RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 CUL5Q93034 780 aa19.9■□□□□ 0.78
PHRF1-204ENST00000532550 PPP1R12CQ9BZL4 782 aa19.9■□□□□ 0.78
PHRF1-204ENST00000532550 DDX41Q9UJV9 622 aaKnown RBP19.9■□□□□ 0.78
PHRF1-204ENST00000532550 MRVI1Q9Y6F6 885 aa19.9■□□□□ 0.78
PHRF1-204ENST00000532550 CCND2P30279 289 aa19.89■□□□□ 0.77
PHRF1-204ENST00000532550 FGD1P98174 961 aa19.89■□□□□ 0.77
PHRF1-204ENST00000532550 MICU3Q86XE3 530 aa19.89■□□□□ 0.77
PHRF1-204ENST00000532550 AFG1LQ8WV93 481 aa19.89■□□□□ 0.77
PHRF1-204ENST00000532550 TRPV6Q9H1D0 765 aa19.89■□□□□ 0.77
PHRF1-204ENST00000532550 SUPT20HL2P0C7V6 817 aa19.88■□□□□ 0.77
PHRF1-204ENST00000532550 CASTP20810 708 aaKnown RBP19.88■□□□□ 0.77
PHRF1-204ENST00000532550 PPIGQ13427 754 aaKnown RBP eCLIP19.88■□□□□ 0.773e-7■■□□□ 13.8
PHRF1-204ENST00000532550 LAMC2Q13753 1193 aa19.88■□□□□ 0.77
PHRF1-204ENST00000532550 NBPF20Q3BBV1 942 aa19.88■□□□□ 0.77
PHRF1-204ENST00000532550 SMARCC2Q8TAQ2 1214 aa19.88■□□□□ 0.77
PHRF1-204ENST00000532550 TCEANC2Q96MN5 208 aa19.88■□□□□ 0.77
PHRF1-204ENST00000532550 ALDH8A1Q9H2A2 487 aaPredicted RBP19.88■□□□□ 0.77
PHRF1-204ENST00000532550 MYH7BA7E2Y1 1941 aa19.87■□□□□ 0.77
PHRF1-204ENST00000532550 B4GALT4O60513 344 aa19.87■□□□□ 0.77
PHRF1-204ENST00000532550 REC8O95072 547 aa19.87■□□□□ 0.77
PHRF1-204ENST00000532550 EPHB4P54760 987 aa19.87■□□□□ 0.77
PHRF1-204ENST00000532550 ARHGAP1Q07960 439 aa19.87■□□□□ 0.77
PHRF1-204ENST00000532550 FAM47CQ5HY64 1035 aa19.87■□□□□ 0.77
PHRF1-204ENST00000532550 APOA5Q6Q788 366 aa19.87■□□□□ 0.77
PHRF1-204ENST00000532550 TMTC3Q6ZXV5 915 aa19.87■□□□□ 0.77
PHRF1-204ENST00000532550 DHX37Q8IY37 1157 aaKnown RBP19.87■□□□□ 0.77
PHRF1-204ENST00000532550 HIPK3Q9H422 1215 aa19.87■□□□□ 0.77
PHRF1-204ENST00000532550 RBM28Q9NW13 759 aaKnown RBP19.87■□□□□ 0.77
PHRF1-204ENST00000532550 PPP4R2Q9NY27 417 aa19.87■□□□□ 0.77
PHRF1-204ENST00000532550 ZBTB43O43298 467 aa19.86■□□□□ 0.77
PHRF1-204ENST00000532550 RGS20O76081 388 aa19.86■□□□□ 0.77
PHRF1-204ENST00000532550 MMP3P08254 477 aa19.86■□□□□ 0.77
PHRF1-204ENST00000532550 TGFB3P10600 412 aa19.86■□□□□ 0.77
PHRF1-204ENST00000532550 CYP2C18P33260 490 aa19.86■□□□□ 0.77
PHRF1-204ENST00000532550 HSPA4P34932 840 aa19.86■□□□□ 0.77
PHRF1-204ENST00000532550 CHMP4BP1P59074 171 aa19.86■□□□□ 0.77
PHRF1-204ENST00000532550 DGKDQ16760 1214 aa19.86■□□□□ 0.77
PHRF1-204ENST00000532550 ERICH6BQ5W0A0 696 aa19.86■□□□□ 0.77
PHRF1-204ENST00000532550 NFRKBQ6P4R8 1299 aa19.86■□□□□ 0.77
PHRF1-204ENST00000532550 USP17L6PQ6QN14 398 aa19.86■□□□□ 0.77
PHRF1-204ENST00000532550 DEFB123Q8N688 67 aa19.86■□□□□ 0.77
PHRF1-204ENST00000532550 IL31RAQ8NI17 732 aa19.86■□□□□ 0.77
PHRF1-204ENST00000532550 KCNB2Q92953 911 aa19.86■□□□□ 0.77
PHRF1-204ENST00000532550 ZFP91Q96JP5 570 aaPredicted RBP19.86■□□□□ 0.77
PHRF1-204ENST00000532550 RNPC3Q96LT9 517 aaKnown RBP19.86■□□□□ 0.77
PHRF1-204ENST00000532550 PSTPIP2Q9H939 334 aa19.86■□□□□ 0.77
PHRF1-204ENST00000532550 BRPF3Q9ULD4 1205 aa19.86■□□□□ 0.77
PHRF1-204ENST00000532550 hCG_1642624A0A1W2PR95 340 aa19.85■□□□□ 0.77
PHRF1-204ENST00000532550 PIK3CDO00329 1044 aa19.85■□□□□ 0.77
PHRF1-204ENST00000532550 CSF2RAP15509 400 aa19.85■□□□□ 0.77
PHRF1-204ENST00000532550 PTPN11Q06124 597 aaPredicted RBP19.85■□□□□ 0.77
PHRF1-204ENST00000532550 RTN1Q16799 776 aa19.85■□□□□ 0.77
PHRF1-204ENST00000532550 EMID1Q96A84 441 aaPredicted RBP19.85■□□□□ 0.77
PHRF1-204ENST00000532550 JAKMIP1Q96N16 626 aaKnown RBP19.85■□□□□ 0.77
PHRF1-204ENST00000532550 TRMT13Q9NUP7 481 aaKnown RBP19.85■□□□□ 0.77
PHRF1-204ENST00000532550 NAP1L2Q9ULW6 460 aaPredicted RBP19.85■□□□□ 0.77
PHRF1-204ENST00000532550 KLF18A0A0U1RQI7 1052 aa19.84■□□□□ 0.77
PHRF1-204ENST00000532550 MEIS2O14770 477 aa19.84■□□□□ 0.77
PHRF1-204ENST00000532550 STAM2O75886 525 aa19.84■□□□□ 0.77
PHRF1-204ENST00000532550 GNPTABQ3T906 1256 aa19.84■□□□□ 0.77
PHRF1-204ENST00000532550 BLOC1S2Q6QNY1 142 aa19.84■□□□□ 0.77
PHRF1-204ENST00000532550 NOC4LQ9BVI4 516 aaKnown RBP19.84■□□□□ 0.77
PHRF1-204ENST00000532550 SNX14Q9Y5W7 946 aa19.84■□□□□ 0.77
PHRF1-204ENST00000532550 SCN10AQ9Y5Y9 1956 aa19.84■□□□□ 0.77
PHRF1-204ENST00000532550 PSMA5P28066 241 aa19.83■□□□□ 0.77
PHRF1-204ENST00000532550 CCL23P55773 120 aa19.83■□□□□ 0.77
PHRF1-204ENST00000532550 CELF3Q5SZQ8 465 aaKnown RBP19.83■□□□□ 0.77
PHRF1-204ENST00000532550 MYSM1Q5VVJ2 828 aa19.83■□□□□ 0.77
PHRF1-204ENST00000532550 Q6ZUG5 572 aa19.83■□□□□ 0.77
PHRF1-204ENST00000532550 Q7L0L9 218 aa19.83■□□□□ 0.77
PHRF1-204ENST00000532550 HEATR3Q7Z4Q2 680 aa19.83■□□□□ 0.77
PHRF1-204ENST00000532550 PPTC7Q8NI37 304 aa19.83■□□□□ 0.77
PHRF1-204ENST00000532550 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.83■□□□□ 0.771e-7■■□□□ 14.4
PHRF1-204ENST00000532550 MLXIPQ9HAP2 919 aa19.83■□□□□ 0.77
PHRF1-204ENST00000532550 RTEL1Q9NZ71 1219 aa19.83■□□□□ 0.77
PHRF1-204ENST00000532550 GOLGA8AA7E2F4 631 aa19.82■□□□□ 0.76
PHRF1-204ENST00000532550 GOLGA8BA8MQT2 603 aa19.82■□□□□ 0.76
PHRF1-204ENST00000532550 PPFIA4O75335 1185 aa19.82■□□□□ 0.76
PHRF1-204ENST00000532550 GGPS1O95749 300 aa19.82■□□□□ 0.76
PHRF1-204ENST00000532550 CENPBP07199 599 aaPredicted RBP19.82■□□□□ 0.76
PHRF1-204ENST00000532550 ACRP10323 421 aa19.82■□□□□ 0.76
PHRF1-204ENST00000532550 CYP2C9P11712 490 aa19.82■□□□□ 0.76
PHRF1-204ENST00000532550 CPA1P15085 419 aa19.82■□□□□ 0.76
PHRF1-204ENST00000532550 MRPS9P82933 396 aaKnown RBP19.82■□□□□ 0.76
PHRF1-204ENST00000532550 SMAD3P84022 425 aaKnown RBP19.82■□□□□ 0.76
PHRF1-204ENST00000532550 SP2Q02086 613 aa19.82■□□□□ 0.76
PHRF1-204ENST00000532550 TMEM240Q5SV17 173 aa19.82■□□□□ 0.76
PHRF1-204ENST00000532550 FAM109BQ6ICB4 259 aaPredicted RBP19.82■□□□□ 0.76
PHRF1-204ENST00000532550 XRRA1Q6P2D8 792 aa19.82■□□□□ 0.76
PHRF1-204ENST00000532550 C16orf59Q7L2K0 433 aa19.82■□□□□ 0.76
PHRF1-204ENST00000532550 PPP1R13LQ8WUF5 828 aa19.82■□□□□ 0.76
PHRF1-204ENST00000532550 SPATA33Q96N06 139 aa19.82■□□□□ 0.76
PHRF1-204ENST00000532550 IL23AQ9NPF7 189 aa19.82■□□□□ 0.76
PHRF1-204ENST00000532550 NOD1Q9Y239 953 aa19.82■□□□□ 0.76
PHRF1-204ENST00000532550 V9GY48 417 aaPredicted RBP19.82■□□□□ 0.76
PHRF1-204ENST00000532550 FRMPD4Q14CM0 1322 aa19.81■□□□□ 0.76
PHRF1-204ENST00000532550 UMODL1Q5DID0 1318 aa19.81■□□□□ 0.76
PHRF1-204ENST00000532550 EPB41L2O43491 1005 aaKnown RBP19.81■□□□□ 0.76
PHRF1-204ENST00000532550 SORBS3O60504 671 aa19.81■□□□□ 0.76
PHRF1-204ENST00000532550 RCAN1P53805 252 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms