RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 ZNF697Q5TEC3 545 aa21.95■■□□□ 1.1
SSH3-209ENST00000532600 VSIG10LQ86VR7 867 aa21.95■■□□□ 1.1
SSH3-209ENST00000532600 ZFP91Q96JP5 570 aaPredicted RBP21.95■■□□□ 1.1
SSH3-209ENST00000532600 CTAGE1Q96RT6 745 aa21.95■■□□□ 1.1
SSH3-209ENST00000532600 SPZ1Q9BXG8 430 aa21.95■■□□□ 1.1
SSH3-209ENST00000532600 LRRC2Q9BYS8 371 aa21.95■■□□□ 1.1
SSH3-209ENST00000532600 IL23AQ9NPF7 189 aa21.95■■□□□ 1.1
SSH3-209ENST00000532600 GRXCR1A8MXD5 290 aa21.94■■□□□ 1.1
SSH3-209ENST00000532600 PLEKHA8P1O95397 391 aa21.94■■□□□ 1.1
SSH3-209ENST00000532600 GH1P01241 217 aa21.94■■□□□ 1.1
SSH3-209ENST00000532600 RXRAP19793 462 aa21.94■■□□□ 1.1
SSH3-209ENST00000532600 CASC1Q6TDU7 716 aa21.94■■□□□ 1.1
SSH3-209ENST00000532600 SRBD1Q8N5C6 995 aaKnown RBP21.94■■□□□ 1.1
SSH3-209ENST00000532600 SAMD3Q8N6K7 520 aa21.94■■□□□ 1.1
SSH3-209ENST00000532600 GPKOWQ92917 476 aaPredicted RBP eCLIP21.94■■□□□ 1.1
SSH3-209ENST00000532600 CXXC1Q9P0U4 656 aaPredicted RBP21.94■■□□□ 1.1
SSH3-209ENST00000532600 CDH23Q9H251 3354 aa21.94■■□□□ 1.1
SSH3-209ENST00000532600 GCOM1H8Y6P7 765 aaPredicted RBP21.93■■□□□ 1.1
SSH3-209ENST00000532600 KPNA6O60684 536 aa21.93■■□□□ 1.1
SSH3-209ENST00000532600 CDC45O75419 566 aa21.93■■□□□ 1.1
SSH3-209ENST00000532600 POLR2MP0CAP2 368 aa21.93■■□□□ 1.1
SSH3-209ENST00000532600 MYCLP12524 364 aaPredicted RBP21.93■■□□□ 1.1
SSH3-209ENST00000532600 SP2Q02086 613 aa21.93■■□□□ 1.1
SSH3-209ENST00000532600 FRMPD4Q14CM0 1322 aa21.93■■□□□ 1.1
SSH3-209ENST00000532600 BRDTQ58F21 947 aaPredicted RBP21.93■■□□□ 1.1
SSH3-209ENST00000532600 NFRKBQ6P4R8 1299 aa21.93■■□□□ 1.1
SSH3-209ENST00000532600 RAB11FIP4Q86YS3 637 aa21.93■■□□□ 1.1
SSH3-209ENST00000532600 CMTR1Q8N1G2 835 aaKnown RBP21.93■■□□□ 1.1
SSH3-209ENST00000532600 EMID1Q96A84 441 aaPredicted RBP21.93■■□□□ 1.1
SSH3-209ENST00000532600 SCLYQ96I15 445 aa21.93■■□□□ 1.1
SSH3-209ENST00000532600 TMEM87BQ96K49 555 aa21.93■■□□□ 1.1
SSH3-209ENST00000532600 CDX2Q99626 313 aaPredicted RBP21.93■■□□□ 1.1
SSH3-209ENST00000532600 SCN5AQ14524 2016 aa21.92■■□□□ 1.1
SSH3-209ENST00000532600 MYH7BA7E2Y1 1941 aa21.92■■□□□ 1.1
SSH3-209ENST00000532600 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.92■■□□□ 1.1
SSH3-209ENST00000532600 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.92■■□□□ 1.1
SSH3-209ENST00000532600 LIFRP42702 1097 aa21.92■■□□□ 1.1
SSH3-209ENST00000532600 PSRC1Q6PGN9 363 aaPredicted RBP21.92■■□□□ 1.1
SSH3-209ENST00000532600 FCHSD1Q86WN1 690 aa21.92■■□□□ 1.1
SSH3-209ENST00000532600 RASEFQ8IZ41 740 aa21.92■■□□□ 1.1
SSH3-209ENST00000532600 HERVK_113Q902F9 699 aa21.92■■□□□ 1.1
SSH3-209ENST00000532600 MRVI1Q9Y6F6 885 aa21.92■■□□□ 1.1
SSH3-209ENST00000532600 CHD9Q3L8U1 2897 aa21.91■■□□□ 1.1
SSH3-209ENST00000532600 RBAK-RBAKDNI3L0D1 243 aa21.91■■□□□ 1.1
SSH3-209ENST00000532600 SMARCA1P28370 1054 aa21.91■■□□□ 1.1
SSH3-209ENST00000532600 PBX2P40425 430 aa21.91■■□□□ 1.1
SSH3-209ENST00000532600 FAM47CQ5HY64 1035 aa21.91■■□□□ 1.1
SSH3-209ENST00000532600 CTCFLQ8NI51 663 aaPredicted RBP21.91■■□□□ 1.1
SSH3-209ENST00000532600 BCAS3Q9H6U6 928 aa21.91■■□□□ 1.1
SSH3-209ENST00000532600 SUPT20HL2P0C7V6 817 aa21.9■■□□□ 1.1
SSH3-209ENST00000532600 HOXD8P13378 290 aaPredicted RBP21.9■■□□□ 1.1
SSH3-209ENST00000532600 DNAJB2P25686 324 aa21.9■■□□□ 1.1
SSH3-209ENST00000532600 MRPS9P82933 396 aaKnown RBP21.9■■□□□ 1.1
SSH3-209ENST00000532600 TRAF1Q13077 416 aa21.9■■□□□ 1.1
SSH3-209ENST00000532600 ADCK5Q3MIX3 580 aa21.9■■□□□ 1.1
SSH3-209ENST00000532600 NFXL1Q6ZNB6 911 aa21.9■■□□□ 1.1
SSH3-209ENST00000532600 TANC1Q9C0D5 1861 aa21.9■■□□□ 1.1
SSH3-209ENST00000532600 CCDC69A6NI79 296 aa21.89■■□□□ 1.09
SSH3-209ENST00000532600 SORBS3O60504 671 aa21.89■■□□□ 1.09
SSH3-209ENST00000532600 UBA1P22314 1058 aaKnown RBP21.89■■□□□ 1.09
SSH3-209ENST00000532600 KIF5BP33176 963 aa21.89■■□□□ 1.09
SSH3-209ENST00000532600 EXOSC10Q01780 885 aaKnown RBP21.89■■□□□ 1.09
SSH3-209ENST00000532600 PTPN11Q06124 597 aaPredicted RBP21.89■■□□□ 1.09
SSH3-209ENST00000532600 MYSM1Q5VVJ2 828 aa21.89■■□□□ 1.09
SSH3-209ENST00000532600 GDF6Q6KF10 455 aaPredicted RBP21.89■■□□□ 1.09
SSH3-209ENST00000532600 USP17L6PQ6QN14 398 aa21.89■■□□□ 1.09
SSH3-209ENST00000532600 SGMS1Q86VZ5 419 aa21.89■■□□□ 1.09
SSH3-209ENST00000532600 TMTC2Q8N394 836 aa21.89■■□□□ 1.09
SSH3-209ENST00000532600 PPTC7Q8NI37 304 aa21.89■■□□□ 1.09
SSH3-209ENST00000532600 RRP36Q96EU6 259 aaKnown RBP21.89■■□□□ 1.09
SSH3-209ENST00000532600 TCEANC2Q96MN5 208 aa21.89■■□□□ 1.09
SSH3-209ENST00000532600 PBX4Q9BYU1 374 aa21.89■■□□□ 1.09
SSH3-209ENST00000532600 GBF1Q92538 1859 aa21.89■■□□□ 1.09
SSH3-209ENST00000532600 hCG_1642624A0A1W2PR95 340 aa21.88■■□□□ 1.09
SSH3-209ENST00000532600 MEIS2O14770 477 aa21.88■■□□□ 1.09
SSH3-209ENST00000532600 FGBP02675 491 aa21.88■■□□□ 1.09
SSH3-209ENST00000532600 ZNF286BP0CG31 522 aa21.88■■□□□ 1.09
SSH3-209ENST00000532600 CCND2P30279 289 aa21.88■■□□□ 1.09
SSH3-209ENST00000532600 CHMP4BP1P59074 171 aa21.88■■□□□ 1.09
SSH3-209ENST00000532600 SEMA3FQ13275 785 aa21.88■■□□□ 1.09
SSH3-209ENST00000532600 LAMC2Q13753 1193 aa21.88■■□□□ 1.09
SSH3-209ENST00000532600 DGKDQ16760 1214 aa21.88■■□□□ 1.09
SSH3-209ENST00000532600 HSDL1Q3SXM5 330 aa21.88■■□□□ 1.09
SSH3-209ENST00000532600 CELF3Q5SZQ8 465 aaKnown RBP21.88■■□□□ 1.09
SSH3-209ENST00000532600 OTOP2Q7RTS6 562 aa21.88■■□□□ 1.09
SSH3-209ENST00000532600 SESTD1Q86VW0 696 aa21.88■■□□□ 1.09
SSH3-209ENST00000532600 SLC17A8Q8NDX2 589 aa21.88■■□□□ 1.09
SSH3-209ENST00000532600 MYLIPQ8WY64 445 aa21.88■■□□□ 1.09
SSH3-209ENST00000532600 LZTS2Q9BRK4 669 aa21.88■■□□□ 1.09
SSH3-209ENST00000532600 TMEM265A0A087WTH1 108 aa21.87■■□□□ 1.09
SSH3-209ENST00000532600 HAS3O00219 553 aa21.87■■□□□ 1.09
SSH3-209ENST00000532600 GGPS1O95749 300 aa21.87■■□□□ 1.09
SSH3-209ENST00000532600 F2P00734 622 aa21.87■■□□□ 1.09
SSH3-209ENST00000532600 CASTP20810 708 aaKnown RBP21.87■■□□□ 1.09
SSH3-209ENST00000532600 GRIN2CQ14957 1233 aa21.87■■□□□ 1.09
SSH3-209ENST00000532600 TSGA10IPQ3SY00 556 aa21.87■■□□□ 1.09
SSH3-209ENST00000532600 TMTC3Q6ZXV5 915 aa21.87■■□□□ 1.09
SSH3-209ENST00000532600 DHX37Q8IY37 1157 aaKnown RBP21.87■■□□□ 1.09
SSH3-209ENST00000532600 FANCBQ8NB91 859 aa21.87■■□□□ 1.09
SSH3-209ENST00000532600 DHX38Q92620 1227 aaKnown RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms