RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 RXRAP19793 462 aa17.85■□□□□ 0.45
CCDC90B-215ENST00000529745 COL9A1P20849 921 aa17.85■□□□□ 0.45
CCDC90B-215ENST00000529745 PTGS1P23219 599 aa17.85■□□□□ 0.45
CCDC90B-215ENST00000529745 FAAP100Q0VG06 881 aa17.85■□□□□ 0.45
CCDC90B-215ENST00000529745 FUT2Q10981 343 aa17.85■□□□□ 0.45
CCDC90B-215ENST00000529745 PGM5Q15124 567 aa17.85■□□□□ 0.45
CCDC90B-215ENST00000529745 BLOC1S2Q6QNY1 142 aa17.85■□□□□ 0.45
CCDC90B-215ENST00000529745 VSIG10LQ86VR7 867 aa17.85■□□□□ 0.45
CCDC90B-215ENST00000529745 CNTNAP5Q8WYK1 1306 aa17.85■□□□□ 0.45
CCDC90B-215ENST00000529745 GUCD1Q96NT3 240 aa17.85■□□□□ 0.45
CCDC90B-215ENST00000529745 TRIM43BA6NCK2 446 aa17.84■□□□□ 0.45
CCDC90B-215ENST00000529745 DCDC2CA8MYV0 355 aa17.84■□□□□ 0.45
CCDC90B-215ENST00000529745 KPNA6O60684 536 aa17.84■□□□□ 0.45
CCDC90B-215ENST00000529745 TXNP10599 105 aaKnown RBP17.84■□□□□ 0.45
CCDC90B-215ENST00000529745 PSMA5P28066 241 aa17.84■□□□□ 0.45
CCDC90B-215ENST00000529745 CXCL17Q6UXB2 119 aa17.84■□□□□ 0.45
CCDC90B-215ENST00000529745 FAM126BQ8IXS8 530 aa17.84■□□□□ 0.45
CCDC90B-215ENST00000529745 OR6J1Q8NGC5 347 aa17.84■□□□□ 0.45
CCDC90B-215ENST00000529745 EMID1Q96A84 441 aaPredicted RBP17.84■□□□□ 0.45
CCDC90B-215ENST00000529745 TRIM43Q96BQ3 446 aaPredicted RBP17.84■□□□□ 0.45
CCDC90B-215ENST00000529745 TCEANC2Q96MN5 208 aa17.84■□□□□ 0.45
CCDC90B-215ENST00000529745 JAKMIP1Q96N16 626 aaKnown RBP17.84■□□□□ 0.45
CCDC90B-215ENST00000529745 USP26Q9BXU7 913 aa17.84■□□□□ 0.45
CCDC90B-215ENST00000529745 GRIN2DO15399 1336 aa17.83■□□□□ 0.44
CCDC90B-215ENST00000529745 MEIS2O14770 477 aa17.83■□□□□ 0.44
CCDC90B-215ENST00000529745 STAM2O75886 525 aa17.83■□□□□ 0.44
CCDC90B-215ENST00000529745 CD4P01730 458 aa17.83■□□□□ 0.44
CCDC90B-215ENST00000529745 RPS6KB1P23443 525 aa17.83■□□□□ 0.44
CCDC90B-215ENST00000529745 HOXA13P31271 388 aaPredicted RBP17.83■□□□□ 0.44
CCDC90B-215ENST00000529745 EVCP57679 992 aa17.83■□□□□ 0.44
CCDC90B-215ENST00000529745 PURAQ00577 322 aaKnown RBP17.83■□□□□ 0.44
CCDC90B-215ENST00000529745 RTN1Q16799 776 aa17.83■□□□□ 0.44
CCDC90B-215ENST00000529745 BRDTQ58F21 947 aaPredicted RBP17.83■□□□□ 0.44
CCDC90B-215ENST00000529745 KCNV1Q6PIU1 500 aa17.83■□□□□ 0.44
CCDC90B-215ENST00000529745 SH3RF1Q7Z6J0 888 aa17.83■□□□□ 0.44
CCDC90B-215ENST00000529745 LBHD1Q9BQE6 289 aaPredicted RBP17.83■□□□□ 0.44
CCDC90B-215ENST00000529745 FAM217BQ9NTX9 383 aaPredicted RBP17.83■□□□□ 0.44
CCDC90B-215ENST00000529745 DDX41Q9UJV9 622 aaKnown RBP17.83■□□□□ 0.44
CCDC90B-215ENST00000529745 TBX21Q9UL17 535 aa17.83■□□□□ 0.44
CCDC90B-215ENST00000529745 KLF18A0A0U1RQI7 1052 aa17.82■□□□□ 0.44
CCDC90B-215ENST00000529745 hCG_1984214I3L0E3 225 aa17.82■□□□□ 0.44
CCDC90B-215ENST00000529745 PQBP1O60828 265 aaKnown RBP17.82■□□□□ 0.44
CCDC90B-215ENST00000529745 RGS20O76081 388 aa17.82■□□□□ 0.44
CCDC90B-215ENST00000529745 GH1P01241 217 aa17.82■□□□□ 0.44
CCDC90B-215ENST00000529745 TGFB3P10600 412 aa17.82■□□□□ 0.44
CCDC90B-215ENST00000529745 CCND2P30279 289 aa17.82■□□□□ 0.44
CCDC90B-215ENST00000529745 MDM2Q00987 491 aaPredicted RBP17.82■□□□□ 0.44
CCDC90B-215ENST00000529745 ARHGAP1Q07960 439 aa17.82■□□□□ 0.44
CCDC90B-215ENST00000529745 ITGA7Q13683 1181 aa17.82■□□□□ 0.44
CCDC90B-215ENST00000529745 FAM109BQ6ICB4 259 aaPredicted RBP17.82■□□□□ 0.44
CCDC90B-215ENST00000529745 Q6ZUG5 572 aa17.82■□□□□ 0.44
CCDC90B-215ENST00000529745 CMTR1Q8N1G2 835 aaKnown RBP17.82■□□□□ 0.44
CCDC90B-215ENST00000529745 ZNF713Q8N859 430 aaPredicted RBP17.82■□□□□ 0.44
CCDC90B-215ENST00000529745 TM6SF1Q9BZW5 370 aa17.82■□□□□ 0.44
CCDC90B-215ENST00000529745 UBE2OQ9C0C9 1292 aaKnown RBP17.82■□□□□ 0.44
CCDC90B-215ENST00000529745 TLR3O15455 904 aaKnown RBP17.81■□□□□ 0.44
CCDC90B-215ENST00000529745 PPP1R18Q6NYC8 613 aa17.81■□□□□ 0.44
CCDC90B-215ENST00000529745 XRRA1Q6P2D8 792 aa17.81■□□□□ 0.44
CCDC90B-215ENST00000529745 SEPT14Q6ZU15 432 aa17.81■□□□□ 0.44
CCDC90B-215ENST00000529745 RAB11FIP4Q86YS3 637 aa17.81■□□□□ 0.44
CCDC90B-215ENST00000529745 IL31RAQ8NI17 732 aa17.81■□□□□ 0.44
CCDC90B-215ENST00000529745 PIBF1Q8WXW3 757 aa17.81■□□□□ 0.44
CCDC90B-215ENST00000529745 COPS5Q92905 334 aa17.81■□□□□ 0.44
CCDC90B-215ENST00000529745 ZSWIM6Q9HCJ5 1215 aa17.81■□□□□ 0.44
CCDC90B-215ENST00000529745 PRDM5Q9NQX1 630 aaPredicted RBP17.81■□□□□ 0.44
CCDC90B-215ENST00000529745 DOCK5Q9H7D0 1870 aa17.81■□□□□ 0.44
CCDC90B-215ENST00000529745 CCDC196A0A1B0GTZ2 297 aa17.8■□□□□ 0.44
CCDC90B-215ENST00000529745 GOLGA8AA7E2F4 631 aa17.8■□□□□ 0.44
CCDC90B-215ENST00000529745 GOLGA8BA8MQT2 603 aa17.8■□□□□ 0.44
CCDC90B-215ENST00000529745 CPA1P15085 419 aa17.8■□□□□ 0.44
CCDC90B-215ENST00000529745 ITGB8P26012 769 aa17.8■□□□□ 0.44
CCDC90B-215ENST00000529745 CDC27P30260 824 aa17.8■□□□□ 0.44
CCDC90B-215ENST00000529745 ICAM3P32942 547 aa17.8■□□□□ 0.44
CCDC90B-215ENST00000529745 LY6KQ17RY6 165 aa17.8■□□□□ 0.44
CCDC90B-215ENST00000529745 FCHSD1Q86WN1 690 aa17.8■□□□□ 0.44
CCDC90B-215ENST00000529745 CUL5Q93034 780 aa17.8■□□□□ 0.44
CCDC90B-215ENST00000529745 VTI1AQ96AJ9 217 aa17.8■□□□□ 0.44
CCDC90B-215ENST00000529745 INPP4AQ96PE3 977 aaPredicted RBP17.8■□□□□ 0.44
CCDC90B-215ENST00000529745 MTG1Q9BT17 334 aaPredicted RBP17.8■□□□□ 0.44
CCDC90B-215ENST00000529745 TMEM39AQ9NV64 488 aa17.8■□□□□ 0.44
CCDC90B-215ENST00000529745 TIMP1P01033 207 aa17.79■□□□□ 0.44
CCDC90B-215ENST00000529745 MMP3P08254 477 aa17.79■□□□□ 0.44
CCDC90B-215ENST00000529745 MYCLP12524 364 aaPredicted RBP17.79■□□□□ 0.44
CCDC90B-215ENST00000529745 HOXD8P13378 290 aaPredicted RBP17.79■□□□□ 0.44
CCDC90B-215ENST00000529745 CASTP20810 708 aaKnown RBP17.79■□□□□ 0.44
CCDC90B-215ENST00000529745 MRPS9P82933 396 aaKnown RBP17.79■□□□□ 0.44
CCDC90B-215ENST00000529745 PTPN11Q06124 597 aaPredicted RBP17.79■□□□□ 0.44
CCDC90B-215ENST00000529745 APOBRQ0VD83 1088 aa17.79■□□□□ 0.44
CCDC90B-215ENST00000529745 PCNX4Q63HM2 1172 aa17.79■□□□□ 0.44
CCDC90B-215ENST00000529745 RUFY3Q7L099 469 aa17.79■□□□□ 0.44
CCDC90B-215ENST00000529745 SMARCC2Q8TAQ2 1214 aa17.79■□□□□ 0.44
CCDC90B-215ENST00000529745 BADQ92934 168 aa17.79■□□□□ 0.44
CCDC90B-215ENST00000529745 BRF1Q92994 677 aa17.79■□□□□ 0.44
CCDC90B-215ENST00000529745 PSTPIP2Q9H939 334 aa17.79■□□□□ 0.44
CCDC90B-215ENST00000529745 MRVI1Q9Y6F6 885 aa17.79■□□□□ 0.44
CCDC90B-215ENST00000529745 TANC1Q9C0D5 1861 aa17.79■□□□□ 0.44
CCDC90B-215ENST00000529745 RAG1P15918 1043 aa17.78■□□□□ 0.44
CCDC90B-215ENST00000529745 METAP2P50579 478 aaKnown RBP eCLIP17.78■□□□□ 0.44
CCDC90B-215ENST00000529745 FGD1P98174 961 aa17.78■□□□□ 0.44
CCDC90B-215ENST00000529745 LAMC2Q13753 1193 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms