RNA–Protein interactions for RNA: ENST00000527612.1

PPFIA1-209, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-209ENST00000527612 IWS1Q96ST2 819 aa7.9□□□□□ -1.14
PPFIA1-209ENST00000527612 MPHOSPH6Q99547 160 aaKnown RBP7.9□□□□□ -1.14
PPFIA1-209ENST00000527612 MAP3K14Q99558 947 aa7.9□□□□□ -1.14
PPFIA1-209ENST00000527612 MTG1Q9BT17 334 aaPredicted RBP7.9□□□□□ -1.14
PPFIA1-209ENST00000527612 MTA3Q9BTC8 594 aa7.9□□□□□ -1.14
PPFIA1-209ENST00000527612 HIPK3Q9H422 1215 aa7.9□□□□□ -1.14
PPFIA1-209ENST00000527612 ANO2Q9NQ90 1003 aa7.9□□□□□ -1.14
PPFIA1-209ENST00000527612 POLR3EQ9NVU0 708 aa7.9□□□□□ -1.14
PPFIA1-209ENST00000527612 STXBP5LQ9Y2K9 1186 aa7.9□□□□□ -1.14
PPFIA1-209ENST00000527612 PCDHA1Q9Y5I3 950 aa7.9□□□□□ -1.14
PPFIA1-209ENST00000527612 C5orf42Q9H799 3197 aa7.9□□□□□ -1.14
PPFIA1-209ENST00000527612 NCOR1O75376 2440 aa7.9□□□□□ -1.15
PPFIA1-209ENST00000527612 MYH9P35579 1960 aaKnown RBP7.9□□□□□ -1.15
PPFIA1-209ENST00000527612 COL4A6Q14031 1691 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 NID2Q14112 1375 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 CNTNAP5Q8WYK1 1306 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 ERICH2A1L162 156 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 RBAK-RBAKDNI3L0D1 243 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 ZEB2O60315 1214 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 F2P00734 622 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 NR3C2P08235 984 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 MYL3P08590 195 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 ZNF286BP0CG31 522 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 ACRP10323 421 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 CYP2C9P11712 490 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 UBA1P22314 1058 aaKnown RBP7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 MCM5P33992 734 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 PPIGQ13427 754 aaKnown RBP eCLIP7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 STXBP2Q15833 593 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 NBPF20Q3BBV1 942 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 ZNF697Q5TEC3 545 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 NFRKBQ6P4R8 1299 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 PSRC1Q6PGN9 363 aaPredicted RBP7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 SEPT14Q6ZU15 432 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 CATIPQ7Z7H3 387 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 SGMS1Q86VZ5 419 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 AFG1LQ8WV93 481 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 GPKOWQ92917 476 aaPredicted RBP eCLIP7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 VTI1AQ96AJ9 217 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 FAM161BQ96MY7 647 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 SEZ6LQ9BYH1 1024 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 LRRC2Q9BYS8 371 aa7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 CXXC1Q9P0U4 656 aaPredicted RBP7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 DDX41Q9UJV9 622 aaKnown RBP7.89□□□□□ -1.15
PPFIA1-209ENST00000527612 TMEM265A0A087WTH1 108 aa7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 PNMA6FA0A0J9YX94 578 aa7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 CDC45O75419 566 aa7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 EIF3JO75822 258 aaKnown RBP7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 GH1P01241 217 aa7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 DNAJB2P25686 324 aa7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 LIFRP42702 1097 aa7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 CCL23P55773 120 aa7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 MRPS9P82933 396 aaKnown RBP7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 SEMA3FQ13275 785 aa7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 ADCK5Q3MIX3 580 aa7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 ARHGEF16Q5VV41 709 aa7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 APOA5Q6Q788 366 aa7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 TMTC3Q6ZXV5 915 aa7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 ZNF365Q70YC5 407 aa7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 SESTD1Q86VW0 696 aa7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 MICU3Q86XE3 530 aa7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 RAB11FIP4Q86YS3 637 aa7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 RASEFQ8IZ41 740 aa7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 CMTR1Q8N1G2 835 aaKnown RBP7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 TMEM199Q8N511 208 aa7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 SRBD1Q8N5C6 995 aaKnown RBP7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 PPTC7Q8NI37 304 aa7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 CTCFLQ8NI51 663 aaPredicted RBP7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 DHX38Q92620 1227 aaKnown RBP7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 SCLYQ96I15 445 aa7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 TMEM87BQ96K49 555 aa7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 INPP4AQ96PE3 977 aaPredicted RBP7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 IL23AQ9NPF7 189 aa7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 MAP3K20Q9NYL2 800 aaKnown RBP7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 MRVI1Q9Y6F6 885 aa7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 PRRC2BQ5JSZ5 2229 aaKnown RBP7.88□□□□□ -1.15
PPFIA1-209ENST00000527612 B4DLN1 442 aa7.87□□□□□ -1.15
PPFIA1-209ENST00000527612 GCOM1H8Y6P7 765 aaPredicted RBP7.87□□□□□ -1.15
PPFIA1-209ENST00000527612 HAS3O00219 553 aa7.87□□□□□ -1.15
PPFIA1-209ENST00000527612 PIK3CDO00329 1044 aa7.87□□□□□ -1.15
PPFIA1-209ENST00000527612 PITPNM1O00562 1244 aa7.87□□□□□ -1.15
PPFIA1-209ENST00000527612 MEIS2O14770 477 aa7.87□□□□□ -1.15
PPFIA1-209ENST00000527612 KPNA6O60684 536 aa7.87□□□□□ -1.15
PPFIA1-209ENST00000527612 POLR2MP0CAP2 368 aa7.87□□□□□ -1.15
PPFIA1-209ENST00000527612 SMARCA1P28370 1054 aa7.87□□□□□ -1.15
PPFIA1-209ENST00000527612 HOXC8P31273 242 aa7.87□□□□□ -1.15
PPFIA1-209ENST00000527612 PBX2P40425 430 aa7.87□□□□□ -1.15
PPFIA1-209ENST00000527612 MRPL12P52815 198 aaKnown RBP7.87□□□□□ -1.15
PPFIA1-209ENST00000527612 SP2Q02086 613 aa7.87□□□□□ -1.15
PPFIA1-209ENST00000527612 RBL2Q08999 1139 aa7.87□□□□□ -1.15
PPFIA1-209ENST00000527612 FUT2Q10981 343 aa7.87□□□□□ -1.15
PPFIA1-209ENST00000527612 HIC1Q14526 733 aa7.87□□□□□ -1.15
PPFIA1-209ENST00000527612 HSDL1Q3SXM5 330 aa7.87□□□□□ -1.15
PPFIA1-209ENST00000527612 BRDTQ58F21 947 aaPredicted RBP7.87□□□□□ -1.15
PPFIA1-209ENST00000527612 MYSM1Q5VVJ2 828 aa7.87□□□□□ -1.15
PPFIA1-209ENST00000527612 GDF6Q6KF10 455 aaPredicted RBP7.87□□□□□ -1.15
PPFIA1-209ENST00000527612 TYW1BQ6NUM6 668 aa7.87□□□□□ -1.15
PPFIA1-209ENST00000527612 CASC1Q6TDU7 716 aa7.87□□□□□ -1.15
PPFIA1-209ENST00000527612 VSIG10LQ86VR7 867 aa7.87□□□□□ -1.15
PPFIA1-209ENST00000527612 SAMD3Q8N6K7 520 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms