RNA–Protein interactions for RNA: ENST00000529430.1

CLP1-203, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 5 BASIC

Gene CLP1, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-203ENST00000529430 URI1O94763 535 aaPredicted RBP13.18□□□□□ -0.3
CLP1-203ENST00000529430 FGFR1OPO95684 399 aaKnown RBP13.18□□□□□ -0.3
CLP1-203ENST00000529430 DNM2P50570 870 aa13.18□□□□□ -0.3
CLP1-203ENST00000529430 TSR1Q2NL82 804 aaKnown RBP13.18□□□□□ -0.3
CLP1-203ENST00000529430 TMEM179Q6ZVK1 233 aa13.18□□□□□ -0.3
CLP1-203ENST00000529430 UNC13DQ70J99 1090 aa13.18□□□□□ -0.3
CLP1-203ENST00000529430 SH3BP5LQ7L8J4 393 aa13.18□□□□□ -0.3
CLP1-203ENST00000529430 SAMD7Q7Z3H4 446 aa13.18□□□□□ -0.3
CLP1-203ENST00000529430 MB21D1Q8N884 522 aa13.18□□□□□ -0.3
CLP1-203ENST00000529430 IQCDQ96DY2 449 aa13.18□□□□□ -0.3
CLP1-203ENST00000529430 NUP88Q99567 741 aaPredicted RBP13.18□□□□□ -0.3
CLP1-203ENST00000529430 NUP58Q9BVL2 599 aa13.18□□□□□ -0.3
CLP1-203ENST00000529430 PSTPIP2Q9H939 334 aa13.18□□□□□ -0.3
CLP1-203ENST00000529430 GPRC5DQ9NZD1 345 aa13.18□□□□□ -0.3
CLP1-203ENST00000529430 DDX25Q9UHL0 483 aaKnown RBP13.18□□□□□ -0.3
CLP1-203ENST00000529430 MAPK8IP1Q9UQF2 711 aa13.18□□□□□ -0.3
CLP1-203ENST00000529430 ADGRG1Q9Y653 693 aa13.18□□□□□ -0.3
CLP1-203ENST00000529430 MARCH6O60337 910 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 SLC1A4P43007 532 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 PSMD2Q13200 908 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 GRB10Q13322 594 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 TUBB2AQ13885 445 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 SEPT2Q15019 361 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 C9orf131Q5VYM1 1079 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 SLFN13Q68D06 897 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 TTBK2Q6IQ55 1244 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 TATDN1Q6P1N9 297 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 IRF2BP1Q8IU81 584 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 CSGALNACT2Q8N6G5 542 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 RETREG2Q8NC44 543 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 LARP4BQ92615 738 aaKnown RBP13.17□□□□□ -0.3
CLP1-203ENST00000529430 TUBB2BQ9BVA1 445 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 ABHD10Q9NUJ1 306 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 FHOD1Q9Y613 1164 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 KDM3AQ9Y4C1 1321 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 SHTN1A0MZ66 631 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 SOWAHDA6NJG2 315 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 USP17L10C9JJH3 530 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 KIF5CO60282 957 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 COBLO75128 1261 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 TADA3O75528 432 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 ZRANB2O95218 330 aaKnown RBP eCLIP13.17□□□□□ -0.3
CLP1-203ENST00000529430 TDP2O95551 362 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 PNMA6AP0CW24 399 aaPredicted RBP13.17□□□□□ -0.3
CLP1-203ENST00000529430 FXR1P51114 621 aaKnown RBP eCLIP13.17□□□□□ -0.3
CLP1-203ENST00000529430 USP11P51784 963 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 ABCB5Q2M3G0 1257 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 TEX35Q5T0J7 233 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 RAD9BQ6WBX8 426 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 CLEC10AQ8IUN9 316 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 APOBEC3FQ8IUX4 373 aaKnown RBP13.17□□□□□ -0.3
CLP1-203ENST00000529430 SNX29Q8TEQ0 813 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 RAD54LQ92698 747 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 HOOK2Q96ED9 719 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 TMEM39BQ9GZU3 492 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 CALCOCO1Q9P1Z2 691 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 SYNPO2Q9UMS6 1093 aa13.17□□□□□ -0.3
CLP1-203ENST00000529430 BAZ2BQ9UIF8 2168 aaKnown RBP13.16□□□□□ -0.3
CLP1-203ENST00000529430 TRIM49BA6NDI0 452 aa13.16□□□□□ -0.3
CLP1-203ENST00000529430 SLC37A4O43826 429 aa13.16□□□□□ -0.3
CLP1-203ENST00000529430 TBC1D12O60347 775 aa13.16□□□□□ -0.3
CLP1-203ENST00000529430 PPP1R11O60927 126 aaPredicted RBP13.16□□□□□ -0.3
CLP1-203ENST00000529430 EEF2P13639 858 aaKnown RBP13.16□□□□□ -0.3
CLP1-203ENST00000529430 KRT9P35527 623 aa13.16□□□□□ -0.3
CLP1-203ENST00000529430 MAP3K9P80192 1104 aa13.16□□□□□ -0.3
CLP1-203ENST00000529430 AP3B2Q13367 1082 aa13.16□□□□□ -0.3
CLP1-203ENST00000529430 RASA3Q14644 834 aa13.16□□□□□ -0.3
CLP1-203ENST00000529430 TMEM119Q4V9L6 283 aa13.16□□□□□ -0.3
CLP1-203ENST00000529430 FOXR2Q6PJQ5 311 aa13.16□□□□□ -0.3
CLP1-203ENST00000529430 MOXD1Q6UVY6 613 aa13.16□□□□□ -0.3
CLP1-203ENST00000529430 KCTD1Q719H9 257 aa13.16□□□□□ -0.3
CLP1-203ENST00000529430 TEX2Q8IWB9 1127 aa13.16□□□□□ -0.3
CLP1-203ENST00000529430 GMCL1P1Q8NEA9 526 aa13.16□□□□□ -0.3
CLP1-203ENST00000529430 OR8K1Q8NGG5 319 aa13.16□□□□□ -0.3
CLP1-203ENST00000529430 ZNF507Q8TCN5 953 aa13.16□□□□□ -0.3
CLP1-203ENST00000529430 LRRC15Q8TF66 581 aa13.16□□□□□ -0.3
CLP1-203ENST00000529430 PNMA5Q96PV4 448 aa13.16□□□□□ -0.3
CLP1-203ENST00000529430 DUSP9Q99956 384 aaKnown RBP13.16□□□□□ -0.3
CLP1-203ENST00000529430 NT5C3AQ9H0P0 336 aa13.16□□□□□ -0.3
CLP1-203ENST00000529430 DNAJC18Q9H819 358 aa13.16□□□□□ -0.3
CLP1-203ENST00000529430 HACL1Q9UJ83 578 aa13.16□□□□□ -0.3
CLP1-203ENST00000529430 STK24Q9Y6E0 443 aa13.16□□□□□ -0.3
CLP1-203ENST00000529430 CNTNAP1P78357 1384 aa13.15□□□□□ -0.3
CLP1-203ENST00000529430 FAM196BA6NMK8 535 aa13.15□□□□□ -0.3
CLP1-203ENST00000529430 SLC16A2P36021 539 aa13.15□□□□□ -0.3
CLP1-203ENST00000529430 PMS1P54277 932 aaKnown RBP13.15□□□□□ -0.3
CLP1-203ENST00000529430 STK4Q13043 487 aa13.15□□□□□ -0.3
CLP1-203ENST00000529430 TRAF1Q13077 416 aa13.15□□□□□ -0.3
CLP1-203ENST00000529430 UBE2SQ16763 222 aa13.15□□□□□ -0.3
CLP1-203ENST00000529430 GUF1Q8N442 669 aaKnown RBP13.15□□□□□ -0.3
CLP1-203ENST00000529430 GMCL1Q96IK5 515 aa13.15□□□□□ -0.3
CLP1-203ENST00000529430 TUBGCP2Q9BSJ2 902 aa13.15□□□□□ -0.3
CLP1-203ENST00000529430 DESI2Q9BSY9 194 aa13.15□□□□□ -0.3
CLP1-203ENST00000529430 BMP2KQ9NSY1 1161 aaPredicted RBP13.15□□□□□ -0.3
CLP1-203ENST00000529430 BLOC1S4Q9NUP1 217 aa13.15□□□□□ -0.3
CLP1-203ENST00000529430 MYO1AQ9UBC5 1043 aa13.15□□□□□ -0.3
CLP1-203ENST00000529430 CAPN11Q9UMQ6 739 aa13.15□□□□□ -0.3
CLP1-203ENST00000529430 LUC7L2Q9Y383 392 aaKnown RBP13.15□□□□□ -0.3
CLP1-203ENST00000529430 ABCB11O95342 1321 aa13.15□□□□□ -0.3
CLP1-203ENST00000529430 ZC3H4Q9UPT8 1303 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms