RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 HAS1Q92839 578 aa16.57■□□□□ 0.24
SSH3-210ENST00000532881 BCAS3Q9H6U6 928 aa16.57■□□□□ 0.24
SSH3-210ENST00000532881 KRT86O43790 486 aa16.57■□□□□ 0.24
SSH3-210ENST00000532881 STAT3P40763 770 aa16.57■□□□□ 0.24
SSH3-210ENST00000532881 GFPT1Q06210 699 aaPredicted RBP16.57■□□□□ 0.24
SSH3-210ENST00000532881 SKIDA1Q1XH10 827 aa16.57■□□□□ 0.24
SSH3-210ENST00000532881 SLC30A10Q6XR72 485 aa16.57■□□□□ 0.24
SSH3-210ENST00000532881 MYO1AQ9UBC5 1043 aa16.57■□□□□ 0.24
SSH3-210ENST00000532881 BUB1O43683 1085 aa16.56■□□□□ 0.24
SSH3-210ENST00000532881 MYL1P05976 194 aa16.56■□□□□ 0.24
SSH3-210ENST00000532881 ATP2B4P23634 1241 aa16.56■□□□□ 0.24
SSH3-210ENST00000532881 CYLC1P35663 651 aaPredicted RBP16.56■□□□□ 0.24
SSH3-210ENST00000532881 HNRNPLLQ8WVV9 542 aaKnown RBP16.56■□□□□ 0.24
SSH3-210ENST00000532881 CCDC47Q96A33 483 aaKnown RBP16.56■□□□□ 0.24
SSH3-210ENST00000532881 SIK3Q9Y2K2 1263 aa16.56■□□□□ 0.24
SSH3-210ENST00000532881 MYH10P35580 1976 aa16.56■□□□□ 0.24
SSH3-210ENST00000532881 MARCH6O60337 910 aa16.56■□□□□ 0.24
SSH3-210ENST00000532881 KRT83P78385 493 aa16.56■□□□□ 0.24
SSH3-210ENST00000532881 AMPD3Q01432 767 aa16.56■□□□□ 0.24
SSH3-210ENST00000532881 SLC7A5Q01650 507 aa16.56■□□□□ 0.24
SSH3-210ENST00000532881 ARID5AQ03989 594 aa16.56■□□□□ 0.24
SSH3-210ENST00000532881 ZSCAN29Q8IWY8 852 aaPredicted RBP16.56■□□□□ 0.24
SSH3-210ENST00000532881 RAD54LQ92698 747 aa16.56■□□□□ 0.24
SSH3-210ENST00000532881 USP14P54578 494 aa16.55■□□□□ 0.24
SSH3-210ENST00000532881 FAM193AP78312 1265 aa16.55■□□□□ 0.24
SSH3-210ENST00000532881 CRY2Q49AN0 593 aa16.55■□□□□ 0.24
SSH3-210ENST00000532881 NFRKBQ6P4R8 1299 aa16.55■□□□□ 0.24
SSH3-210ENST00000532881 CUEDC2Q9H467 287 aa16.55■□□□□ 0.24
SSH3-210ENST00000532881 ZHX3Q9H4I2 956 aa16.55■□□□□ 0.24
SSH3-210ENST00000532881 USP40Q9NVE5 1235 aa16.55■□□□□ 0.24
SSH3-210ENST00000532881 EIF3CLB5ME19 914 aaKnown RBP16.55■□□□□ 0.24
SSH3-210ENST00000532881 ERLIN1O75477 346 aa16.55■□□□□ 0.24
SSH3-210ENST00000532881 KIF11P52732 1056 aa16.55■□□□□ 0.24
SSH3-210ENST00000532881 PAPD7Q5XG87 772 aaKnown RBP16.55■□□□□ 0.24
SSH3-210ENST00000532881 FOXR1Q6PIV2 292 aa16.55■□□□□ 0.24
SSH3-210ENST00000532881 UNC13DQ70J99 1090 aa16.55■□□□□ 0.24
SSH3-210ENST00000532881 ERGIC2Q96RQ1 377 aa16.55■□□□□ 0.24
SSH3-210ENST00000532881 EIF3CQ99613 913 aaKnown RBP16.55■□□□□ 0.24
SSH3-210ENST00000532881 IFIH1Q9BYX4 1025 aaKnown RBP16.55■□□□□ 0.24
SSH3-210ENST00000532881 DDX25Q9UHL0 483 aaKnown RBP16.55■□□□□ 0.24
SSH3-210ENST00000532881 PCDHA13Q9Y5I0 950 aa16.55■□□□□ 0.24
SSH3-210ENST00000532881 IPO7O95373 1038 aaKnown RBP16.54■□□□□ 0.24
SSH3-210ENST00000532881 GABPAQ06546 454 aa16.54■□□□□ 0.24
SSH3-210ENST00000532881 KCNMA1Q12791 1236 aa16.54■□□□□ 0.24
SSH3-210ENST00000532881 KIF5AQ12840 1032 aa16.54■□□□□ 0.24
SSH3-210ENST00000532881 RBM17Q96I25 401 aaKnown RBP16.54■□□□□ 0.24
SSH3-210ENST00000532881 DEF6Q9H4E7 631 aa16.54■□□□□ 0.24
SSH3-210ENST00000532881 GAKO14976 1311 aa16.54■□□□□ 0.24
SSH3-210ENST00000532881 PTPROQ16827 1216 aa16.54■□□□□ 0.24
SSH3-210ENST00000532881 KRT79Q5XKE5 535 aa16.54■□□□□ 0.24
SSH3-210ENST00000532881 LRRC55Q6ZSA7 311 aa16.54■□□□□ 0.24
SSH3-210ENST00000532881 NOC3LQ8WTT2 800 aaKnown RBP16.54■□□□□ 0.24
SSH3-210ENST00000532881 SECISBP2LQ93073 1101 aaKnown RBP16.54■□□□□ 0.24
SSH3-210ENST00000532881 KIAA1024Q9UPX6 916 aa16.54■□□□□ 0.24
SSH3-210ENST00000532881 POTEB3A0JP26 581 aa16.53■□□□□ 0.24
SSH3-210ENST00000532881 CCDC66A2RUB6 948 aa16.53■□□□□ 0.24
SSH3-210ENST00000532881 POTECB2RU33 542 aa16.53■□□□□ 0.24
SSH3-210ENST00000532881 AKR1B10O60218 316 aa16.53■□□□□ 0.24
SSH3-210ENST00000532881 SHMT1P34896 483 aa16.53■□□□□ 0.24
SSH3-210ENST00000532881 VAV2P52735 878 aa16.53■□□□□ 0.24
SSH3-210ENST00000532881 RASSF7Q02833 373 aa16.53■□□□□ 0.24
SSH3-210ENST00000532881 ZNF543Q08ER8 600 aa16.53■□□□□ 0.24
SSH3-210ENST00000532881 SPA17Q15506 151 aa16.53■□□□□ 0.24
SSH3-210ENST00000532881 POTEBQ6S5H4 581 aa16.53■□□□□ 0.24
SSH3-210ENST00000532881 P2RX7Q99572 595 aaKnown RBP16.53■□□□□ 0.24
SSH3-210ENST00000532881 ZNF219Q9P2Y4 722 aaPredicted RBP16.53■□□□□ 0.24
SSH3-210ENST00000532881 PLAGL2Q9UPG8 496 aa16.53■□□□□ 0.24
SSH3-210ENST00000532881 TRAF5O00463 557 aa16.53■□□□□ 0.24
SSH3-210ENST00000532881 MEIS1O00470 390 aa16.53■□□□□ 0.24
SSH3-210ENST00000532881 FXR2P51116 673 aaKnown RBP eCLIP16.53■□□□□ 0.24
SSH3-210ENST00000532881 COASYQ13057 564 aa16.53■□□□□ 0.24
SSH3-210ENST00000532881 TMEM266Q2M3C6 531 aa16.53■□□□□ 0.24
SSH3-210ENST00000532881 FAM114A1Q8IWE2 563 aa16.53■□□□□ 0.24
SSH3-210ENST00000532881 DNAJC19Q96DA6 116 aa16.53■□□□□ 0.24
SSH3-210ENST00000532881 MS4A14Q96JA4 679 aa16.53■□□□□ 0.24
SSH3-210ENST00000532881 NUP58Q9BVL2 599 aa16.53■□□□□ 0.24
SSH3-210ENST00000532881 SERPINB13Q9UIV8 391 aa16.53■□□□□ 0.24
SSH3-210ENST00000532881 ADAMTSL1Q8N6G6 1762 aa16.52■□□□□ 0.24
SSH3-210ENST00000532881 UBAP1LF5GYI3 381 aa16.52■□□□□ 0.24
SSH3-210ENST00000532881 RNASE9P60153 205 aaKnown RBP16.52■□□□□ 0.24
SSH3-210ENST00000532881 LRRC1Q9BTT6 524 aa16.52■□□□□ 0.24
SSH3-210ENST00000532881 DMGDHQ9UI17 866 aaKnown RBP16.52■□□□□ 0.24
SSH3-210ENST00000532881 PCDHA12Q9UN75 941 aa16.52■□□□□ 0.24
SSH3-210ENST00000532881 TTLL1O95922 423 aa16.52■□□□□ 0.23
SSH3-210ENST00000532881 PLCG2P16885 1265 aa16.52■□□□□ 0.23
SSH3-210ENST00000532881 SLC1A4P43007 532 aa16.52■□□□□ 0.23
SSH3-210ENST00000532881 C15orf52Q6ZUT6 534 aaKnown RBP16.52■□□□□ 0.23
SSH3-210ENST00000532881 CREG2Q8IUH2 290 aa16.52■□□□□ 0.23
SSH3-210ENST00000532881 BAP1Q92560 729 aa16.52■□□□□ 0.23
SSH3-210ENST00000532881 TRIM34Q9BYJ4 488 aa16.52■□□□□ 0.23
SSH3-210ENST00000532881 MAGEF1Q9HAY2 307 aa16.52■□□□□ 0.23
SSH3-210ENST00000532881 LCMT1Q9UIC8 334 aa16.52■□□□□ 0.23
SSH3-210ENST00000532881 PACSIN2Q9UNF0 486 aaPredicted RBP16.52■□□□□ 0.23
SSH3-210ENST00000532881 POTEB2H3BUK9 544 aa16.51■□□□□ 0.23
SSH3-210ENST00000532881 NOVP48745 357 aa16.51■□□□□ 0.23
SSH3-210ENST00000532881 PSMC6P62333 389 aa16.51■□□□□ 0.23
SSH3-210ENST00000532881 TUBB2AQ13885 445 aa16.51■□□□□ 0.23
SSH3-210ENST00000532881 MAN2A1Q16706 1144 aa16.51■□□□□ 0.23
SSH3-210ENST00000532881 TDRD12Q587J7 1177 aaKnown RBP16.51■□□□□ 0.23
SSH3-210ENST00000532881 CDC42EP5Q6NZY7 148 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms