RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 DLX3O60479 287 aa6.8□□□□□ -1.32
C11orf88-204ENST00000529661 CAPNS1P04632 268 aa6.8□□□□□ -1.32
C11orf88-204ENST00000529661 LIMS1P48059 325 aa6.8□□□□□ -1.32
C11orf88-204ENST00000529661 GTF2A2P52657 109 aa6.8□□□□□ -1.32
C11orf88-204ENST00000529661 YOD1Q5VVQ6 348 aaPredicted RBP6.8□□□□□ -1.32
C11orf88-204ENST00000529661 LCNL1Q6ZST4 164 aa6.8□□□□□ -1.32
C11orf88-204ENST00000529661 SPATC1Q76KD6 591 aa6.8□□□□□ -1.32
C11orf88-204ENST00000529661 NLRP10Q86W26 655 aa6.8□□□□□ -1.32
C11orf88-204ENST00000529661 DCP2Q8IU60 420 aaKnown RBP6.8□□□□□ -1.32
C11orf88-204ENST00000529661 TRMT2BQ96GJ1 504 aaKnown RBP6.8□□□□□ -1.32
C11orf88-204ENST00000529661 TMEM169Q96HH4 297 aa6.8□□□□□ -1.32
C11orf88-204ENST00000529661 MRFAP1L1Q96HT8 127 aa6.8□□□□□ -1.32
C11orf88-204ENST00000529661 CCDC113Q9H0I3 377 aa6.8□□□□□ -1.32
C11orf88-204ENST00000529661 AP5M1Q9H0R1 490 aa6.8□□□□□ -1.32
C11orf88-204ENST00000529661 TMA7Q9Y2S6 64 aaKnown RBP6.8□□□□□ -1.32
C11orf88-204ENST00000529661 MSRB2Q9Y3D2 182 aa6.8□□□□□ -1.32
C11orf88-204ENST00000529661 PMLP29590 882 aa6.79□□□□□ -1.32
C11orf88-204ENST00000529661 MC3RP41968 323 aa6.79□□□□□ -1.32
C11orf88-204ENST00000529661 SLC9A5Q14940 896 aa6.79□□□□□ -1.32
C11orf88-204ENST00000529661 LCE4AQ5TA78 99 aa6.79□□□□□ -1.32
C11orf88-204ENST00000529661 CNKSR3Q6P9H4 555 aa6.79□□□□□ -1.32
C11orf88-204ENST00000529661 NSMFQ6X4W1 530 aa6.79□□□□□ -1.32
C11orf88-204ENST00000529661 TMEFF1Q8IYR6 380 aa6.79□□□□□ -1.32
C11orf88-204ENST00000529661 TSPAN17Q96FV3 270 aa6.79□□□□□ -1.32
C11orf88-204ENST00000529661 SRPK1Q96SB4 655 aaKnown RBP6.79□□□□□ -1.32
C11orf88-204ENST00000529661 EPB41L4AQ9HCS5 686 aaPredicted RBP6.79□□□□□ -1.32
C11orf88-204ENST00000529661 FAN1Q9Y2M0 1017 aa6.79□□□□□ -1.32
C11orf88-204ENST00000529661 COA3Q9Y2R0 106 aaPredicted RBP6.79□□□□□ -1.32
C11orf88-204ENST00000529661 TRAV20A0A0B4J274 112 aa6.78□□□□□ -1.32
C11orf88-204ENST00000529661 FAM221BA6H8Z2 402 aa6.78□□□□□ -1.32
C11orf88-204ENST00000529661 ASGR2P07307 311 aa6.78□□□□□ -1.32
C11orf88-204ENST00000529661 FGFR1P11362 822 aa6.78□□□□□ -1.32
C11orf88-204ENST00000529661 PABPC1P11940 636 aaKnown RBP6.78□□□□□ -1.32
C11orf88-204ENST00000529661 FBLN1P23142 703 aa6.78□□□□□ -1.32
C11orf88-204ENST00000529661 AFF3P51826 1226 aaKnown RBP6.78□□□□□ -1.32
C11orf88-204ENST00000529661 SSRP1Q08945 709 aaKnown RBP6.78□□□□□ -1.32
C11orf88-204ENST00000529661 RASGRF1Q13972 1273 aa6.78□□□□□ -1.32
C11orf88-204ENST00000529661 RASA3Q14644 834 aa6.78□□□□□ -1.32
C11orf88-204ENST00000529661 TESK1Q15569 626 aa6.78□□□□□ -1.32
C11orf88-204ENST00000529661 KRTAP19-4Q3LI73 84 aa6.78□□□□□ -1.32
C11orf88-204ENST00000529661 FBLN7Q53RD9 439 aa6.78□□□□□ -1.32
C11orf88-204ENST00000529661 LCE1DQ5T752 114 aa6.78□□□□□ -1.32
C11orf88-204ENST00000529661 TCERG1LQ5VWI1 586 aa6.78□□□□□ -1.32
C11orf88-204ENST00000529661 FAM129CQ86XR2 697 aa6.78□□□□□ -1.32
C11orf88-204ENST00000529661 OSBP2Q969R2 916 aa6.78□□□□□ -1.32
C11orf88-204ENST00000529661 PWWP2AQ96N64 755 aa6.78□□□□□ -1.32
C11orf88-204ENST00000529661 SPATA9Q9BWV2 254 aa6.78□□□□□ -1.32
C11orf88-204ENST00000529661 CLDND1Q9NY35 253 aa6.78□□□□□ -1.32
C11orf88-204ENST00000529661 SNTG2Q9NY99 539 aa6.78□□□□□ -1.32
C11orf88-204ENST00000529661 IRS2Q9Y4H2 1338 aa6.77□□□□□ -1.32
C11orf88-204ENST00000529661 NCAM1P13591 858 aa6.77□□□□□ -1.33
C11orf88-204ENST00000529661 ATF2P15336 505 aa6.77□□□□□ -1.33
C11orf88-204ENST00000529661 IGFBP6P24592 240 aaPredicted RBP6.77□□□□□ -1.33
C11orf88-204ENST00000529661 LSAMPQ13449 338 aa6.77□□□□□ -1.33
C11orf88-204ENST00000529661 MROH9Q5TGP6 573 aa6.77□□□□□ -1.33
C11orf88-204ENST00000529661 SDE2Q6IQ49 451 aa6.77□□□□□ -1.33
C11orf88-204ENST00000529661 TMEM151BQ8IW70 566 aa6.77□□□□□ -1.33
C11orf88-204ENST00000529661 ZNF669Q96BR6 464 aaPredicted RBP6.77□□□□□ -1.33
C11orf88-204ENST00000529661 DEPDC7Q96QD5 511 aa6.77□□□□□ -1.33
C11orf88-204ENST00000529661 PHF20Q9BVI0 1012 aa6.77□□□□□ -1.33
C11orf88-204ENST00000529661 RNF38Q9H0F5 515 aa6.77□□□□□ -1.33
C11orf88-204ENST00000529661 BLACEA4D250 179 aa6.76□□□□□ -1.33
C11orf88-204ENST00000529661 SGSM2O43147 1006 aa6.76□□□□□ -1.33
C11orf88-204ENST00000529661 DIAPH1O60610 1272 aaKnown RBP6.76□□□□□ -1.33
C11orf88-204ENST00000529661 ZBTB7AO95365 584 aa6.76□□□□□ -1.33
C11orf88-204ENST00000529661 IFRD2Q12894 506 aaPredicted RBP6.76□□□□□ -1.33
C11orf88-204ENST00000529661 JAZF1Q86VZ6 243 aa6.76□□□□□ -1.33
C11orf88-204ENST00000529661 RIOX2Q8IUF8 465 aa6.76□□□□□ -1.33
C11orf88-204ENST00000529661 Q8N1Y9 231 aa6.76□□□□□ -1.33
C11orf88-204ENST00000529661 NLGN1Q8N2Q7 840 aa6.76□□□□□ -1.33
C11orf88-204ENST00000529661 DACT3Q96B18 629 aaPredicted RBP6.76□□□□□ -1.33
C11orf88-204ENST00000529661 CDC6Q99741 560 aa6.76□□□□□ -1.33
C11orf88-204ENST00000529661 GPR27Q9NS67 375 aa6.76□□□□□ -1.33
C11orf88-204ENST00000529661 PALD1Q9ULE6 856 aa6.76□□□□□ -1.33
C11orf88-204ENST00000529661 NPFFR2Q9Y5X5 522 aa6.76□□□□□ -1.33
C11orf88-204ENST00000529661 X6R8D5 127 aa6.76□□□□□ -1.33
C11orf88-204ENST00000529661 H7BY64 318 aa6.75□□□□□ -1.33
C11orf88-204ENST00000529661 MSCO60682 206 aa6.75□□□□□ -1.33
C11orf88-204ENST00000529661 FOXO4P98177 505 aa6.75□□□□□ -1.33
C11orf88-204ENST00000529661 VMACQ2NL98 169 aa6.75□□□□□ -1.33
C11orf88-204ENST00000529661 EGFLAMQ63HQ2 1017 aa6.75□□□□□ -1.33
C11orf88-204ENST00000529661 KCNT2Q6UVM3 1135 aa6.75□□□□□ -1.33
C11orf88-204ENST00000529661 AMIGO3Q86WK7 504 aa6.75□□□□□ -1.33
C11orf88-204ENST00000529661 SIAH1Q8IUQ4 282 aa6.75□□□□□ -1.33
C11orf88-204ENST00000529661 DCAF4Q8WV16 495 aa6.75□□□□□ -1.33
C11orf88-204ENST00000529661 SEC14L1Q92503 715 aa6.75□□□□□ -1.33
C11orf88-204ENST00000529661 PMF1-BGLAPU3KQ54 211 aa6.75□□□□□ -1.33
C11orf88-204ENST00000529661 ADCY3O60266 1144 aa6.74□□□□□ -1.33
C11orf88-204ENST00000529661 DGKIO75912 1065 aa6.74□□□□□ -1.33
C11orf88-204ENST00000529661 SLC6A11P48066 632 aa6.74□□□□□ -1.33
C11orf88-204ENST00000529661 NTRK3Q16288 839 aa6.74□□□□□ -1.33
C11orf88-204ENST00000529661 MILR1Q7Z6M3 343 aa6.74□□□□□ -1.33
C11orf88-204ENST00000529661 B3GNT8Q7Z7M8 397 aa6.74□□□□□ -1.33
C11orf88-204ENST00000529661 RNPC3Q96LT9 517 aaKnown RBP6.74□□□□□ -1.33
C11orf88-204ENST00000529661 PUS7Q96PZ0 661 aaKnown RBP6.74□□□□□ -1.33
C11orf88-204ENST00000529661 MRPL42Q9Y6G3 142 aaKnown RBP6.74□□□□□ -1.33
C11orf88-204ENST00000529661 BMP7P18075 431 aa6.73□□□□□ -1.33
C11orf88-204ENST00000529661 RSPO2Q6UXX9 243 aaPredicted RBP6.73□□□□□ -1.33
C11orf88-204ENST00000529661 ETV3LQ6ZN32 361 aa6.73□□□□□ -1.33
C11orf88-204ENST00000529661 LILRB2Q8N423 598 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms