RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 CTAGE1Q96RT6 745 aa18.08■□□□□ 0.48
CLNS1A-210ENST00000528364 GAS2L1Q99501 681 aaPredicted RBP18.08■□□□□ 0.48
CLNS1A-210ENST00000528364 MAF1Q9H063 256 aa18.08■□□□□ 0.48
CLNS1A-210ENST00000528364 SLC28A3Q9HAS3 691 aa18.08■□□□□ 0.48
CLNS1A-210ENST00000528364 PXMP2Q9NR77 195 aa18.08■□□□□ 0.48
CLNS1A-210ENST00000528364 EIF3JO75822 258 aaKnown RBP18.07■□□□□ 0.48
CLNS1A-210ENST00000528364 RGS20O76081 388 aa18.07■□□□□ 0.48
CLNS1A-210ENST00000528364 MYCLP12524 364 aaPredicted RBP18.07■□□□□ 0.48
CLNS1A-210ENST00000528364 ATP2A2P16615 1042 aaKnown RBP18.07■□□□□ 0.48
CLNS1A-210ENST00000528364 IGFBP4P22692 258 aa18.07■□□□□ 0.48
CLNS1A-210ENST00000528364 HSD17B4P51659 736 aa18.07■□□□□ 0.48
CLNS1A-210ENST00000528364 PTPN11Q06124 597 aaPredicted RBP18.07■□□□□ 0.48
CLNS1A-210ENST00000528364 PTGISQ16647 500 aa18.07■□□□□ 0.48
CLNS1A-210ENST00000528364 GDF6Q6KF10 455 aaPredicted RBP18.07■□□□□ 0.48
CLNS1A-210ENST00000528364 STOX1Q6ZVD7 989 aa18.07■□□□□ 0.48
CLNS1A-210ENST00000528364 RETREG2Q8NC44 543 aa18.07■□□□□ 0.48
CLNS1A-210ENST00000528364 PIGSQ96S52 555 aa18.07■□□□□ 0.48
CLNS1A-210ENST00000528364 PCDHA1Q9Y5I3 950 aa18.07■□□□□ 0.48
CLNS1A-210ENST00000528364 EYSQ5T1H1 3165 aa18.07■□□□□ 0.48
CLNS1A-210ENST00000528364 MYH7BA7E2Y1 1941 aa18.06■□□□□ 0.48
CLNS1A-210ENST00000528364 KIAA1217Q5T5P2 1943 aa18.06■□□□□ 0.48
CLNS1A-210ENST00000528364 IFIT3O14879 490 aaKnown RBP18.06■□□□□ 0.48
CLNS1A-210ENST00000528364 ZBTB5O15062 677 aa18.06■□□□□ 0.48
CLNS1A-210ENST00000528364 TRDNQ13061 729 aa18.06■□□□□ 0.48
CLNS1A-210ENST00000528364 GRM4Q14833 912 aa18.06■□□□□ 0.48
CLNS1A-210ENST00000528364 HOMER1Q86YM7 354 aa18.06■□□□□ 0.48
CLNS1A-210ENST00000528364 ALG1Q9BT22 464 aa18.06■□□□□ 0.48
CLNS1A-210ENST00000528364 FTOQ9C0B1 505 aaKnown RBP eCLIP18.06■□□□□ 0.48
CLNS1A-210ENST00000528364 NOD1Q9Y239 953 aa18.06■□□□□ 0.48
CLNS1A-210ENST00000528364 CHD9Q3L8U1 2897 aa18.06■□□□□ 0.48
CLNS1A-210ENST00000528364 E7EWF7 191 aa18.05■□□□□ 0.48
CLNS1A-210ENST00000528364 RFXAPO00287 272 aa18.05■□□□□ 0.48
CLNS1A-210ENST00000528364 CYTH3O43739 400 aa18.05■□□□□ 0.48
CLNS1A-210ENST00000528364 CASTP20810 708 aaKnown RBP18.05■□□□□ 0.48
CLNS1A-210ENST00000528364 GPNMBQ14956 572 aa18.05■□□□□ 0.48
CLNS1A-210ENST00000528364 IL31RAQ8NI17 732 aa18.05■□□□□ 0.48
CLNS1A-210ENST00000528364 RUFY2Q8WXA3 655 aa18.05■□□□□ 0.48
CLNS1A-210ENST00000528364 DHX38Q92620 1227 aaKnown RBP18.05■□□□□ 0.48
CLNS1A-210ENST00000528364 GPKOWQ92917 476 aaPredicted RBP eCLIP18.05■□□□□ 0.48
CLNS1A-210ENST00000528364 PDCD2LQ9BRP1 358 aa18.05■□□□□ 0.48
CLNS1A-210ENST00000528364 HDAC6Q9UBN7 1215 aa18.05■□□□□ 0.48
CLNS1A-210ENST00000528364 PCDHA11Q9Y5I1 949 aa18.05■□□□□ 0.48
CLNS1A-210ENST00000528364 MRVI1Q9Y6F6 885 aa18.05■□□□□ 0.48
CLNS1A-210ENST00000528364 U3KPZ7 1027 aaPredicted RBP18.05■□□□□ 0.48
CLNS1A-210ENST00000528364 PITPNM1O00562 1244 aa18.04■□□□□ 0.48
CLNS1A-210ENST00000528364 PFKMP08237 780 aa18.04■□□□□ 0.48
CLNS1A-210ENST00000528364 PSEN2P49810 448 aa18.04■□□□□ 0.48
CLNS1A-210ENST00000528364 ZNF200P98182 395 aaPredicted RBP18.04■□□□□ 0.48
CLNS1A-210ENST00000528364 GHRHRQ02643 423 aa18.04■□□□□ 0.48
CLNS1A-210ENST00000528364 BFSP2Q13515 415 aa18.04■□□□□ 0.48
CLNS1A-210ENST00000528364 DGKDQ16760 1214 aa18.04■□□□□ 0.48
CLNS1A-210ENST00000528364 PPP2R2DQ66LE6 453 aa18.04■□□□□ 0.48
CLNS1A-210ENST00000528364 FCHSD1Q86WN1 690 aa18.04■□□□□ 0.48
CLNS1A-210ENST00000528364 PIBF1Q8WXW3 757 aa18.04■□□□□ 0.48
CLNS1A-210ENST00000528364 BCAS3Q9H6U6 928 aa18.04■□□□□ 0.48
CLNS1A-210ENST00000528364 RIOX1Q9H6W3 641 aa18.04■□□□□ 0.48
CLNS1A-210ENST00000528364 CERS4Q9HA82 394 aa18.04■□□□□ 0.48
CLNS1A-210ENST00000528364 SGSM2O43147 1006 aa18.03■□□□□ 0.48
CLNS1A-210ENST00000528364 ARHGEF15O94989 841 aa18.03■□□□□ 0.48
CLNS1A-210ENST00000528364 ZNF286BP0CG31 522 aa18.03■□□□□ 0.48
CLNS1A-210ENST00000528364 RFC2P35250 354 aa18.03■□□□□ 0.48
CLNS1A-210ENST00000528364 ANTXR2P58335 489 aa18.03■□□□□ 0.48
CLNS1A-210ENST00000528364 SP2Q02086 613 aa18.03■□□□□ 0.48
CLNS1A-210ENST00000528364 TROAPQ12815 778 aa18.03■□□□□ 0.48
CLNS1A-210ENST00000528364 LAMC2Q13753 1193 aa18.03■□□□□ 0.48
CLNS1A-210ENST00000528364 WTAPQ15007 396 aa18.03■□□□□ 0.48
CLNS1A-210ENST00000528364 PGM5Q15124 567 aa18.03■□□□□ 0.48
CLNS1A-210ENST00000528364 VSIG10LQ86VR7 867 aa18.03■□□□□ 0.48
CLNS1A-210ENST00000528364 DHX37Q8IY37 1157 aaKnown RBP18.03■□□□□ 0.48
CLNS1A-210ENST00000528364 CA3P07451 260 aa18.02■□□□□ 0.48
CLNS1A-210ENST00000528364 ACTN1P12814 892 aa18.02■□□□□ 0.48
CLNS1A-210ENST00000528364 HIC1Q14526 733 aa18.02■□□□□ 0.48
CLNS1A-210ENST00000528364 TCTN1Q2MV58 587 aa18.02■□□□□ 0.48
CLNS1A-210ENST00000528364 TMEM67Q5HYA8 995 aa18.02■□□□□ 0.48
CLNS1A-210ENST00000528364 MYSM1Q5VVJ2 828 aa18.02■□□□□ 0.48
CLNS1A-210ENST00000528364 SESTD1Q86VW0 696 aa18.02■□□□□ 0.48
CLNS1A-210ENST00000528364 NCOA7Q8NI08 942 aa18.02■□□□□ 0.48
CLNS1A-210ENST00000528364 IGDCC4Q8TDY8 1250 aa18.02■□□□□ 0.48
CLNS1A-210ENST00000528364 EMID1Q96A84 441 aaPredicted RBP18.02■□□□□ 0.48
CLNS1A-210ENST00000528364 GTF2IRD1Q9UHL9 959 aa18.02■□□□□ 0.48
CLNS1A-210ENST00000528364 PRRC2BQ5JSZ5 2229 aaKnown RBP18.01■□□□□ 0.47
CLNS1A-210ENST00000528364 PNMA6FA0A0J9YX94 578 aa18.01■□□□□ 0.47
CLNS1A-210ENST00000528364 ERICH2A1L162 156 aa18.01■□□□□ 0.47
CLNS1A-210ENST00000528364 GCOM1H8Y6P7 765 aaPredicted RBP18.01■□□□□ 0.47
CLNS1A-210ENST00000528364 HAS3O00219 553 aa18.01■□□□□ 0.47
CLNS1A-210ENST00000528364 POLR2MP0CAP2 368 aa18.01■□□□□ 0.47
CLNS1A-210ENST00000528364 COL9A3Q14050 684 aaPredicted RBP18.01■□□□□ 0.47
CLNS1A-210ENST00000528364 MFSD10Q14728 455 aa18.01■□□□□ 0.47
CLNS1A-210ENST00000528364 KIAA0753Q2KHM9 967 aa18.01■□□□□ 0.47
CLNS1A-210ENST00000528364 CELF3Q5SZQ8 465 aaKnown RBP18.01■□□□□ 0.47
CLNS1A-210ENST00000528364 TMCO2Q7Z6W1 182 aaPredicted RBP18.01■□□□□ 0.47
CLNS1A-210ENST00000528364 RALYLQ86SE5 291 aaKnown RBP18.01■□□□□ 0.47
CLNS1A-210ENST00000528364 C7orf31Q8N865 590 aa18.01■□□□□ 0.47
CLNS1A-210ENST00000528364 PPTC7Q8NI37 304 aa18.01■□□□□ 0.47
CLNS1A-210ENST00000528364 MAP4K1Q92918 833 aa18.01■□□□□ 0.47
CLNS1A-210ENST00000528364 WNT8BQ93098 351 aa18.01■□□□□ 0.47
CLNS1A-210ENST00000528364 MAP3K20Q9NYL2 800 aaKnown RBP18.01■□□□□ 0.47
CLNS1A-210ENST00000528364 EPOPA6NHQ4 379 aa18■□□□□ 0.47
CLNS1A-210ENST00000528364 GGPS1O95749 300 aa18■□□□□ 0.47
CLNS1A-210ENST00000528364 SELPP16109 830 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms