RNA–Protein interactions for RNA: ENST00000528201.1

PACSIN3-204, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 864 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-204ENST00000528201 FCHSD1Q86WN1 690 aa27.72■■■□□ 2.03
PACSIN3-204ENST00000528201 TMEM199Q8N511 208 aa27.72■■■□□ 2.03
PACSIN3-204ENST00000528201 SAMD3Q8N6K7 520 aa27.72■■■□□ 2.03
PACSIN3-204ENST00000528201 CDH23Q9H251 3354 aa27.71■■■□□ 2.03
PACSIN3-204ENST00000528201 MMP3P08254 477 aa27.71■■■□□ 2.03
PACSIN3-204ENST00000528201 CYP2C9P11712 490 aa27.71■■■□□ 2.03
PACSIN3-204ENST00000528201 KIF5BP33176 963 aa27.71■■■□□ 2.03
PACSIN3-204ENST00000528201 CCL23P55773 120 aa27.71■■■□□ 2.03
PACSIN3-204ENST00000528201 BRDTQ58F21 947 aaPredicted RBP27.71■■■□□ 2.03
PACSIN3-204ENST00000528201 VWCEQ96DN2 955 aa27.71■■■□□ 2.03
PACSIN3-204ENST00000528201 CCDC136Q96JN2 1154 aa27.71■■■□□ 2.03
PACSIN3-204ENST00000528201 MRVI1Q9Y6F6 885 aa27.71■■■□□ 2.03
PACSIN3-204ENST00000528201 CCDC69A6NI79 296 aa27.7■■■□□ 2.02
PACSIN3-204ENST00000528201 KPNA6O60684 536 aa27.7■■■□□ 2.02
PACSIN3-204ENST00000528201 RASIP1Q5U651 963 aa27.7■■■□□ 2.02
PACSIN3-204ENST00000528201 ZNF365Q70YC5 407 aa27.7■■■□□ 2.02
PACSIN3-204ENST00000528201 TMTC2Q8N394 836 aa27.7■■■□□ 2.02
PACSIN3-204ENST00000528201 KAT2BQ92831 832 aa27.7■■■□□ 2.02
PACSIN3-204ENST00000528201 GPKOWQ92917 476 aaPredicted RBP eCLIP27.7■■■□□ 2.02
PACSIN3-204ENST00000528201 TCEANC2Q96MN5 208 aa27.7■■■□□ 2.02
PACSIN3-204ENST00000528201 MYH6P13533 1939 aa27.7■■■□□ 2.02
PACSIN3-204ENST00000528201 SMARCA1P28370 1054 aa27.69■■■□□ 2.02
PACSIN3-204ENST00000528201 TRAF1Q13077 416 aa27.69■■■□□ 2.02
PACSIN3-204ENST00000528201 ADCK5Q3MIX3 580 aa27.69■■■□□ 2.02
PACSIN3-204ENST00000528201 FAM47CQ5HY64 1035 aa27.69■■■□□ 2.02
PACSIN3-204ENST00000528201 RRP36Q96EU6 259 aaKnown RBP27.69■■■□□ 2.02
PACSIN3-204ENST00000528201 TTYH1Q9H313 450 aaPredicted RBP27.69■■■□□ 2.02
PACSIN3-204ENST00000528201 SCN10AQ9Y5Y9 1956 aa27.69■■■□□ 2.02
PACSIN3-204ENST00000528201 NFRKBQ6P4R8 1299 aa27.68■■■□□ 2.02
PACSIN3-204ENST00000528201 SGMS1Q86VZ5 419 aa27.68■■■□□ 2.02
PACSIN3-204ENST00000528201 EMID1Q96A84 441 aaPredicted RBP27.68■■■□□ 2.02
PACSIN3-204ENST00000528201 IL23AQ9NPF7 189 aa27.68■■■□□ 2.02
PACSIN3-204ENST00000528201 STXBP5LQ9Y2K9 1186 aa27.68■■■□□ 2.02
PACSIN3-204ENST00000528201 SLC12A7Q9Y666 1083 aa27.68■■■□□ 2.02
PACSIN3-204ENST00000528201 FRMPD4Q14CM0 1322 aa27.67■■■□□ 2.02
PACSIN3-204ENST00000528201 hCG_1642624A0A1W2PR95 340 aa27.67■■■□□ 2.02
PACSIN3-204ENST00000528201 SORBS3O60504 671 aa27.67■■■□□ 2.02
PACSIN3-204ENST00000528201 EXOSC10Q01780 885 aaKnown RBP27.67■■■□□ 2.02
PACSIN3-204ENST00000528201 SP2Q02086 613 aa27.67■■■□□ 2.02
PACSIN3-204ENST00000528201 ZNF697Q5TEC3 545 aa27.67■■■□□ 2.02
PACSIN3-204ENST00000528201 RNF20Q5VTR2 975 aa27.67■■■□□ 2.02
PACSIN3-204ENST00000528201 SCLYQ96I15 445 aa27.67■■■□□ 2.02
PACSIN3-204ENST00000528201 NEK1Q96PY6 1258 aa27.67■■■□□ 2.02
PACSIN3-204ENST00000528201 LZTS2Q9BRK4 669 aa27.67■■■□□ 2.02
PACSIN3-204ENST00000528201 CCND2P30279 289 aa27.66■■■□□ 2.02
PACSIN3-204ENST00000528201 GNAQP50148 359 aa27.66■■■□□ 2.02
PACSIN3-204ENST00000528201 CHMP4BP1P59074 171 aa27.66■■■□□ 2.02
PACSIN3-204ENST00000528201 MRPS9P82933 396 aaKnown RBP27.66■■■□□ 2.02
PACSIN3-204ENST00000528201 TSGA10IPQ3SY00 556 aa27.66■■■□□ 2.02
PACSIN3-204ENST00000528201 USP17L6PQ6QN14 398 aa27.66■■■□□ 2.02
PACSIN3-204ENST00000528201 TMTC3Q6ZXV5 915 aa27.66■■■□□ 2.02
PACSIN3-204ENST00000528201 MICU3Q86XE3 530 aa27.66■■■□□ 2.02
PACSIN3-204ENST00000528201 CTAGE1Q96RT6 745 aa27.66■■■□□ 2.02
PACSIN3-204ENST00000528201 SEMA6BQ9H3T3 888 aa27.66■■■□□ 2.02
PACSIN3-204ENST00000528201 CXXC1Q9P0U4 656 aaPredicted RBP27.66■■■□□ 2.02
PACSIN3-204ENST00000528201 SUPT20HL2P0C7V6 817 aa27.65■■■□□ 2.02
PACSIN3-204ENST00000528201 PSRC1Q6PGN9 363 aaPredicted RBP27.65■■■□□ 2.02
PACSIN3-204ENST00000528201 CCDC82Q8N4S0 544 aa27.65■■■□□ 2.02
PACSIN3-204ENST00000528201 FANCBQ8NB91 859 aa27.65■■■□□ 2.02
PACSIN3-204ENST00000528201 PPTC7Q8NI37 304 aa27.65■■■□□ 2.02
PACSIN3-204ENST00000528201 BCAS3Q9H6U6 928 aa27.65■■■□□ 2.02
PACSIN3-204ENST00000528201 BRPF3Q9ULD4 1205 aa27.65■■■□□ 2.02
PACSIN3-204ENST00000528201 GRXCR1A8MXD5 290 aa27.64■■■□□ 2.02
PACSIN3-204ENST00000528201 MEIS2O14770 477 aa27.64■■■□□ 2.02
PACSIN3-204ENST00000528201 CALM1P0DP23 149 aa27.64■■■□□ 2.02
PACSIN3-204ENST00000528201 CALM2P0DP24 149 aa27.64■■■□□ 2.02
PACSIN3-204ENST00000528201 CALM3P0DP25 149 aa27.64■■■□□ 2.02
PACSIN3-204ENST00000528201 UBA1P22314 1058 aaKnown RBP27.64■■■□□ 2.02
PACSIN3-204ENST00000528201 LAMC2Q13753 1193 aa27.64■■■□□ 2.02
PACSIN3-204ENST00000528201 CELF3Q5SZQ8 465 aaKnown RBP27.64■■■□□ 2.02
PACSIN3-204ENST00000528201 MYSM1Q5VVJ2 828 aa27.64■■■□□ 2.02
PACSIN3-204ENST00000528201 DHX37Q8IY37 1157 aaKnown RBP27.64■■■□□ 2.02
PACSIN3-204ENST00000528201 SEC63Q9UGP8 760 aaKnown RBP27.64■■■□□ 2.02
PACSIN3-204ENST00000528201 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.63■■■□□ 2.01
PACSIN3-204ENST00000528201 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.63■■■□□ 2.01
PACSIN3-204ENST00000528201 ZNF286BP0CG31 522 aa27.63■■■□□ 2.01
PACSIN3-204ENST00000528201 HOXD8P13378 290 aaPredicted RBP27.63■■■□□ 2.01
PACSIN3-204ENST00000528201 CASTP20810 708 aaKnown RBP27.63■■■□□ 2.01
PACSIN3-204ENST00000528201 PTPN11Q06124 597 aaPredicted RBP27.63■■■□□ 2.01
PACSIN3-204ENST00000528201 DGKDQ16760 1214 aa27.63■■■□□ 2.01
PACSIN3-204ENST00000528201 APOA5Q6Q788 366 aa27.63■■■□□ 2.01
PACSIN3-204ENST00000528201 DHX32Q7L7V1 743 aaKnown RBP27.63■■■□□ 2.01
PACSIN3-204ENST00000528201 HERVK_113Q902F9 699 aa27.63■■■□□ 2.01
PACSIN3-204ENST00000528201 GGPS1O95749 300 aa27.62■■■□□ 2.01
PACSIN3-204ENST00000528201 SEMA3FQ13275 785 aa27.62■■■□□ 2.01
PACSIN3-204ENST00000528201 HSDL1Q3SXM5 330 aa27.62■■■□□ 2.01
PACSIN3-204ENST00000528201 GDF6Q6KF10 455 aaPredicted RBP27.62■■■□□ 2.01
PACSIN3-204ENST00000528201 A0A0C4DFX4 3053 aa27.62■■■□□ 2.01
PACSIN3-204ENST00000528201 KIAA1217Q5T5P2 1943 aa27.61■■■□□ 2.01
PACSIN3-204ENST00000528201 PIK3CDO00329 1044 aa27.61■■■□□ 2.01
PACSIN3-204ENST00000528201 CPA1P15085 419 aa27.61■■■□□ 2.01
PACSIN3-204ENST00000528201 DNAJB2P25686 324 aa27.61■■■□□ 2.01
PACSIN3-204ENST00000528201 PBX2P40425 430 aa27.61■■■□□ 2.01
PACSIN3-204ENST00000528201 OTOP2Q7RTS6 562 aa27.61■■■□□ 2.01
PACSIN3-204ENST00000528201 SESTD1Q86VW0 696 aa27.61■■■□□ 2.01
PACSIN3-204ENST00000528201 KCNB2Q92953 911 aa27.61■■■□□ 2.01
PACSIN3-204ENST00000528201 INPP4AQ96PE3 977 aaPredicted RBP27.61■■■□□ 2.01
PACSIN3-204ENST00000528201 CDX2Q99626 313 aaPredicted RBP27.61■■■□□ 2.01
PACSIN3-204ENST00000528201 EYSQ5T1H1 3165 aa27.6■■■□□ 2.01
PACSIN3-204ENST00000528201 RBAK-RBAKDNI3L0D1 243 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms