RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 GRXCR2A6NFK2 248 aa10.58□□□□□ -0.72
USF1-210ENST00000531842 BAIAP3O94812 1187 aa10.58□□□□□ -0.72
USF1-210ENST00000531842 GNAT2P19087 354 aa10.58□□□□□ -0.72
USF1-210ENST00000531842 TRIM71Q2Q1W2 868 aaKnown RBP10.58□□□□□ -0.72
USF1-210ENST00000531842 ZMYM1Q5SVZ6 1142 aa10.58□□□□□ -0.72
USF1-210ENST00000531842 CCDC62Q6P9F0 684 aa10.58□□□□□ -0.72
USF1-210ENST00000531842 CNKSR3Q6P9H4 555 aa10.58□□□□□ -0.72
USF1-210ENST00000531842 SCFD2Q8WU76 684 aa10.58□□□□□ -0.72
USF1-210ENST00000531842 TAAR1Q96RJ0 339 aa10.58□□□□□ -0.72
USF1-210ENST00000531842 CRBNQ96SW2 442 aa10.58□□□□□ -0.72
USF1-210ENST00000531842 RAD9AQ99638 391 aa10.58□□□□□ -0.72
USF1-210ENST00000531842 TOMM22Q9NS69 142 aa10.58□□□□□ -0.72
USF1-210ENST00000531842 CFAP54Q96N23 3096 aa10.58□□□□□ -0.72
USF1-210ENST00000531842 KIAA1671Q9BY89 1806 aa10.58□□□□□ -0.72
USF1-210ENST00000531842 LGR5O75473 907 aa10.57□□□□□ -0.72
USF1-210ENST00000531842 CXCL10P02778 98 aa10.57□□□□□ -0.72
USF1-210ENST00000531842 BTNL9Q6UXG8 535 aa10.57□□□□□ -0.72
USF1-210ENST00000531842 HFE2Q6ZVN8 426 aa10.57□□□□□ -0.72
USF1-210ENST00000531842 MYOCDQ8IZQ8 938 aa10.57□□□□□ -0.72
USF1-210ENST00000531842 FBXO22Q8NEZ5 403 aa10.57□□□□□ -0.72
USF1-210ENST00000531842 PI4K2BQ8TCG2 481 aa10.57□□□□□ -0.72
USF1-210ENST00000531842 AFAP1L1Q8TED9 768 aa10.57□□□□□ -0.72
USF1-210ENST00000531842 DCAF4Q8WV16 495 aa10.57□□□□□ -0.72
USF1-210ENST00000531842 FSD1Q9BTV5 496 aa10.57□□□□□ -0.72
USF1-210ENST00000531842 NACAP1Q9BZK3 213 aa10.57□□□□□ -0.72
USF1-210ENST00000531842 UBA5Q9GZZ9 404 aa10.57□□□□□ -0.72
USF1-210ENST00000531842 BAZ2BQ9UIF8 2168 aaKnown RBP10.57□□□□□ -0.72
USF1-210ENST00000531842 RALGAPA2Q2PPJ7 1873 aa10.57□□□□□ -0.72
USF1-210ENST00000531842 SPTBN4Q9H254 2564 aa10.57□□□□□ -0.72
USF1-210ENST00000531842 LOXHD1Q8IVV2 1947 aa10.56□□□□□ -0.72
USF1-210ENST00000531842 UPP2O95045 317 aa10.56□□□□□ -0.72
USF1-210ENST00000531842 ZFYP08048 801 aaPredicted RBP10.56□□□□□ -0.72
USF1-210ENST00000531842 SLC3A2P08195 630 aaKnown RBP10.56□□□□□ -0.72
USF1-210ENST00000531842 PDHBP11177 359 aa10.56□□□□□ -0.72
USF1-210ENST00000531842 GTF2F1P35269 517 aaKnown RBP eCLIP10.56□□□□□ -0.72
USF1-210ENST00000531842 NOVP48745 357 aa10.56□□□□□ -0.72
USF1-210ENST00000531842 PSEN2P49810 448 aa10.56□□□□□ -0.72
USF1-210ENST00000531842 HAND2P61296 217 aa10.56□□□□□ -0.72
USF1-210ENST00000531842 PTPN11Q06124 597 aaPredicted RBP10.56□□□□□ -0.72
USF1-210ENST00000531842 DLX2Q07687 328 aaPredicted RBP10.56□□□□□ -0.72
USF1-210ENST00000531842 CSPP1Q1MSJ5 1256 aa10.56□□□□□ -0.72
USF1-210ENST00000531842 TCEAL5Q5H9L2 206 aa10.56□□□□□ -0.72
USF1-210ENST00000531842 DBF4BQ8NFT6 615 aa10.56□□□□□ -0.72
USF1-210ENST00000531842 CAGE1Q8TC20 777 aa10.56□□□□□ -0.72
USF1-210ENST00000531842 NEK9Q8TD19 979 aa10.56□□□□□ -0.72
USF1-210ENST00000531842 ZKSCAN3Q9BRR0 538 aa10.56□□□□□ -0.72
USF1-210ENST00000531842 CHMP4BQ9H444 224 aaKnown RBP10.56□□□□□ -0.72
USF1-210ENST00000531842 BCAS3Q9H6U6 928 aa10.56□□□□□ -0.72
USF1-210ENST00000531842 GTF2IRD1Q9UHL9 959 aa10.56□□□□□ -0.72
USF1-210ENST00000531842 ZDBF2Q9HCK1 2354 aa10.56□□□□□ -0.72
USF1-210ENST00000531842 RAD50Q92878 1312 aa10.56□□□□□ -0.72
USF1-210ENST00000531842 KMT2EQ8IZD2 1858 aa10.55□□□□□ -0.72
USF1-210ENST00000531842 NKRFO15226 690 aaKnown RBP eCLIP10.55□□□□□ -0.72
USF1-210ENST00000531842 GH1P01241 217 aa10.55□□□□□ -0.72
USF1-210ENST00000531842 ZNF543Q08ER8 600 aa10.55□□□□□ -0.72
USF1-210ENST00000531842 MKRN4PQ13434 485 aaPredicted RBP10.55□□□□□ -0.72
USF1-210ENST00000531842 MFSD10Q14728 455 aa10.55□□□□□ -0.72
USF1-210ENST00000531842 KIAA0753Q2KHM9 967 aa10.55□□□□□ -0.72
USF1-210ENST00000531842 LRRFIP1Q32MZ4 808 aaKnown RBP10.55□□□□□ -0.72
USF1-210ENST00000531842 EPC2Q52LR7 807 aa10.55□□□□□ -0.72
USF1-210ENST00000531842 BRDTQ58F21 947 aaPredicted RBP10.55□□□□□ -0.72
USF1-210ENST00000531842 C7orf31Q8N865 590 aa10.55□□□□□ -0.72
USF1-210ENST00000531842 GPKOWQ92917 476 aaPredicted RBP eCLIP10.55□□□□□ -0.72
USF1-210ENST00000531842 LMCD1Q9NZU5 365 aa10.55□□□□□ -0.72
USF1-210ENST00000531842 TELO2Q9Y4R8 837 aa10.55□□□□□ -0.72
USF1-210ENST00000531842 SUPT16HQ9Y5B9 1047 aaKnown RBP10.55□□□□□ -0.72
USF1-210ENST00000531842 ZFHX2Q9C0A1 2572 aaPredicted RBP10.55□□□□□ -0.72
USF1-210ENST00000531842 MYO15AQ9UKN7 3530 aa10.54□□□□□ -0.72
USF1-210ENST00000531842 ABHD14A-ACY1A0A1B0GW23 586 aa10.54□□□□□ -0.72
USF1-210ENST00000531842 POTEB3A0JP26 581 aa10.54□□□□□ -0.72
USF1-210ENST00000531842 LINC01565O15544 149 aa10.54□□□□□ -0.72
USF1-210ENST00000531842 DCXO43602 365 aa10.54□□□□□ -0.72
USF1-210ENST00000531842 KPNA6O60684 536 aa10.54□□□□□ -0.72
USF1-210ENST00000531842 CTSHP09668 335 aa10.54□□□□□ -0.72
USF1-210ENST00000531842 TOP1P11387 765 aaKnown RBP10.54□□□□□ -0.72
USF1-210ENST00000531842 EIF2AK2P19525 551 aaKnown RBP10.54□□□□□ -0.72
USF1-210ENST00000531842 IRS1P35568 1242 aa10.54□□□□□ -0.72
USF1-210ENST00000531842 LTBRP36941 435 aa10.54□□□□□ -0.72
USF1-210ENST00000531842 ZP2Q05996 745 aa10.54□□□□□ -0.72
USF1-210ENST00000531842 GPM6BQ13491 265 aa10.54□□□□□ -0.72
USF1-210ENST00000531842 IKBKEQ14164 716 aa10.54□□□□□ -0.72
USF1-210ENST00000531842 IER5LQ5T953 404 aa10.54□□□□□ -0.72
USF1-210ENST00000531842 POTEBQ6S5H4 581 aa10.54□□□□□ -0.72
USF1-210ENST00000531842 CCDC155Q8N6L0 562 aa10.54□□□□□ -0.72
USF1-210ENST00000531842 SYTL5Q8TDW5 730 aaPredicted RBP10.54□□□□□ -0.72
USF1-210ENST00000531842 KAT6AQ92794 2004 aa10.54□□□□□ -0.72
USF1-210ENST00000531842 MRPL38Q96DV4 380 aaKnown RBP10.54□□□□□ -0.72
USF1-210ENST00000531842 FAM227BQ96M60 508 aa10.54□□□□□ -0.72
USF1-210ENST00000531842 DCTPP1Q9H773 170 aa10.54□□□□□ -0.72
USF1-210ENST00000531842 CLDND1Q9NY35 253 aa10.54□□□□□ -0.72
USF1-210ENST00000531842 MUTYHQ9UIF7 546 aa10.54□□□□□ -0.72
USF1-210ENST00000531842 A0A0D9SFI3 127 aa10.53□□□□□ -0.72
USF1-210ENST00000531842 ORC4O43929 436 aa10.53□□□□□ -0.72
USF1-210ENST00000531842 CASTP20810 708 aaKnown RBP10.53□□□□□ -0.72
USF1-210ENST00000531842 THPOP40225 353 aa10.53□□□□□ -0.72
USF1-210ENST00000531842 HTRA4P83105 476 aaPredicted RBP10.53□□□□□ -0.72
USF1-210ENST00000531842 RBL2Q08999 1139 aa10.53□□□□□ -0.72
USF1-210ENST00000531842 ZNF589Q86UQ0 364 aaPredicted RBP10.53□□□□□ -0.72
USF1-210ENST00000531842 SESTD1Q86VW0 696 aa10.53□□□□□ -0.72
USF1-210ENST00000531842 TBC1D10CQ8IV04 446 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms