-212ENST00000533058 CUL5Q93034 780 aa14.87□□□□□ -0.03
TRAPPC4-212ENST00000533058 MTG1Q9BT17 334 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC4-212ENST00000533058 SLC26A6Q9BXS9 759 aa14.87□□□□□ -0.03
TRAPPC4-212ENST00000533058 FAM217BQ9NTX9 383 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC4-212ENST00000533058 V9GY48 417 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC4-212ENST00000533058 hCG_1984214I3L0E3 225 aa14.86□□□□□ -0.03
TRAPPC4-212ENST00000533058 CDKL5O76039 1030 aa14.86□□□□□ -0.03
TRAPPC4-212ENST00000533058 LARGE1O95461 756 aa14.86□□□□□ -0.03
TRAPPC4-212ENST00000533058 TIMP1P01033 207 aa14.86□□□□□ -0.03
TRAPPC4-212ENST00000533058 ITGB8P26012 769 aa14.86□□□□□ -0.03
TRAPPC4-212ENST00000533058 CCND2P30279 289 aa14.86□□□□□ -0.03
TRAPPC4-212ENST00000533058 MCM2P49736 904 aa14.86□□□□□ -0.03
TRAPPC4-212ENST00000533058 ARHGAP1Q07960 439 aa14.86□□□□□ -0.03
TRAPPC4-212ENST00000533058 SSRP1Q08945 709 aaKnown RBP14.86□□□□□ -0.03
TRAPPC4-212ENST00000533058 SCRN1Q12765 414 aa14.86□□□□□ -0.03
TRAPPC4-212ENST00000533058 LAMC2Q13753 1193 aa14.86□□□□□ -0.03
TRAPPC4-212ENST00000533058 LY6KQ17RY6 165 aa14.86□□□□□ -0.03
TRAPPC4-212ENST00000533058 FCHSD1Q86WN1 690 aa14.86□□□□□ -0.03
TRAPPC4-212ENST00000533058 TRIM22Q8IYM9 498 aa14.86□□□□□ -0.03
TRAPPC4-212ENST00000533058 ZNF713Q8N859 430 aaPredicted RBP14.86□□□□□ -0.03
TRAPPC4-212ENST00000533058 SMARCC2Q8TAQ2 1214 aa14.86□□□□□ -0.03
TRAPPC4-212ENST00000533058 BADQ92934 168 aa14.86□□□□□ -0.03
TRAPPC4-212ENST00000533058 PHKBQ93100 1093 aa14.86□□□□□ -0.03
TRAPPC4-212ENST00000533058 PSTPIP2Q9H939 334 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms