RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 SGSM2O43147 1006 aa7.28□□□□□ -1.24
USP47-209ENST00000530041 PLA2G1BP04054 148 aaKnown RBP7.28□□□□□ -1.24
USP47-209ENST00000530041 SLC6A11P48066 632 aa7.28□□□□□ -1.24
USP47-209ENST00000530041 HTRA3P83110 453 aa7.28□□□□□ -1.24
USP47-209ENST00000530041 CACNB2Q08289 660 aaPredicted RBP7.28□□□□□ -1.24
USP47-209ENST00000530041 NLRP10Q86W26 655 aa7.28□□□□□ -1.24
USP47-209ENST00000530041 TMEM169Q96HH4 297 aa7.28□□□□□ -1.24
USP47-209ENST00000530041 IER2Q9BTL4 223 aa7.28□□□□□ -1.24
USP47-209ENST00000530041 TANGO6Q9C0B7 1094 aa7.28□□□□□ -1.24
USP47-209ENST00000530041 PCDHA2Q9Y5H9 948 aa7.28□□□□□ -1.24
USP47-209ENST00000530041 PMF1-BGLAPU3KQ54 211 aa7.28□□□□□ -1.24
USP47-209ENST00000530041 LCP1P13796 627 aa7.27□□□□□ -1.25
USP47-209ENST00000530041 ATP2B1P20020 1258 aa7.27□□□□□ -1.25
USP47-209ENST00000530041 LSAMPQ13449 338 aa7.27□□□□□ -1.25
USP47-209ENST00000530041 LCE1DQ5T752 114 aa7.27□□□□□ -1.25
USP47-209ENST00000530041 FNIP1Q8TF40 1166 aa7.27□□□□□ -1.25
USP47-209ENST00000530041 ZNF669Q96BR6 464 aaPredicted RBP7.27□□□□□ -1.25
USP47-209ENST00000530041 FBXL7Q9UJT9 491 aa7.27□□□□□ -1.25
USP47-209ENST00000530041 MSRB2Q9Y3D2 182 aa7.27□□□□□ -1.25
USP47-209ENST00000530041 H7BY64 318 aa7.26□□□□□ -1.25
USP47-209ENST00000530041 FFAR3O14843 346 aa7.26□□□□□ -1.25
USP47-209ENST00000530041 U2SURPO15042 1029 aaKnown RBP7.26□□□□□ -1.25
USP47-209ENST00000530041 DLX3O60479 287 aa7.26□□□□□ -1.25
USP47-209ENST00000530041 TP53I13Q8NBR0 393 aaPredicted RBP7.26□□□□□ -1.25
USP47-209ENST00000530041 SMARCC2Q8TAQ2 1214 aa7.26□□□□□ -1.25
USP47-209ENST00000530041 AARSD1Q9BTE6 412 aaKnown RBP7.26□□□□□ -1.25
USP47-209ENST00000530041 COA3Q9Y2R0 106 aaPredicted RBP7.26□□□□□ -1.25
USP47-209ENST00000530041 SASH1O94885 1247 aa7.25□□□□□ -1.25
USP47-209ENST00000530041 FGFR1P11362 822 aa7.25□□□□□ -1.25
USP47-209ENST00000530041 HOXA5P20719 270 aa7.25□□□□□ -1.25
USP47-209ENST00000530041 VWA3BQ502W6 1294 aa7.25□□□□□ -1.25
USP47-209ENST00000530041 NBPF6Q5VWK0 638 aa7.25□□□□□ -1.25
USP47-209ENST00000530041 ETV3LQ6ZN32 361 aa7.25□□□□□ -1.25
USP47-209ENST00000530041 SAPCD2Q86UD0 394 aa7.25□□□□□ -1.25
USP47-209ENST00000530041 MIB1Q86YT6 1006 aa7.25□□□□□ -1.25
USP47-209ENST00000530041 SP8Q8IXZ3 490 aa7.25□□□□□ -1.25
USP47-209ENST00000530041 LRRC47Q8N1G4 583 aaKnown RBP7.25□□□□□ -1.25
USP47-209ENST00000530041 CHAMP1Q96JM3 812 aa7.25□□□□□ -1.25
USP47-209ENST00000530041 NBPF4Q96M43 638 aa7.25□□□□□ -1.25
USP47-209ENST00000530041 LUC7LQ9NQ29 371 aaKnown RBP7.25□□□□□ -1.25
USP47-209ENST00000530041 ARHGEF4Q9NR80 690 aa7.25□□□□□ -1.25
USP47-209ENST00000530041 GPR27Q9NS67 375 aa7.25□□□□□ -1.25
USP47-209ENST00000530041 PPP1R1BQ9UD71 204 aaPredicted RBP7.25□□□□□ -1.25
USP47-209ENST00000530041 PALD1Q9ULE6 856 aa7.25□□□□□ -1.25
USP47-209ENST00000530041 CHRNA2Q15822 529 aa7.24□□□□□ -1.25
USP47-209ENST00000530041 LILRA6Q6PI73 481 aa7.24□□□□□ -1.25
USP47-209ENST00000530041 RSPO2Q6UXX9 243 aaPredicted RBP7.24□□□□□ -1.25
USP47-209ENST00000530041 MILR1Q7Z6M3 343 aa7.24□□□□□ -1.25
USP47-209ENST00000530041 CLDND1Q9NY35 253 aa7.24□□□□□ -1.25
USP47-209ENST00000530041 TRAV20A0A0B4J274 112 aa7.23□□□□□ -1.25
USP47-209ENST00000530041 SH3D21A4FU49 640 aa7.23□□□□□ -1.25
USP47-209ENST00000530041 PDPK1O15530 556 aa7.23□□□□□ -1.25
USP47-209ENST00000530041 PRODHO43272 600 aa7.23□□□□□ -1.25
USP47-209ENST00000530041 PABPC1P11940 636 aaKnown RBP7.23□□□□□ -1.25
USP47-209ENST00000530041 USP53Q70EK8 1073 aa7.23□□□□□ -1.25
USP47-209ENST00000530041 ARMC5Q96C12 935 aa7.23□□□□□ -1.25
USP47-209ENST00000530041 CCDC113Q9H0I3 377 aa7.23□□□□□ -1.25
USP47-209ENST00000530041 XYLT2Q9H1B5 865 aa7.23□□□□□ -1.25
USP47-209ENST00000530041 ZNF652Q9Y2D9 606 aa7.23□□□□□ -1.25
USP47-209ENST00000530041 HGSO14964 777 aaPredicted RBP7.22□□□□□ -1.25
USP47-209ENST00000530041 C8BP07358 591 aa7.22□□□□□ -1.25
USP47-209ENST00000530041 CYP2C8P10632 490 aa7.22□□□□□ -1.25
USP47-209ENST00000530041 CTSWP56202 376 aa7.22□□□□□ -1.25
USP47-209ENST00000530041 DLX2Q07687 328 aaPredicted RBP7.22□□□□□ -1.25
USP47-209ENST00000530041 RASGRF1Q13972 1273 aa7.22□□□□□ -1.25
USP47-209ENST00000530041 NSMFQ6X4W1 530 aa7.22□□□□□ -1.25
USP47-209ENST00000530041 DCAF4Q8WV16 495 aa7.22□□□□□ -1.25
USP47-209ENST00000530041 OSBP2Q969R2 916 aa7.22□□□□□ -1.25
USP47-209ENST00000530041 DDX11Q96FC9 970 aa7.22□□□□□ -1.25
USP47-209ENST00000530041 C20orf173Q96LM9 149 aa7.22□□□□□ -1.25
USP47-209ENST00000530041 NOX5Q96PH1 765 aa7.22□□□□□ -1.25
USP47-209ENST00000530041 PHF20Q9BVI0 1012 aa7.22□□□□□ -1.25
USP47-209ENST00000530041 HIRIP3Q9BW71 556 aaPredicted RBP7.22□□□□□ -1.25
USP47-209ENST00000530041 SPATA9Q9BWV2 254 aa7.22□□□□□ -1.25
USP47-209ENST00000530041 CDIP1Q9H305 208 aa7.22□□□□□ -1.25
USP47-209ENST00000530041 EPB41L1Q9H4G0 881 aa7.22□□□□□ -1.25
USP47-209ENST00000530041 PCDH18Q9HCL0 1135 aa7.22□□□□□ -1.25
USP47-209ENST00000530041 SIRPGQ9P1W8 387 aa7.22□□□□□ -1.25
USP47-209ENST00000530041 MSCO60682 206 aa7.21□□□□□ -1.26
USP47-209ENST00000530041 DGKIO75912 1065 aa7.21□□□□□ -1.26
USP47-209ENST00000530041 GTF2F1P35269 517 aaKnown RBP eCLIP7.21□□□□□ -1.26
USP47-209ENST00000530041 SLURP1P55000 103 aa7.21□□□□□ -1.26
USP47-209ENST00000530041 EMC4Q5J8M3 183 aa7.21□□□□□ -1.26
USP47-209ENST00000530041 STEAP3Q658P3 488 aa7.21□□□□□ -1.26
USP47-209ENST00000530041 LIPIQ6XZB0 460 aa7.21□□□□□ -1.26
USP47-209ENST00000530041 SPATC1Q76KD6 591 aa7.21□□□□□ -1.26
USP47-209ENST00000530041 FAM126BQ8IXS8 530 aa7.21□□□□□ -1.26
USP47-209ENST00000530041 LINC00482Q8N8I6 264 aa7.21□□□□□ -1.26
USP47-209ENST00000530041 FEZF2Q8TBJ5 459 aa7.21□□□□□ -1.26
USP47-209ENST00000530041 ZNF526Q8TF50 670 aaPredicted RBP7.21□□□□□ -1.26
USP47-209ENST00000530041 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.21□□□□□ -1.26
USP47-209ENST00000530041 A0A0G2JLL6 359 aaPredicted RBP7.2□□□□□ -1.26
USP47-209ENST00000530041 OTOL1A6NHN0 477 aaPredicted RBP7.2□□□□□ -1.26
USP47-209ENST00000530041 KRTAP9-7A8MTY7 169 aa7.2□□□□□ -1.26
USP47-209ENST00000530041 TADA3O75528 432 aa7.2□□□□□ -1.26
USP47-209ENST00000530041 KCNC1P48547 511 aa7.2□□□□□ -1.26
USP47-209ENST00000530041 NTRK3Q16288 839 aa7.2□□□□□ -1.26
USP47-209ENST00000530041 YOD1Q5VVQ6 348 aaPredicted RBP7.2□□□□□ -1.26
USP47-209ENST00000530041 CD300LDQ6UXZ3 194 aa7.2□□□□□ -1.26
USP47-209ENST00000530041 ZC3H18Q86VM9 953 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms