RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 SV2BQ7L1I2 683 aa17.33■□□□□ 0.36
CCDC90B-213ENST00000529611 ZNF280CQ8ND82 737 aa17.33■□□□□ 0.36
CCDC90B-213ENST00000529611 CYP2W1Q8TAV3 490 aa17.33■□□□□ 0.36
CCDC90B-213ENST00000529611 CACTINQ8WUQ7 758 aaKnown RBP17.33■□□□□ 0.36
CCDC90B-213ENST00000529611 RAD54LQ92698 747 aa17.33■□□□□ 0.36
CCDC90B-213ENST00000529611 RPAP3Q9H6T3 665 aaPredicted RBP17.33■□□□□ 0.36
CCDC90B-213ENST00000529611 AS3MTQ9HBK9 375 aa17.33■□□□□ 0.36
CCDC90B-213ENST00000529611 SLC38A10Q9HBR0 1119 aa17.33■□□□□ 0.36
CCDC90B-213ENST00000529611 IMPACTQ9P2X3 320 aa17.33■□□□□ 0.36
CCDC90B-213ENST00000529611 PPP1R9AQ9ULJ8 1098 aa17.33■□□□□ 0.36
CCDC90B-213ENST00000529611 IGLV3-22A0A075B6J6 115 aa17.32■□□□□ 0.36
CCDC90B-213ENST00000529611 ASIC1P78348 528 aa17.32■□□□□ 0.36
CCDC90B-213ENST00000529611 PAK1Q13153 545 aa17.32■□□□□ 0.36
CCDC90B-213ENST00000529611 ARID5BQ14865 1188 aa17.32■□□□□ 0.36
CCDC90B-213ENST00000529611 ADSSL1Q8N142 457 aa17.32■□□□□ 0.36
CCDC90B-213ENST00000529611 GIMAP8Q8ND71 665 aaPredicted RBP17.32■□□□□ 0.36
CCDC90B-213ENST00000529611 FAM20AQ96MK3 541 aa17.32■□□□□ 0.36
CCDC90B-213ENST00000529611 INTS13Q9NVM9 706 aa17.32■□□□□ 0.36
CCDC90B-213ENST00000529611 RWDD2AQ9UIY3 292 aa17.32■□□□□ 0.36
CCDC90B-213ENST00000529611 PHIPQ8WWQ0 1821 aa17.31■□□□□ 0.36
CCDC90B-213ENST00000529611 MSH4O15457 936 aa17.31■□□□□ 0.36
CCDC90B-213ENST00000529611 CDK11BP21127 795 aaKnown RBP17.31■□□□□ 0.36
CCDC90B-213ENST00000529611 STAT3P40763 770 aa17.31■□□□□ 0.36
CCDC90B-213ENST00000529611 CDKAL1Q5VV42 579 aa17.31■□□□□ 0.36
CCDC90B-213ENST00000529611 TMC6Q7Z403 805 aa17.31■□□□□ 0.36
CCDC90B-213ENST00000529611 ADARB2Q9NS39 739 aaKnown RBP17.31■□□□□ 0.36
CCDC90B-213ENST00000529611 MAPK8IP1Q9UQF2 711 aa17.31■□□□□ 0.36
CCDC90B-213ENST00000529611 KDM3AQ9Y4C1 1321 aa17.31■□□□□ 0.36
CCDC90B-213ENST00000529611 MYMKA6NI61 221 aa17.31■□□□□ 0.36
CCDC90B-213ENST00000529611 ZNF76P36508 570 aa17.31■□□□□ 0.36
CCDC90B-213ENST00000529611 CCT6AP40227 531 aaKnown RBP17.31■□□□□ 0.36
CCDC90B-213ENST00000529611 HSD17B4P51659 736 aa17.31■□□□□ 0.36
CCDC90B-213ENST00000529611 SUPT20HL1Q3ZLR7 823 aa17.31■□□□□ 0.36
CCDC90B-213ENST00000529611 LRRC8AQ8IWT6 810 aa17.31■□□□□ 0.36
CCDC90B-213ENST00000529611 KIAA1524Q8TCG1 905 aa17.31■□□□□ 0.36
CCDC90B-213ENST00000529611 NELFBQ8WX92 580 aa17.31■□□□□ 0.36
CCDC90B-213ENST00000529611 CLEC4DQ8WXI8 215 aa17.31■□□□□ 0.36
CCDC90B-213ENST00000529611 NT5C3AQ9H0P0 336 aa17.31■□□□□ 0.36
CCDC90B-213ENST00000529611 ZHX2Q9Y6X8 837 aa17.31■□□□□ 0.36
CCDC90B-213ENST00000529611 PARP14Q460N5 1801 aa17.31■□□□□ 0.36
CCDC90B-213ENST00000529611 NFIBO00712 420 aa17.3■□□□□ 0.36
CCDC90B-213ENST00000529611 SLC26A4O43511 780 aa17.3■□□□□ 0.36
CCDC90B-213ENST00000529611 COBLO75128 1261 aa17.3■□□□□ 0.36
CCDC90B-213ENST00000529611 NOL9Q5SY16 702 aaKnown RBP17.3■□□□□ 0.36
CCDC90B-213ENST00000529611 CPXCR1Q8N123 301 aa17.3■□□□□ 0.36
CCDC90B-213ENST00000529611 RAVER2Q9HCJ3 691 aaKnown RBP17.3■□□□□ 0.36
CCDC90B-213ENST00000529611 EXOC1Q9NV70 894 aa17.3■□□□□ 0.36
CCDC90B-213ENST00000529611 GSDMDP57764 484 aa17.29■□□□□ 0.36
CCDC90B-213ENST00000529611 UBXN2AP68543 259 aa17.29■□□□□ 0.36
CCDC90B-213ENST00000529611 GHRHRQ02643 423 aa17.29■□□□□ 0.36
CCDC90B-213ENST00000529611 PDE4DQ08499 809 aa17.29■□□□□ 0.36
CCDC90B-213ENST00000529611 C9orf131Q5VYM1 1079 aa17.29■□□□□ 0.36
CCDC90B-213ENST00000529611 APTXQ7Z2E3 356 aaKnown RBP17.29■□□□□ 0.36
CCDC90B-213ENST00000529611 VSTM4Q8IW00 320 aa17.29■□□□□ 0.36
CCDC90B-213ENST00000529611 C17orf53Q8N3J3 647 aaPredicted RBP17.29■□□□□ 0.36
CCDC90B-213ENST00000529611 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.29■□□□□ 0.36
CCDC90B-213ENST00000529611 CCDC47Q96A33 483 aaKnown RBP17.29■□□□□ 0.36
CCDC90B-213ENST00000529611 C12orf42Q96LP6 360 aa17.29■□□□□ 0.36
CCDC90B-213ENST00000529611 EHMT1Q9H9B1 1298 aa17.29■□□□□ 0.36
CCDC90B-213ENST00000529611 POTEB3A0JP26 581 aa17.29■□□□□ 0.36
CCDC90B-213ENST00000529611 POTECB2RU33 542 aa17.29■□□□□ 0.36
CCDC90B-213ENST00000529611 HMGCS2P54868 508 aa17.29■□□□□ 0.36
CCDC90B-213ENST00000529611 CNNM4Q6P4Q7 775 aa17.29■□□□□ 0.36
CCDC90B-213ENST00000529611 POTEBQ6S5H4 581 aa17.29■□□□□ 0.36
CCDC90B-213ENST00000529611 VAV3Q9UKW4 847 aa17.29■□□□□ 0.36
CCDC90B-213ENST00000529611 MED24O75448 989 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 ALAS1P13196 640 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 STK4Q13043 487 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 PRKG1Q13976 671 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 HAUS3Q68CZ6 603 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 DLK2Q6UY11 383 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 COL20A1Q9P218 1284 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 KIAA1024Q9UPX6 916 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 RLFQ13129 1914 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 A0A1B0GTH6 734 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 PVALEFA0A1B0GWK0 134 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 C19orf81C9J6K1 198 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 VWA5AO00534 786 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 USP2O75604 605 aaPredicted RBP17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 FCER1AP12319 257 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 STIM1Q13586 685 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 TPD52L1Q16890 204 aaPredicted RBP17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 MUM1L1Q5H9M0 696 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 NCAPH2Q6IBW4 605 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 UNC13DQ70J99 1090 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 DYMQ7RTS9 669 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 MCF2L2Q86YR7 1114 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 DDX12PQ92771 950 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 ATG4CQ96DT6 458 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 WNK4Q96J92 1243 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 GTPBP4Q9BZE4 634 aaKnown RBP17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 LRRC27Q9C0I9 530 aa17.28■□□□□ 0.36
CCDC90B-213ENST00000529611 TRIM49BA6NDI0 452 aa17.27■□□□□ 0.36
CCDC90B-213ENST00000529611 E9PMD0 336 aa17.27■□□□□ 0.36
CCDC90B-213ENST00000529611 ZBED4O75132 1171 aa17.27■□□□□ 0.36
CCDC90B-213ENST00000529611 FDX1P10109 184 aa17.27■□□□□ 0.36
CCDC90B-213ENST00000529611 PMS1P54277 932 aaKnown RBP17.27■□□□□ 0.36
CCDC90B-213ENST00000529611 NOLC1Q14978 699 aaKnown RBP eCLIP17.27■□□□□ 0.36
CCDC90B-213ENST00000529611 PTPN21Q16825 1174 aa17.27■□□□□ 0.36
CCDC90B-213ENST00000529611 CEP55Q53EZ4 464 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms