RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.83□□□□□ -0.687e-16■■■□□ 19.1
NEDD8-206ENST00000531430 MYOCDQ8IZQ8 938 aa10.83□□□□□ -0.68
NEDD8-206ENST00000531430 FBXO22Q8NEZ5 403 aa10.83□□□□□ -0.68
NEDD8-206ENST00000531430 PI4K2BQ8TCG2 481 aa10.83□□□□□ -0.68
NEDD8-206ENST00000531430 RMDN3Q96TC7 470 aa10.83□□□□□ -0.68
NEDD8-206ENST00000531430 C17orf80Q9BSJ5 609 aa10.83□□□□□ -0.68
NEDD8-206ENST00000531430 LINC01553A4QN01 128 aa10.82□□□□□ -0.68
NEDD8-206ENST00000531430 H3BQ06 376 aaPredicted RBP10.82□□□□□ -0.68
NEDD8-206ENST00000531430 GJB5O95377 273 aa10.82□□□□□ -0.68
NEDD8-206ENST00000531430 MYCLP12524 364 aaPredicted RBP10.82□□□□□ -0.68
NEDD8-206ENST00000531430 EIF2AK2P19525 551 aaKnown RBP10.82□□□□□ -0.68
NEDD8-206ENST00000531430 MX1P20591 662 aa10.82□□□□□ -0.68
NEDD8-206ENST00000531430 EDNRBP24530 442 aa10.82□□□□□ -0.68
NEDD8-206ENST00000531430 THPOP40225 353 aa10.82□□□□□ -0.68
NEDD8-206ENST00000531430 ZNF543Q08ER8 600 aa10.82□□□□□ -0.68
NEDD8-206ENST00000531430 TCTN1Q2MV58 587 aa10.82□□□□□ -0.68
NEDD8-206ENST00000531430 ZNF618Q5T7W0 954 aa10.82□□□□□ -0.68
NEDD8-206ENST00000531430 ANKRD45Q5TZF3 282 aa10.82□□□□□ -0.68
NEDD8-206ENST00000531430 CCDC62Q6P9F0 684 aa10.82□□□□□ -0.68
NEDD8-206ENST00000531430 MFSD6Q6ZSS7 791 aa10.82□□□□□ -0.68
NEDD8-206ENST00000531430 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.82□□□□□ -0.68
NEDD8-206ENST00000531430 NSUN6Q8TEA1 469 aaKnown RBP10.82□□□□□ -0.68
NEDD8-206ENST00000531430 DHX38Q92620 1227 aaKnown RBP10.82□□□□□ -0.68
NEDD8-206ENST00000531430 KAT2BQ92831 832 aa10.82□□□□□ -0.68
NEDD8-206ENST00000531430 C11orf16Q9NQ32 467 aa10.82□□□□□ -0.68
NEDD8-206ENST00000531430 ANAPC4Q9UJX5 808 aa10.82□□□□□ -0.68
NEDD8-206ENST00000531430 ARIH1Q9Y4X5 557 aaPredicted RBP10.82□□□□□ -0.68
NEDD8-206ENST00000531430 INSL6Q9Y581 213 aa10.82□□□□□ -0.68
NEDD8-206ENST00000531430 MRVI1Q9Y6F6 885 aa10.82□□□□□ -0.68
NEDD8-206ENST00000531430 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.81□□□□□ -0.68
NEDD8-206ENST00000531430 FOXP2O15409 715 aa10.81□□□□□ -0.68
NEDD8-206ENST00000531430 PARNO95453 639 aaKnown RBP10.81□□□□□ -0.68
NEDD8-206ENST00000531430 CFBP00751 764 aa10.81□□□□□ -0.68
NEDD8-206ENST00000531430 AMHP03971 560 aa10.81□□□□□ -0.68
NEDD8-206ENST00000531430 ZNF286BP0CG31 522 aa10.81□□□□□ -0.68
NEDD8-206ENST00000531430 ALADP13716 330 aa10.81□□□□□ -0.68
NEDD8-206ENST00000531430 ARHGAP1Q07960 439 aa10.81□□□□□ -0.68
NEDD8-206ENST00000531430 MFSD10Q14728 455 aa10.81□□□□□ -0.68
NEDD8-206ENST00000531430 CDC37Q16543 378 aaPredicted RBP10.81□□□□□ -0.68
NEDD8-206ENST00000531430 KIAA0753Q2KHM9 967 aa10.81□□□□□ -0.68
NEDD8-206ENST00000531430 LEXMQ3ZCV2 418 aa10.81□□□□□ -0.68
NEDD8-206ENST00000531430 MCF2L2Q86YR7 1114 aa10.81□□□□□ -0.68
NEDD8-206ENST00000531430 FAM178BQ8IXR5 827 aa10.81□□□□□ -0.68
NEDD8-206ENST00000531430 SYTL5Q8TDW5 730 aaPredicted RBP10.81□□□□□ -0.68
NEDD8-206ENST00000531430 ZFP91Q96JP5 570 aaPredicted RBP10.81□□□□□ -0.68
NEDD8-206ENST00000531430 FAM227BQ96M60 508 aa10.81□□□□□ -0.68
NEDD8-206ENST00000531430 TTC14Q96N46 770 aa10.81□□□□□ -0.68
NEDD8-206ENST00000531430 HELLSQ9NRZ9 838 aa10.81□□□□□ -0.68
NEDD8-206ENST00000531430 TCP11L1Q9NUJ3 509 aa10.81□□□□□ -0.68
NEDD8-206ENST00000531430 GTF2IRD1Q9UHL9 959 aa10.81□□□□□ -0.68
NEDD8-206ENST00000531430 LRRC37A2A6NM11 1700 aa10.81□□□□□ -0.68
NEDD8-206ENST00000531430 BRWD1Q9NSI6 2320 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 SCN10AQ9Y5Y9 1956 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 RSPH10B2B2RC85 870 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 TRIM6-TRIM34B2RNG4 842 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 EFCAB14O75071 495 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 LGR5O75473 907 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 EIF3JO75822 258 aaKnown RBP10.8□□□□□ -0.68
NEDD8-206ENST00000531430 CSPG5O95196 566 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 CXCL10P02778 98 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 RSPH10BP0C881 870 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 NOVP48745 357 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 PTK7Q13308 1070 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 GPM6BQ13491 265 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 LAMC2Q13753 1193 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 ALX1Q15699 326 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 PTPROQ16827 1216 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 MCMDC2Q4G0Z9 681 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 DIEXFQ68CQ4 756 aaKnown RBP10.8□□□□□ -0.68
NEDD8-206ENST00000531430 RGS22Q8NE09 1264 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 DBF4BQ8NFT6 615 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 RILPL2Q969X0 211 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 EVI5LQ96CN4 794 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 KATNAL1Q9BW62 490 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 KAT14Q9H8E8 782 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 COL20A1Q9P218 1284 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 CTNNA3Q9UI47 895 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 DDX41Q9UJV9 622 aaKnown RBP10.8□□□□□ -0.68
NEDD8-206ENST00000531430 ABCB11O95342 1321 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 WDR19Q8NEZ3 1342 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 LCTP09848 1927 aa10.8□□□□□ -0.68
NEDD8-206ENST00000531430 MUC6Q6W4X9 2439 aa10.79□□□□□ -0.68
NEDD8-206ENST00000531430 GRXCR2A6NFK2 248 aa10.79□□□□□ -0.68
NEDD8-206ENST00000531430 PRR33A8MZF0 331 aa10.79□□□□□ -0.68
NEDD8-206ENST00000531430 NR3C2P08235 984 aa10.79□□□□□ -0.68
NEDD8-206ENST00000531430 FGRP09769 529 aa10.79□□□□□ -0.68
NEDD8-206ENST00000531430 HSPD1P10809 573 aaKnown RBP10.79□□□□□ -0.68
NEDD8-206ENST00000531430 EPC2Q52LR7 807 aa10.79□□□□□ -0.68
NEDD8-206ENST00000531430 GPATCH4Q5T3I0 446 aaKnown RBP10.79□□□□□ -0.68
NEDD8-206ENST00000531430 SESTD1Q86VW0 696 aa10.79□□□□□ -0.68
NEDD8-206ENST00000531430 FBXO11Q86XK2 927 aa10.79□□□□□ -0.68
NEDD8-206ENST00000531430 ADGRF4Q8IZF3 695 aa10.79□□□□□ -0.68
NEDD8-206ENST00000531430 BANK1Q8NDB2 785 aa10.79□□□□□ -0.68
NEDD8-206ENST00000531430 ESR2Q92731 530 aa10.79□□□□□ -0.68
NEDD8-206ENST00000531430 WNT8BQ93098 351 aa10.79□□□□□ -0.68
NEDD8-206ENST00000531430 SPATA33Q96N06 139 aa10.79□□□□□ -0.68
NEDD8-206ENST00000531430 CTAGE1Q96RT6 745 aa10.79□□□□□ -0.68
NEDD8-206ENST00000531430 IWS1Q96ST2 819 aa10.79□□□□□ -0.68
NEDD8-206ENST00000531430 YME1L1Q96TA2 773 aa10.79□□□□□ -0.68
NEDD8-206ENST00000531430 MRPL11Q9Y3B7 192 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms