RNA–Protein interactions for RNA: ENST00000532884.1

PUF60-220, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5

Gene PUF60, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-220ENST00000532884 CHMP4BP1P59074 171 aa16.63■□□□□ 0.25
PUF60-220ENST00000532884 PSMC6P62333 389 aa16.63■□□□□ 0.25
PUF60-220ENST00000532884 NKX3-2P78367 333 aa16.63■□□□□ 0.25
PUF60-220ENST00000532884 MDM2Q00987 491 aaPredicted RBP16.63■□□□□ 0.25
PUF60-220ENST00000532884 STK3Q13188 491 aa16.63■□□□□ 0.25
PUF60-220ENST00000532884 SNX17Q15036 470 aa16.63■□□□□ 0.25
PUF60-220ENST00000532884 CCDC62Q6P9F0 684 aa16.63■□□□□ 0.25
PUF60-220ENST00000532884 PHKBQ93100 1093 aa16.63■□□□□ 0.25
PUF60-220ENST00000532884 RTEL1Q9NZ71 1219 aa16.63■□□□□ 0.25
PUF60-220ENST00000532884 RBM27Q9P2N5 1060 aaKnown RBP16.63■□□□□ 0.25
PUF60-220ENST00000532884 ELP1O95163 1332 aa16.63■□□□□ 0.25
PUF60-220ENST00000532884 PIK3CDO00329 1044 aa16.62■□□□□ 0.25
PUF60-220ENST00000532884 EIF5BO60841 1220 aaKnown RBP16.62■□□□□ 0.25
PUF60-220ENST00000532884 GH1P01241 217 aa16.62■□□□□ 0.25
PUF60-220ENST00000532884 MAGEA10P43363 369 aaPredicted RBP16.62■□□□□ 0.25
PUF60-220ENST00000532884 CPT1AP50416 773 aa16.62■□□□□ 0.25
PUF60-220ENST00000532884 AKAP17AQ02040 695 aaKnown RBP16.62■□□□□ 0.25
PUF60-220ENST00000532884 BRDTQ58F21 947 aaPredicted RBP16.62■□□□□ 0.25
PUF60-220ENST00000532884 TYW1BQ6NUM6 668 aa16.62■□□□□ 0.25
PUF60-220ENST00000532884 SH3RF1Q7Z6J0 888 aa16.62■□□□□ 0.25
PUF60-220ENST00000532884 AFG1LQ8WV93 481 aa16.62■□□□□ 0.25
PUF60-220ENST00000532884 LBHD1Q9BQE6 289 aaPredicted RBP16.62■□□□□ 0.25
PUF60-220ENST00000532884 DDX41Q9UJV9 622 aaKnown RBP16.62■□□□□ 0.25
PUF60-220ENST00000532884 A0A0U1RQG5 324 aaPredicted RBP16.61■□□□□ 0.25
PUF60-220ENST00000532884 SMCO2A6NFE2 343 aa16.61■□□□□ 0.25
PUF60-220ENST00000532884 SPDYE3A6NKU9 549 aa16.61■□□□□ 0.25
PUF60-220ENST00000532884 DCDC2CA8MYV0 355 aa16.61■□□□□ 0.25
PUF60-220ENST00000532884 STXBP3O00186 592 aa16.61■□□□□ 0.25
PUF60-220ENST00000532884 RGS20O76081 388 aa16.61■□□□□ 0.25
PUF60-220ENST00000532884 ANAPC15P60006 121 aa16.61■□□□□ 0.25
PUF60-220ENST00000532884 C1orf53Q5VUE5 145 aa16.61■□□□□ 0.25
PUF60-220ENST00000532884 PPP1R13LQ8WUF5 828 aa16.61■□□□□ 0.25
PUF60-220ENST00000532884 SLC26A6Q9BXS9 759 aa16.61■□□□□ 0.25
PUF60-220ENST00000532884 TRIM43BA6NCK2 446 aa16.6■□□□□ 0.25
PUF60-220ENST00000532884 ARVCFO00192 962 aa16.6■□□□□ 0.25
PUF60-220ENST00000532884 CABYRO75952 493 aa16.6■□□□□ 0.25
PUF60-220ENST00000532884 CLTBP09497 229 aa16.6■□□□□ 0.25
PUF60-220ENST00000532884 SCG2P13521 617 aa16.6■□□□□ 0.25
PUF60-220ENST00000532884 ADCY7P51828 1080 aa16.6■□□□□ 0.25
PUF60-220ENST00000532884 EVCP57679 992 aa16.6■□□□□ 0.25
PUF60-220ENST00000532884 MRPS9P82933 396 aaKnown RBP16.6■□□□□ 0.25
PUF60-220ENST00000532884 ARHGAP1Q07960 439 aa16.6■□□□□ 0.25
PUF60-220ENST00000532884 ITGA7Q13683 1181 aa16.6■□□□□ 0.25
PUF60-220ENST00000532884 PFKFB3Q16875 520 aaPredicted RBP16.6■□□□□ 0.25
PUF60-220ENST00000532884 HABP4Q5JVS0 413 aaKnown RBP16.6■□□□□ 0.25
PUF60-220ENST00000532884 DHX37Q8IY37 1157 aaKnown RBP16.6■□□□□ 0.25
PUF60-220ENST00000532884 TRIM43Q96BQ3 446 aaPredicted RBP16.6■□□□□ 0.25
PUF60-220ENST00000532884 PDLIM7Q9NR12 457 aa16.6■□□□□ 0.25
PUF60-220ENST00000532884 TMEM39AQ9NV64 488 aa16.6■□□□□ 0.25
PUF60-220ENST00000532884 POLR3EQ9NVU0 708 aa16.6■□□□□ 0.25
PUF60-220ENST00000532884 BARHL2Q9NY43 387 aa16.6■□□□□ 0.25
PUF60-220ENST00000532884 PCDHA6Q9UN73 950 aa16.6■□□□□ 0.25
PUF60-220ENST00000532884 PCDHA8Q9Y5H6 950 aa16.6■□□□□ 0.25
PUF60-220ENST00000532884 A6NJR5 290 aa16.59■□□□□ 0.25
PUF60-220ENST00000532884 CPLX1O14810 134 aa16.59■□□□□ 0.25
PUF60-220ENST00000532884 PRPF3O43395 683 aaKnown RBP16.59■□□□□ 0.25
PUF60-220ENST00000532884 SLC34A2O95436 690 aa16.59■□□□□ 0.25
PUF60-220ENST00000532884 CDK7P50613 346 aa16.59■□□□□ 0.25
PUF60-220ENST00000532884 PURAQ00577 322 aaKnown RBP16.59■□□□□ 0.25
PUF60-220ENST00000532884 SP2Q02086 613 aa16.59■□□□□ 0.25
PUF60-220ENST00000532884 FAAP100Q0VG06 881 aa16.59■□□□□ 0.25
PUF60-220ENST00000532884 NTRK3Q16288 839 aa16.59■□□□□ 0.25
PUF60-220ENST00000532884 GNPTABQ3T906 1256 aa16.59■□□□□ 0.25
PUF60-220ENST00000532884 ANKRD33Q7Z3H0 272 aa16.59■□□□□ 0.25
PUF60-220ENST00000532884 ZNF274Q96GC6 653 aaPredicted RBP16.59■□□□□ 0.25
PUF60-220ENST00000532884 PGBD1Q96JS3 809 aa16.59■□□□□ 0.25
PUF60-220ENST00000532884 MTG1Q9BT17 334 aaPredicted RBP16.59■□□□□ 0.25
PUF60-220ENST00000532884 UBE2OQ9C0C9 1292 aaKnown RBP16.59■□□□□ 0.25
PUF60-220ENST00000532884 RIC8AQ9NPQ8 531 aa16.59■□□□□ 0.25
PUF60-220ENST00000532884 GRIN2DO15399 1336 aa16.59■□□□□ 0.25
PUF60-220ENST00000532884 RANBP2P49792 3224 aaKnown RBP16.58■□□□□ 0.25
PUF60-220ENST00000532884 DTNBO60941 627 aa16.58■□□□□ 0.24
PUF60-220ENST00000532884 GGPS1O95749 300 aa16.58■□□□□ 0.24
PUF60-220ENST00000532884 IFNAR1P17181 557 aa16.58■□□□□ 0.24
PUF60-220ENST00000532884 LAMC2Q13753 1193 aa16.58■□□□□ 0.24
PUF60-220ENST00000532884 PKN1Q16512 942 aa16.58■□□□□ 0.24
PUF60-220ENST00000532884 C8orf34Q49A92 452 aa16.58■□□□□ 0.24
PUF60-220ENST00000532884 FAM47CQ5HY64 1035 aa16.58■□□□□ 0.24
PUF60-220ENST00000532884 PCNX4Q63HM2 1172 aa16.58■□□□□ 0.24
PUF60-220ENST00000532884 PPP1R18Q6NYC8 613 aa16.58■□□□□ 0.24
PUF60-220ENST00000532884 KCNV1Q6PIU1 500 aa16.58■□□□□ 0.24
PUF60-220ENST00000532884 GDF15Q99988 308 aa16.58■□□□□ 0.24
PUF60-220ENST00000532884 BCAS3Q9H6U6 928 aa16.58■□□□□ 0.24
PUF60-220ENST00000532884 MLXIPQ9HAP2 919 aa16.58■□□□□ 0.24
PUF60-220ENST00000532884 TMEM260Q9NX78 707 aa16.58■□□□□ 0.24
PUF60-220ENST00000532884 FRMPD4Q14CM0 1322 aa16.58■□□□□ 0.24
PUF60-220ENST00000532884 NID2Q14112 1375 aa16.58■□□□□ 0.24
PUF60-220ENST00000532884 MROH7Q68CQ1 1323 aa16.57■□□□□ 0.24
PUF60-220ENST00000532884 hCG_1984214I3L0E3 225 aa16.57■□□□□ 0.24
PUF60-220ENST00000532884 TLR3O15455 904 aaKnown RBP16.57■□□□□ 0.24
PUF60-220ENST00000532884 KPNA6O60684 536 aa16.57■□□□□ 0.24
PUF60-220ENST00000532884 MMP3P08254 477 aa16.57■□□□□ 0.24
PUF60-220ENST00000532884 TGFB3P10600 412 aa16.57■□□□□ 0.24
PUF60-220ENST00000532884 RAG1P15918 1043 aa16.57■□□□□ 0.24
PUF60-220ENST00000532884 UBA1P22314 1058 aaKnown RBP16.57■□□□□ 0.24
PUF60-220ENST00000532884 NEK4P51957 841 aa16.57■□□□□ 0.24
PUF60-220ENST00000532884 AK2P54819 239 aa16.57■□□□□ 0.24
PUF60-220ENST00000532884 SSRP1Q08945 709 aaKnown RBP16.57■□□□□ 0.24
PUF60-220ENST00000532884 CELF3Q5SZQ8 465 aaKnown RBP16.57■□□□□ 0.24
PUF60-220ENST00000532884 TRIM22Q8IYM9 498 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms