RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 FDPSP14324 419 aaKnown RBP16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 CD19P15391 556 aa16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 TMEM179Q6ZVK1 233 aa16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 CCDC127Q96BQ5 260 aa16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 MASTLQ96GX5 879 aa16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 TSNARE1Q96NA8 513 aa16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 H0YCG3 227 aa16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 MEIS1O00470 390 aa16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 CTDNEP1O95476 244 aa16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 FAM186BQ8IYM0 893 aa16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 NACC1Q96RE7 527 aa16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 BARHL2Q9NY43 387 aa16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 BCS1LQ9Y276 419 aa16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 USTQ9Y2C2 406 aa16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 ATP2C1P98194 919 aaPredicted RBP16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 KRT71Q3SY84 523 aa16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 IVNS1ABPQ9Y6Y0 642 aa16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 CCDC151A5D8V7 595 aa16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 FERP16591 822 aa16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 PSMC2P35998 433 aaKnown RBP16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 GUCY2FP51841 1108 aa16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 PTPROQ16827 1216 aa16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 UNC13DQ70J99 1090 aa16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 MAIP1Q8WWC4 291 aa16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 GLG1Q92896 1179 aa16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 MED4Q9NPJ6 270 aa16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 FEZ2Q9UHY8 353 aaPredicted RBP16.79■□□□□ 0.28
PCDHA3-202ENST00000532566 FOXN1O15353 648 aa16.78■□□□□ 0.28
PCDHA3-202ENST00000532566 LIG4P49917 911 aa16.78■□□□□ 0.28
PCDHA3-202ENST00000532566 NFIXQ14938 502 aa16.78■□□□□ 0.28
PCDHA3-202ENST00000532566 C12orf60Q5U649 245 aa16.78■□□□□ 0.28
PCDHA3-202ENST00000532566 NEDD1Q8NHV4 660 aa16.78■□□□□ 0.28
PCDHA3-202ENST00000532566 FBXO2Q9UK22 296 aaPredicted RBP16.78■□□□□ 0.28
PCDHA3-202ENST00000532566 ZBTB5O15062 677 aa16.78■□□□□ 0.28
PCDHA3-202ENST00000532566 GAS8O95995 478 aa16.78■□□□□ 0.28
PCDHA3-202ENST00000532566 METTL16Q86W50 562 aaKnown RBP16.78■□□□□ 0.28
PCDHA3-202ENST00000532566 NHEJ1Q9H9Q4 299 aaPredicted RBP16.78■□□□□ 0.28
PCDHA3-202ENST00000532566 EPB41L4AQ9HCS5 686 aaPredicted RBP16.78■□□□□ 0.28
PCDHA3-202ENST00000532566 A0A0G2JLW4 131 aa16.78■□□□□ 0.28
PCDHA3-202ENST00000532566 FAM170AA1A519 330 aa16.78■□□□□ 0.28
PCDHA3-202ENST00000532566 VIMP08670 466 aaKnown RBP16.78■□□□□ 0.28
PCDHA3-202ENST00000532566 C1orf112Q9NSG2 853 aa16.78■□□□□ 0.28
PCDHA3-202ENST00000532566 LGALS16A8MUM7 142 aa16.77■□□□□ 0.28
PCDHA3-202ENST00000532566 EIF4A3P38919 411 aaKnown RBP16.77■□□□□ 0.28
PCDHA3-202ENST00000532566 PRCPP42785 496 aa16.77■□□□□ 0.28
PCDHA3-202ENST00000532566 CYP27A1Q02318 531 aa16.77■□□□□ 0.28
PCDHA3-202ENST00000532566 ZBTB16Q05516 673 aa16.77■□□□□ 0.28
PCDHA3-202ENST00000532566 DMP1Q13316 513 aaPredicted RBP16.77■□□□□ 0.28
PCDHA3-202ENST00000532566 MEGF6O75095 1541 aa16.77■□□□□ 0.28
PCDHA3-202ENST00000532566 NTSR2O95665 410 aa16.77■□□□□ 0.28
PCDHA3-202ENST00000532566 AP3B2Q13367 1082 aa16.77■□□□□ 0.28
PCDHA3-202ENST00000532566 SRBD1Q8N5C6 995 aaKnown RBP16.77■□□□□ 0.28
PCDHA3-202ENST00000532566 FBF1Q8TES7 1133 aa16.77■□□□□ 0.28
PCDHA3-202ENST00000532566 GINS2Q9Y248 185 aa16.77■□□□□ 0.28
PCDHA3-202ENST00000532566 CSADQ9Y600 493 aa16.77■□□□□ 0.28
PCDHA3-202ENST00000532566 SLIT1O75093 1534 aa16.77■□□□□ 0.28
PCDHA3-202ENST00000532566 RAD17O75943 681 aa16.77■□□□□ 0.27
PCDHA3-202ENST00000532566 ORC2Q13416 577 aaPredicted RBP16.77■□□□□ 0.27
PCDHA3-202ENST00000532566 PODNQ7Z5L7 613 aa16.77■□□□□ 0.27
PCDHA3-202ENST00000532566 CRKP46108 304 aa16.77■□□□□ 0.27
PCDHA3-202ENST00000532566 C6orf163Q5TEZ5 329 aa16.77■□□□□ 0.27
PCDHA3-202ENST00000532566 PARP2Q9UGN5 583 aa16.77■□□□□ 0.27
PCDHA3-202ENST00000532566 TRIM49BA6NDI0 452 aa16.76■□□□□ 0.27
PCDHA3-202ENST00000532566 POTEMA6NI47 508 aa16.76■□□□□ 0.27
PCDHA3-202ENST00000532566 SEC31AO94979 1220 aaKnown RBP16.76■□□□□ 0.27
PCDHA3-202ENST00000532566 CACNB3P54284 484 aa16.76■□□□□ 0.27
PCDHA3-202ENST00000532566 MYL7Q01449 175 aa16.76■□□□□ 0.27
PCDHA3-202ENST00000532566 MARCH10Q8NA82 808 aaPredicted RBP16.76■□□□□ 0.27
PCDHA3-202ENST00000532566 CLIC2O15247 247 aa16.76■□□□□ 0.27
PCDHA3-202ENST00000532566 DLATP10515 647 aaKnown RBP16.76■□□□□ 0.27
PCDHA3-202ENST00000532566 LMNB1P20700 586 aa16.76■□□□□ 0.27
PCDHA3-202ENST00000532566 AOC3Q16853 763 aa16.76■□□□□ 0.27
PCDHA3-202ENST00000532566 SREK1Q8WXA9 508 aaKnown RBP16.76■□□□□ 0.27
PCDHA3-202ENST00000532566 RABEP2Q9H5N1 569 aa16.76■□□□□ 0.27
PCDHA3-202ENST00000532566 PDE11AQ9HCR9 933 aa16.76■□□□□ 0.27
PCDHA3-202ENST00000532566 MKRN1Q9UHC7 482 aaKnown RBP16.76■□□□□ 0.27
PCDHA3-202ENST00000532566 JRKLQ9Y4A0 524 aa16.76■□□□□ 0.27
PCDHA3-202ENST00000532566 TXNRD1Q16881 649 aa16.76■□□□□ 0.27
PCDHA3-202ENST00000532566 DCAF4Q8WV16 495 aa16.76■□□□□ 0.27
PCDHA3-202ENST00000532566 RASSF4Q9H2L5 321 aa16.76■□□□□ 0.27
PCDHA3-202ENST00000532566 GH2P01242 217 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 CTNNA1P35221 906 aaKnown RBP16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 PPP4R3CPQ6ZMV5 832 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 ANKRD35Q8N283 1001 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 FAM71BQ8TC56 605 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 PVALEFA0A1B0GWK0 134 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 ECM2O94769 699 aaPredicted RBP16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 PDE6CP51160 858 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 KIF11P52732 1056 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 CCDC93Q567U6 631 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 BHMT2Q9H2M3 363 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 PARVGQ9HBI0 331 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 PXDNQ92626 1479 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 KRT19P08727 400 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 GPSM2P81274 684 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 ZSCAN26Q16670 478 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 SBK1Q52WX2 424 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 RC3H1Q5TC82 1133 aaKnown RBP16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 STAG2Q8N3U4 1231 aa16.75■□□□□ 0.27
PCDHA3-202ENST00000532566 PARD6BQ9BYG5 372 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms