RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 IL31RAQ8NI17 732 aa18.33■□□□□ 0.52
BRK1-201ENST00000530758 HMX1Q9NP08 348 aaPredicted RBP18.33■□□□□ 0.52
BRK1-201ENST00000530758 BTBD18B2RXH4 712 aa18.32■□□□□ 0.52
BRK1-201ENST00000530758 EDIL3O43854 480 aa18.32■□□□□ 0.52
BRK1-201ENST00000530758 RGS20O76081 388 aa18.32■□□□□ 0.52
BRK1-201ENST00000530758 MYCP01106 439 aaPredicted RBP18.32■□□□□ 0.52
BRK1-201ENST00000530758 PDCP20941 246 aa18.32■□□□□ 0.52
BRK1-201ENST00000530758 USP11P51784 963 aa18.32■□□□□ 0.52
BRK1-201ENST00000530758 MTFR1Q15390 333 aa18.32■□□□□ 0.52
BRK1-201ENST00000530758 LARP1BQ659C4 914 aaKnown RBP18.32■□□□□ 0.52
BRK1-201ENST00000530758 IQSEC1Q6DN90 963 aa18.32■□□□□ 0.52
BRK1-201ENST00000530758 KRT25Q7Z3Z0 450 aa18.32■□□□□ 0.52
BRK1-201ENST00000530758 DIS3L2Q8IYB7 885 aaKnown RBP18.32■□□□□ 0.52
BRK1-201ENST00000530758 RASGRP4Q8TDF6 673 aa18.32■□□□□ 0.52
BRK1-201ENST00000530758 OXER1Q8TDS5 423 aa18.32■□□□□ 0.52
BRK1-201ENST00000530758 FOXP1Q9H334 677 aaPredicted RBP18.32■□□□□ 0.52
BRK1-201ENST00000530758 BRMS1Q9HCU9 246 aa18.32■□□□□ 0.52
BRK1-201ENST00000530758 PAK6Q9NQU5 681 aaPredicted RBP18.32■□□□□ 0.52
BRK1-201ENST00000530758 DDX49Q9Y6V7 483 aaKnown RBP18.32■□□□□ 0.52
BRK1-201ENST00000530758 MAFGO15525 162 aa18.31■□□□□ 0.52
BRK1-201ENST00000530758 SEPT4O43236 478 aa18.31■□□□□ 0.52
BRK1-201ENST00000530758 PDIA4P13667 645 aaKnown RBP18.31■□□□□ 0.52
BRK1-201ENST00000530758 CAPN2P17655 700 aa18.31■□□□□ 0.52
BRK1-201ENST00000530758 U2AF2P26368 475 aaKnown RBP eCLIP18.31■□□□□ 0.522e-6■■□□□ 13.2
BRK1-201ENST00000530758 CCND3P30281 292 aaPredicted RBP18.31■□□□□ 0.52
BRK1-201ENST00000530758 ICAM3P32942 547 aa18.31■□□□□ 0.52
BRK1-201ENST00000530758 CIITAP33076 1130 aa18.31■□□□□ 0.52
BRK1-201ENST00000530758 SAFBQ15424 915 aaKnown RBP eCLIP18.31■□□□□ 0.52
BRK1-201ENST00000530758 INPP4AQ96PE3 977 aaPredicted RBP18.31■□□□□ 0.52
BRK1-201ENST00000530758 UBIAD1Q9Y5Z9 338 aa18.31■□□□□ 0.52
BRK1-201ENST00000530758 TGFB3P10600 412 aa18.3■□□□□ 0.52
BRK1-201ENST00000530758 MYCLP12524 364 aaPredicted RBP18.3■□□□□ 0.52
BRK1-201ENST00000530758 ARHGAP4P98171 946 aa18.3■□□□□ 0.52
BRK1-201ENST00000530758 NR5A1Q13285 461 aa18.3■□□□□ 0.52
BRK1-201ENST00000530758 NONOQ15233 471 aaKnown RBP eCLIP18.3■□□□□ 0.52
BRK1-201ENST00000530758 CCDC144BQ3MJ40 725 aa18.3■□□□□ 0.52
BRK1-201ENST00000530758 CCDC62Q6P9F0 684 aa18.3■□□□□ 0.52
BRK1-201ENST00000530758 KCNV1Q6PIU1 500 aa18.3■□□□□ 0.52
BRK1-201ENST00000530758 PGBD1Q96JS3 809 aa18.3■□□□□ 0.52
BRK1-201ENST00000530758 FAM184BQ9ULE4 1060 aa18.3■□□□□ 0.52
BRK1-201ENST00000530758 FRMPD3Q5JV73 1810 aa18.29■□□□□ 0.52
BRK1-201ENST00000530758 CYP3A7-CYP3A51PA0A087WV96 503 aa18.29■□□□□ 0.52
BRK1-201ENST00000530758 MEIS1O00470 390 aa18.29■□□□□ 0.52
BRK1-201ENST00000530758 MSCO60682 206 aa18.29■□□□□ 0.52
BRK1-201ENST00000530758 CCL5P13501 91 aa18.29■□□□□ 0.52
BRK1-201ENST00000530758 AKR1A1P14550 325 aa18.29■□□□□ 0.52
BRK1-201ENST00000530758 SYT1P21579 422 aa18.29■□□□□ 0.52
BRK1-201ENST00000530758 CYP3A7P24462 503 aa18.29■□□□□ 0.52
BRK1-201ENST00000530758 NKX3-2P78367 333 aa18.29■□□□□ 0.52
BRK1-201ENST00000530758 GUCY1B3Q02153 619 aa18.29■□□□□ 0.52
BRK1-201ENST00000530758 LHX8Q68G74 356 aa18.29■□□□□ 0.52
BRK1-201ENST00000530758 MOXD1Q6UVY6 613 aa18.29■□□□□ 0.52
BRK1-201ENST00000530758 NIPA1Q7RTP0 329 aa18.29■□□□□ 0.52
BRK1-201ENST00000530758 FBXO16Q8IX29 292 aaPredicted RBP18.29■□□□□ 0.52
BRK1-201ENST00000530758 TBCKQ8TEA7 893 aa18.29■□□□□ 0.52
BRK1-201ENST00000530758 SCFD2Q8WU76 684 aa18.29■□□□□ 0.52
BRK1-201ENST00000530758 MXRA8Q9BRK3 442 aa18.29■□□□□ 0.52
BRK1-201ENST00000530758 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.29■□□□□ 0.52
BRK1-201ENST00000530758 UNC93B1Q9H1C4 597 aa18.29■□□□□ 0.52
BRK1-201ENST00000530758 JADE2Q9NQC1 790 aa18.29■□□□□ 0.52
BRK1-201ENST00000530758 PDGFCQ9NRA1 345 aa18.29■□□□□ 0.52
BRK1-201ENST00000530758 Q9Y3F1 56 aa18.29■□□□□ 0.52
BRK1-201ENST00000530758 CCDC194A0A1B0GVG4 234 aa18.28■□□□□ 0.52
BRK1-201ENST00000530758 SPATA31C2B4DYI2 1134 aa18.28■□□□□ 0.52
BRK1-201ENST00000530758 GJB1P08034 283 aa18.28■□□□□ 0.52
BRK1-201ENST00000530758 ITGB5P18084 799 aa18.28■□□□□ 0.52
BRK1-201ENST00000530758 CEP55Q53EZ4 464 aa18.28■□□□□ 0.52
BRK1-201ENST00000530758 EARS2Q5JPH6 523 aaKnown RBP18.28■□□□□ 0.52
BRK1-201ENST00000530758 EEPD1Q7L9B9 569 aa18.28■□□□□ 0.52
BRK1-201ENST00000530758 GPRASP2Q96D09 838 aa18.28■□□□□ 0.52
BRK1-201ENST00000530758 MBOAT7Q96N66 472 aa18.28■□□□□ 0.52
BRK1-201ENST00000530758 DDX20Q9UHI6 824 aaKnown RBP18.28■□□□□ 0.52
BRK1-201ENST00000530758 ZHX1Q9UKY1 873 aaPredicted RBP18.28■□□□□ 0.52
BRK1-201ENST00000530758 GNEQ9Y223 722 aaKnown RBP18.28■□□□□ 0.52
BRK1-201ENST00000530758 IGLV3-22A0A075B6J6 115 aa18.27■□□□□ 0.52
BRK1-201ENST00000530758 NKRFO15226 690 aaKnown RBP eCLIP18.27■□□□□ 0.52
BRK1-201ENST00000530758 DUSP11O75319 330 aaKnown RBP18.27■□□□□ 0.52
BRK1-201ENST00000530758 HSP90AA1P07900 732 aaKnown RBP18.27■□□□□ 0.52
BRK1-201ENST00000530758 ADCYAP1R1P41586 468 aa18.27■□□□□ 0.52
BRK1-201ENST00000530758 FOSBP53539 338 aa18.27■□□□□ 0.52
BRK1-201ENST00000530758 TTLL4Q14679 1199 aa18.27■□□□□ 0.52
BRK1-201ENST00000530758 GNPTABQ3T906 1256 aa18.27■□□□□ 0.52
BRK1-201ENST00000530758 DUSP28Q4G0W2 176 aa18.27■□□□□ 0.52
BRK1-201ENST00000530758 NLRX1Q86UT6 975 aa18.27■□□□□ 0.52
BRK1-201ENST00000530758 CDHR1Q96JP9 859 aa18.27■□□□□ 0.52
BRK1-201ENST00000530758 SENP7Q9BQF6 1050 aa18.27■□□□□ 0.52
BRK1-201ENST00000530758 TMEM106CQ9BVX2 250 aa18.27■□□□□ 0.52
BRK1-201ENST00000530758 WDR11Q9BZH6 1224 aa18.27■□□□□ 0.52
BRK1-201ENST00000530758 CRISPLD2Q9H0B8 497 aa18.27■□□□□ 0.52
BRK1-201ENST00000530758 RNF208Q9H0X6 261 aa18.27■□□□□ 0.52
BRK1-201ENST00000530758 DDX41Q9UJV9 622 aaKnown RBP18.27■□□□□ 0.52
BRK1-201ENST00000530758 KIF28PB7ZC32 967 aa18.26■□□□□ 0.51
BRK1-201ENST00000530758 FAM86B1E9PN63 330 aa18.26■□□□□ 0.51
BRK1-201ENST00000530758 H3BQV1 296 aa18.26■□□□□ 0.51
BRK1-201ENST00000530758 ADCY6O43306 1168 aa18.26■□□□□ 0.51
BRK1-201ENST00000530758 FIBPO43427 364 aa18.26■□□□□ 0.51
BRK1-201ENST00000530758 FAM86B2P0C5J1 330 aa18.26■□□□□ 0.51
BRK1-201ENST00000530758 SMPD1P17405 629 aa18.26■□□□□ 0.51
BRK1-201ENST00000530758 TNFAIP2Q03169 654 aa18.26■□□□□ 0.51
BRK1-201ENST00000530758 SEMA3FQ13275 785 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms