RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 KAT14Q9H8E8 782 aa17.45■□□□□ 0.38
CAPN1-219ENST00000530495 ZSWIM5Q9P217 1185 aa17.45■□□□□ 0.38
CAPN1-219ENST00000530495 PRRC2BQ5JSZ5 2229 aaKnown RBP17.45■□□□□ 0.38
CAPN1-219ENST00000530495 PTPRSQ13332 1948 aa17.45■□□□□ 0.38
CAPN1-219ENST00000530495 LAMA4Q16363 1823 aa17.44■□□□□ 0.38
CAPN1-219ENST00000530495 EIF3JO75822 258 aaKnown RBP17.44■□□□□ 0.38
CAPN1-219ENST00000530495 ARHGEF15O94989 841 aa17.44■□□□□ 0.38
CAPN1-219ENST00000530495 PARNO95453 639 aaKnown RBP17.44■□□□□ 0.38
CAPN1-219ENST00000530495 RBL2Q08999 1139 aa17.44■□□□□ 0.38
CAPN1-219ENST00000530495 SKIV2LQ15477 1246 aaKnown RBP17.44■□□□□ 0.38
CAPN1-219ENST00000530495 DGKDQ16760 1214 aa17.44■□□□□ 0.38
CAPN1-219ENST00000530495 SMC5Q8IY18 1101 aa17.44■□□□□ 0.38
CAPN1-219ENST00000530495 ARNTL2Q8WYA1 636 aa17.44■□□□□ 0.38
CAPN1-219ENST00000530495 EMID1Q96A84 441 aaPredicted RBP17.44■□□□□ 0.38
CAPN1-219ENST00000530495 OSBPL3Q9H4L5 887 aa17.44■□□□□ 0.38
CAPN1-219ENST00000530495 DDX41Q9UJV9 622 aaKnown RBP17.44■□□□□ 0.38
CAPN1-219ENST00000530495 MRPL11Q9Y3B7 192 aaKnown RBP17.44■□□□□ 0.38
CAPN1-219ENST00000530495 BDP1A6H8Y1 2624 aa17.44■□□□□ 0.38
CAPN1-219ENST00000530495 MYH7BA7E2Y1 1941 aa17.43■□□□□ 0.38
CAPN1-219ENST00000530495 B4E1Z4 1266 aa17.43■□□□□ 0.38
CAPN1-219ENST00000530495 TLL1O43897 1013 aa17.43■□□□□ 0.38
CAPN1-219ENST00000530495 SELPP16109 830 aa17.43■□□□□ 0.38
CAPN1-219ENST00000530495 KCNQ1P51787 676 aa17.43■□□□□ 0.38
CAPN1-219ENST00000530495 QRICH1Q2TAL8 776 aa17.43■□□□□ 0.38
CAPN1-219ENST00000530495 LRRC8DQ7L1W4 858 aa17.43■□□□□ 0.38
CAPN1-219ENST00000530495 CHST3Q7LGC8 479 aa17.43■□□□□ 0.38
CAPN1-219ENST00000530495 FBXO11Q86XK2 927 aa17.43■□□□□ 0.38
CAPN1-219ENST00000530495 ENAHQ8N8S7 591 aaPredicted RBP17.43■□□□□ 0.38
CAPN1-219ENST00000530495 DHX38Q92620 1227 aaKnown RBP17.43■□□□□ 0.38
CAPN1-219ENST00000530495 NECAB3Q96P71 396 aaPredicted RBP17.43■□□□□ 0.38
CAPN1-219ENST00000530495 JMJD4Q9H9V9 463 aa17.43■□□□□ 0.38
CAPN1-219ENST00000530495 GTF2IRD1Q9UHL9 959 aa17.43■□□□□ 0.38
CAPN1-219ENST00000530495 COG5Q9UP83 839 aa17.43■□□□□ 0.38
CAPN1-219ENST00000530495 NCOR1O75376 2440 aa17.43■□□□□ 0.38
CAPN1-219ENST00000530495 NR3C2P08235 984 aa17.42■□□□□ 0.38
CAPN1-219ENST00000530495 PARP1P09874 1014 aaKnown RBP17.42■□□□□ 0.38
CAPN1-219ENST00000530495 KCNJ6P48051 423 aa17.42■□□□□ 0.38
CAPN1-219ENST00000530495 WDR5P61964 334 aaKnown RBP17.42■□□□□ 0.38
CAPN1-219ENST00000530495 AAMPQ13685 434 aa17.42■□□□□ 0.38
CAPN1-219ENST00000530495 LAMC2Q13753 1193 aa17.42■□□□□ 0.38
CAPN1-219ENST00000530495 ARHGEF16Q5VV41 709 aa17.42■□□□□ 0.38
CAPN1-219ENST00000530495 KRT40Q6A162 431 aa17.42■□□□□ 0.38
CAPN1-219ENST00000530495 CWC27Q6UX04 472 aaKnown RBP17.42■□□□□ 0.38
CAPN1-219ENST00000530495 PLEKHM2Q8IWE5 1019 aa17.42■□□□□ 0.38
CAPN1-219ENST00000530495 VAT1LQ9HCJ6 419 aa17.42■□□□□ 0.38
CAPN1-219ENST00000530495 HDAC6Q9UBN7 1215 aa17.42■□□□□ 0.38
CAPN1-219ENST00000530495 LPXNO60711 386 aa17.41■□□□□ 0.38
CAPN1-219ENST00000530495 CXCL10P02778 98 aa17.41■□□□□ 0.38
CAPN1-219ENST00000530495 CKBP12277 381 aa17.41■□□□□ 0.38
CAPN1-219ENST00000530495 EIF2AK2P19525 551 aaKnown RBP17.41■□□□□ 0.38
CAPN1-219ENST00000530495 HSD17B4P51659 736 aa17.41■□□□□ 0.38
CAPN1-219ENST00000530495 GRB10Q13322 594 aa17.41■□□□□ 0.38
CAPN1-219ENST00000530495 B4GALNT3Q6L9W6 998 aa17.41■□□□□ 0.38
CAPN1-219ENST00000530495 CNKSR3Q6P9H4 555 aa17.41■□□□□ 0.38
CAPN1-219ENST00000530495 C7orf31Q8N865 590 aa17.41■□□□□ 0.38
CAPN1-219ENST00000530495 DSCC1Q9BVC3 393 aa17.41■□□□□ 0.38
CAPN1-219ENST00000530495 KATNAL1Q9BW62 490 aa17.41■□□□□ 0.38
CAPN1-219ENST00000530495 RWDD1Q9H446 243 aaPredicted RBP17.41■□□□□ 0.38
CAPN1-219ENST00000530495 PXMP2Q9NR77 195 aa17.41■□□□□ 0.38
CAPN1-219ENST00000530495 XIRP2A4UGR9 3374 aa17.4■□□□□ 0.38
CAPN1-219ENST00000530495 ABHD14A-ACY1A0A1B0GW23 586 aa17.4■□□□□ 0.38
CAPN1-219ENST00000530495 HAS3O00219 553 aa17.4■□□□□ 0.38
CAPN1-219ENST00000530495 OPLAHO14841 1288 aa17.4■□□□□ 0.38
CAPN1-219ENST00000530495 DHX16O60231 1041 aaKnown RBP17.4■□□□□ 0.38
CAPN1-219ENST00000530495 NBNO60934 754 aa17.4■□□□□ 0.38
CAPN1-219ENST00000530495 CFBP00751 764 aa17.4■□□□□ 0.38
CAPN1-219ENST00000530495 PSEN2P49810 448 aa17.4■□□□□ 0.38
CAPN1-219ENST00000530495 GHRHRQ02643 423 aa17.4■□□□□ 0.38
CAPN1-219ENST00000530495 PTK7Q13308 1070 aa17.4■□□□□ 0.38
CAPN1-219ENST00000530495 IMMTQ16891 758 aaKnown RBP17.4■□□□□ 0.38
CAPN1-219ENST00000530495 CHD1LQ86WJ1 897 aa17.4■□□□□ 0.38
CAPN1-219ENST00000530495 PPTC7Q8NI37 304 aa17.4■□□□□ 0.38
CAPN1-219ENST00000530495 HLA-CQ95604 372 aa17.4■□□□□ 0.38
CAPN1-219ENST00000530495 ZBED2Q9BTP6 218 aa17.4■□□□□ 0.38
CAPN1-219ENST00000530495 AMNQ9BXJ7 453 aa17.4■□□□□ 0.38
CAPN1-219ENST00000530495 KRT23Q9C075 422 aa17.4■□□□□ 0.38
CAPN1-219ENST00000530495 DIAPH3Q9NSV4 1193 aa17.4■□□□□ 0.38
CAPN1-219ENST00000530495 MAP3K20Q9NYL2 800 aaKnown RBP17.4■□□□□ 0.38
CAPN1-219ENST00000530495 LMCD1Q9NZU5 365 aa17.4■□□□□ 0.38
CAPN1-219ENST00000530495 CTNNA3Q9UI47 895 aa17.4■□□□□ 0.38
CAPN1-219ENST00000530495 LCHNA4D1U4 455 aa17.39■□□□□ 0.37
CAPN1-219ENST00000530495 HIP1O00291 1037 aa17.39■□□□□ 0.37
CAPN1-219ENST00000530495 PPFIA4O75335 1185 aa17.39■□□□□ 0.37
CAPN1-219ENST00000530495 F2P00734 622 aa17.39■□□□□ 0.37
CAPN1-219ENST00000530495 HOXD8P13378 290 aaPredicted RBP17.39■□□□□ 0.37
CAPN1-219ENST00000530495 DEFB103AP81534 67 aa17.39■□□□□ 0.37
CAPN1-219ENST00000530495 NUCB1Q02818 461 aa17.39■□□□□ 0.37
CAPN1-219ENST00000530495 MFSD10Q14728 455 aa17.39■□□□□ 0.37
CAPN1-219ENST00000530495 STOX1Q6ZVD7 989 aa17.39■□□□□ 0.37
CAPN1-219ENST00000530495 SPRED2Q7Z698 418 aa17.39■□□□□ 0.37
CAPN1-219ENST00000530495 TMCO2Q7Z6W1 182 aaPredicted RBP17.39■□□□□ 0.37
CAPN1-219ENST00000530495 DHX37Q8IY37 1157 aaKnown RBP17.39■□□□□ 0.37
CAPN1-219ENST00000530495 SAMD3Q8N6K7 520 aa17.39■□□□□ 0.37
CAPN1-219ENST00000530495 ALG1Q9BT22 464 aa17.39■□□□□ 0.37
CAPN1-219ENST00000530495 C1QTNF1Q9BXJ1 281 aa17.39■□□□□ 0.37
CAPN1-219ENST00000530495 CNNM2Q9H8M5 875 aa17.39■□□□□ 0.37
CAPN1-219ENST00000530495 RAPGEFL1Q9UHV5 662 aa17.39■□□□□ 0.37
CAPN1-219ENST00000530495 MRVI1Q9Y6F6 885 aa17.39■□□□□ 0.37
CAPN1-219ENST00000530495 EFCAB14O75071 495 aa17.38■□□□□ 0.37
CAPN1-219ENST00000530495 RGS20O76081 388 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms