RNA–Protein interactions for RNA: ENST00000528748.5

CDC27-206, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-206ENST00000528748 PCDHA1Q9Y5I3 950 aa12.66□□□□□ -0.38
CDC27-206ENST00000528748 ZNFX1Q9P2E3 1918 aaKnown RBP12.66□□□□□ -0.38
CDC27-206ENST00000528748 ABCB11O95342 1321 aa12.65□□□□□ -0.38
CDC27-206ENST00000528748 PPFIA3O75145 1194 aa12.65□□□□□ -0.38
CDC27-206ENST00000528748 CDKL5O76039 1030 aa12.65□□□□□ -0.38
CDC27-206ENST00000528748 TAL1P17542 331 aaPredicted RBP12.65□□□□□ -0.38
CDC27-206ENST00000528748 AKAP17AQ02040 695 aaKnown RBP12.65□□□□□ -0.38
CDC27-206ENST00000528748 ARHGEF6Q15052 776 aa12.65□□□□□ -0.38
CDC27-206ENST00000528748 PFKFB3Q16875 520 aaPredicted RBP12.65□□□□□ -0.38
CDC27-206ENST00000528748 USH1GQ495M9 461 aa12.65□□□□□ -0.38
CDC27-206ENST00000528748 MUM1L1Q5H9M0 696 aa12.65□□□□□ -0.38
CDC27-206ENST00000528748 WDR78Q5VTH9 848 aa12.65□□□□□ -0.38
CDC27-206ENST00000528748 TRIM22Q8IYM9 498 aa12.65□□□□□ -0.38
CDC27-206ENST00000528748 CLEC4DQ8WXI8 215 aa12.65□□□□□ -0.38
CDC27-206ENST00000528748 SYMPKQ92797 1274 aaKnown RBP12.65□□□□□ -0.38
CDC27-206ENST00000528748 COA7Q96BR5 231 aa12.65□□□□□ -0.38
CDC27-206ENST00000528748 TRIM47Q96LD4 638 aa12.65□□□□□ -0.38
CDC27-206ENST00000528748 LLPHQ9BRT6 129 aaKnown RBP12.65□□□□□ -0.38
CDC27-206ENST00000528748 SLC26A6Q9BXS9 759 aa12.65□□□□□ -0.38
CDC27-206ENST00000528748 RNF146Q9NTX7 359 aa12.65□□□□□ -0.38
CDC27-206ENST00000528748 FBXO40Q9UH90 709 aa12.65□□□□□ -0.38
CDC27-206ENST00000528748 GJD2Q9UKL4 321 aa12.65□□□□□ -0.38
CDC27-206ENST00000528748 PCDHGC3Q9UN70 934 aa12.65□□□□□ -0.38
CDC27-206ENST00000528748 MRPL11Q9Y3B7 192 aaKnown RBP12.65□□□□□ -0.38
CDC27-206ENST00000528748 MGAMO43451 1857 aa12.65□□□□□ -0.38
CDC27-206ENST00000528748 SLC15A5A6NIM6 579 aa12.64□□□□□ -0.39
CDC27-206ENST00000528748 TNPO2O14787 897 aaKnown RBP12.64□□□□□ -0.39
CDC27-206ENST00000528748 GNRH1P01148 92 aa12.64□□□□□ -0.39
CDC27-206ENST00000528748 FCER1AP12319 257 aa12.64□□□□□ -0.39
CDC27-206ENST00000528748 HOXD10P28358 340 aa12.64□□□□□ -0.39
CDC27-206ENST00000528748 ABRAQ8N0Z2 381 aa12.64□□□□□ -0.39
CDC27-206ENST00000528748 RGS22Q8NE09 1264 aa12.64□□□□□ -0.39
CDC27-206ENST00000528748 NSUN7Q8NE18 718 aaKnown RBP12.64□□□□□ -0.39
CDC27-206ENST00000528748 ACAD9Q9H845 621 aa12.64□□□□□ -0.39
CDC27-206ENST00000528748 CWC22Q9HCG8 908 aaKnown RBP12.64□□□□□ -0.39
CDC27-206ENST00000528748 HOMER2Q9NSB8 354 aa12.64□□□□□ -0.39
CDC27-206ENST00000528748 PCNTO95613 3336 aa12.64□□□□□ -0.39
CDC27-206ENST00000528748 DTNBO60941 627 aa12.63□□□□□ -0.39
CDC27-206ENST00000528748 DEXIO95424 95 aa12.63□□□□□ -0.39
CDC27-206ENST00000528748 SCG2P13521 617 aa12.63□□□□□ -0.39
CDC27-206ENST00000528748 FDPSP14324 419 aaKnown RBP12.63□□□□□ -0.39
CDC27-206ENST00000528748 WWC2Q6AWC2 1192 aa12.63□□□□□ -0.39
CDC27-206ENST00000528748 SMARCC2Q8TAQ2 1214 aa12.63□□□□□ -0.39
CDC27-206ENST00000528748 TBC1D5Q92609 795 aa12.63□□□□□ -0.39
CDC27-206ENST00000528748 USP6NLQ92738 828 aa12.63□□□□□ -0.39
CDC27-206ENST00000528748 MMP19Q99542 508 aa12.63□□□□□ -0.39
CDC27-206ENST00000528748 NUDT12Q9BQG2 462 aa12.63□□□□□ -0.39
CDC27-206ENST00000528748 MAF1Q9H063 256 aa12.63□□□□□ -0.39
CDC27-206ENST00000528748 PRDM10Q9NQV6 1147 aa12.63□□□□□ -0.39
CDC27-206ENST00000528748 BARHL2Q9NY43 387 aa12.63□□□□□ -0.39
CDC27-206ENST00000528748 ORC3Q9UBD5 711 aaPredicted RBP12.63□□□□□ -0.39
CDC27-206ENST00000528748 IVNS1ABPQ9Y6Y0 642 aa12.63□□□□□ -0.39
CDC27-206ENST00000528748 STK36Q9NRP7 1315 aa12.62□□□□□ -0.39
CDC27-206ENST00000528748 PTPDC1A2A3K4 754 aa12.62□□□□□ -0.39
CDC27-206ENST00000528748 hCG_1984214I3L0E3 225 aa12.62□□□□□ -0.39
CDC27-206ENST00000528748 K7ELQ4 463 aaPredicted RBP12.62□□□□□ -0.39
CDC27-206ENST00000528748 NFIBO00712 420 aa12.62□□□□□ -0.39
CDC27-206ENST00000528748 OPLAHO14841 1288 aa12.62□□□□□ -0.39
CDC27-206ENST00000528748 JAK2O60674 1132 aa12.62□□□□□ -0.39
CDC27-206ENST00000528748 JUNDP17535 347 aa12.62□□□□□ -0.39
CDC27-206ENST00000528748 CUL4AQ13619 759 aa12.62□□□□□ -0.39
CDC27-206ENST00000528748 BAATQ14032 418 aaPredicted RBP12.62□□□□□ -0.39
CDC27-206ENST00000528748 GRB14Q14449 540 aa12.62□□□□□ -0.39
CDC27-206ENST00000528748 KCTD2Q14681 263 aa12.62□□□□□ -0.39
CDC27-206ENST00000528748 OTOP1Q7RTM1 612 aa12.62□□□□□ -0.39
CDC27-206ENST00000528748 HEATR3Q7Z4Q2 680 aa12.62□□□□□ -0.39
CDC27-206ENST00000528748 MCF2L2Q86YR7 1114 aa12.62□□□□□ -0.39
CDC27-206ENST00000528748 ANKRD35Q8N283 1001 aa12.62□□□□□ -0.39
CDC27-206ENST00000528748 SAMD3Q8N6K7 520 aa12.62□□□□□ -0.39
CDC27-206ENST00000528748 ZNF713Q8N859 430 aaPredicted RBP12.62□□□□□ -0.39
CDC27-206ENST00000528748 GPKOWQ92917 476 aaPredicted RBP eCLIP12.62□□□□□ -0.39
CDC27-206ENST00000528748 DDX11Q96FC9 970 aa12.62□□□□□ -0.39
CDC27-206ENST00000528748 A1CFQ9NQ94 594 aaKnown RBP12.62□□□□□ -0.39
CDC27-206ENST00000528748 SRRDQ9UH36 339 aa12.62□□□□□ -0.39
CDC27-206ENST00000528748 GABRQQ9UN88 632 aa12.62□□□□□ -0.39
CDC27-206ENST00000528748 ZSWIM8A7E2V4 1837 aa12.61□□□□□ -0.39
CDC27-206ENST00000528748 DNAJC25-GNG10A0A024R161 153 aa12.61□□□□□ -0.39
CDC27-206ENST00000528748 STXBP3O00186 592 aa12.61□□□□□ -0.39
CDC27-206ENST00000528748 COBLO75128 1261 aa12.61□□□□□ -0.39
CDC27-206ENST00000528748 ADORA2AP29274 412 aa12.61□□□□□ -0.39
CDC27-206ENST00000528748 FLT3LGP49771 235 aa12.61□□□□□ -0.39
CDC27-206ENST00000528748 PRMT2P55345 433 aa12.61□□□□□ -0.39
CDC27-206ENST00000528748 PRR20EP86478 221 aa12.61□□□□□ -0.39
CDC27-206ENST00000528748 PRR20CP86479 221 aa12.61□□□□□ -0.39
CDC27-206ENST00000528748 PRR20DP86480 221 aa12.61□□□□□ -0.39
CDC27-206ENST00000528748 PRR20BP86481 221 aa12.61□□□□□ -0.39
CDC27-206ENST00000528748 PRR20AP86496 221 aa12.61□□□□□ -0.39
CDC27-206ENST00000528748 GHRHRQ02643 423 aa12.61□□□□□ -0.39
CDC27-206ENST00000528748 NSMFQ6X4W1 530 aa12.61□□□□□ -0.39
CDC27-206ENST00000528748 RNF207Q6ZRF8 634 aa12.61□□□□□ -0.39
CDC27-206ENST00000528748 DPP9Q86TI2 863 aa12.61□□□□□ -0.39
CDC27-206ENST00000528748 WASF1Q92558 559 aa12.61□□□□□ -0.39
CDC27-206ENST00000528748 PSTPIP2Q9H939 334 aa12.61□□□□□ -0.39
CDC27-206ENST00000528748 SH3GLB2Q9NR46 395 aa12.61□□□□□ -0.39
CDC27-206ENST00000528748 MAP3K20Q9NYL2 800 aaKnown RBP12.61□□□□□ -0.39
CDC27-206ENST00000528748 CYP39A1Q9NYL5 469 aa12.61□□□□□ -0.39
CDC27-206ENST00000528748 TRIM17Q9Y577 477 aa12.61□□□□□ -0.39
CDC27-206ENST00000528748 PFASO15067 1338 aa12.61□□□□□ -0.39
CDC27-206ENST00000528748 PLXNB2O15031 1838 aa12.6□□□□□ -0.39
CDC27-206ENST00000528748 SMCO2A6NFE2 343 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms