RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 ZNRF3Q9ULT6 936 aa4.73□□□□□ -1.65
CLNS1A-209ENST00000527299 DIS3Q9Y2L1 958 aaKnown RBP4.73□□□□□ -1.65
CLNS1A-209ENST00000527299 EEA1Q15075 1411 aa4.72□□□□□ -1.65
CLNS1A-209ENST00000527299 C9orf118A6NHY6 69 aa4.72□□□□□ -1.65
CLNS1A-209ENST00000527299 KIF20AO95235 890 aa4.72□□□□□ -1.65
CLNS1A-209ENST00000527299 TP53P04637 393 aaPredicted RBP4.72□□□□□ -1.65
CLNS1A-209ENST00000527299 TAGLNQ01995 201 aaKnown RBP4.72□□□□□ -1.65
CLNS1A-209ENST00000527299 SLC20A2Q08357 652 aa4.72□□□□□ -1.65
CLNS1A-209ENST00000527299 DMTNQ08495 405 aa4.72□□□□□ -1.65
CLNS1A-209ENST00000527299 KLF10Q13118 480 aa4.72□□□□□ -1.65
CLNS1A-209ENST00000527299 R3HDM1Q15032 1099 aaKnown RBP4.72□□□□□ -1.65
CLNS1A-209ENST00000527299 ETV3LQ6ZN32 361 aa4.72□□□□□ -1.65
CLNS1A-209ENST00000527299 MIB1Q86YT6 1006 aa4.72□□□□□ -1.65
CLNS1A-209ENST00000527299 ZDHHC15Q96MV8 337 aa4.72□□□□□ -1.65
CLNS1A-209ENST00000527299 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.72□□□□□ -1.65
CLNS1A-209ENST00000527299 SIT1Q9Y3P8 196 aa4.72□□□□□ -1.65
CLNS1A-209ENST00000527299 PATL2C9JE40 543 aaKnown RBP4.71□□□□□ -1.66
CLNS1A-209ENST00000527299 DDX3XO00571 662 aaKnown RBP eCLIP4.71□□□□□ -1.66
CLNS1A-209ENST00000527299 GPR42O15529 346 aa4.71□□□□□ -1.66
CLNS1A-209ENST00000527299 CBFA2T2O43439 604 aa4.71□□□□□ -1.66
CLNS1A-209ENST00000527299 IGSF3O75054 1194 aa4.71□□□□□ -1.66
CLNS1A-209ENST00000527299 ITGA1P56199 1179 aa4.71□□□□□ -1.66
CLNS1A-209ENST00000527299 SETQ01105 290 aaPredicted RBP4.71□□□□□ -1.66
CLNS1A-209ENST00000527299 MTERF4Q7Z6M4 381 aaKnown RBP4.71□□□□□ -1.66
CLNS1A-209ENST00000527299 PLEKHH3Q7Z736 793 aa4.71□□□□□ -1.66
CLNS1A-209ENST00000527299 CPNE8Q86YQ8 564 aa4.71□□□□□ -1.66
CLNS1A-209ENST00000527299 FAM26EQ8N5C1 309 aa4.71□□□□□ -1.66
CLNS1A-209ENST00000527299 TM9SF2Q99805 663 aa4.71□□□□□ -1.66
CLNS1A-209ENST00000527299 GGT7Q9UJ14 662 aa4.71□□□□□ -1.66
CLNS1A-209ENST00000527299 HS3ST3A1Q9Y663 406 aa4.71□□□□□ -1.66
CLNS1A-209ENST00000527299 NPEPPSL1A6NEC2 478 aa4.7□□□□□ -1.66
CLNS1A-209ENST00000527299 NTRK1P04629 796 aa4.7□□□□□ -1.66
CLNS1A-209ENST00000527299 TNNT2P45379 298 aaPredicted RBP4.7□□□□□ -1.66
CLNS1A-209ENST00000527299 TERF1P54274 439 aa4.7□□□□□ -1.66
CLNS1A-209ENST00000527299 ZNF585AQ6P3V2 769 aa4.7□□□□□ -1.66
CLNS1A-209ENST00000527299 CD300LDQ6UXZ3 194 aa4.7□□□□□ -1.66
CLNS1A-209ENST00000527299 SND1Q7KZF4 910 aaKnown RBP eCLIP4.7□□□□□ -1.66
CLNS1A-209ENST00000527299 STK32CQ86UX6 486 aa4.7□□□□□ -1.66
CLNS1A-209ENST00000527299 CIR1Q86X95 450 aaPredicted RBP4.7□□□□□ -1.66
CLNS1A-209ENST00000527299 PALM2Q8IXS6 379 aa4.7□□□□□ -1.66
CLNS1A-209ENST00000527299 USP33Q8TEY7 942 aa4.7□□□□□ -1.66
CLNS1A-209ENST00000527299 FRAT1Q92837 279 aaPredicted RBP4.7□□□□□ -1.66
CLNS1A-209ENST00000527299 TRIM44Q96DX7 344 aaPredicted RBP4.7□□□□□ -1.66
CLNS1A-209ENST00000527299 WWC2-AS2Q96NR7 200 aa4.7□□□□□ -1.66
CLNS1A-209ENST00000527299 FAM86C1Q9NVL1 165 aa4.7□□□□□ -1.66
CLNS1A-209ENST00000527299 ING1Q9UK53 422 aaPredicted RBP4.7□□□□□ -1.66
CLNS1A-209ENST00000527299 HDAC5Q9UQL6 1122 aa4.7□□□□□ -1.66
CLNS1A-209ENST00000527299 LTBP3Q9NS15 1303 aa4.7□□□□□ -1.66
CLNS1A-209ENST00000527299 STXBP3O00186 592 aa4.69□□□□□ -1.66
CLNS1A-209ENST00000527299 IMPDH2P12268 514 aa4.69□□□□□ -1.66
CLNS1A-209ENST00000527299 ZNF28P17035 718 aa4.69□□□□□ -1.66
CLNS1A-209ENST00000527299 PPP2R5DQ14738 602 aa4.69□□□□□ -1.66
CLNS1A-209ENST00000527299 TCEAL1Q15170 157 aa4.69□□□□□ -1.66
CLNS1A-209ENST00000527299 ZYXQ15942 572 aaKnown RBP4.69□□□□□ -1.66
CLNS1A-209ENST00000527299 L1TD1Q5T7N2 865 aaKnown RBP4.69□□□□□ -1.66
CLNS1A-209ENST00000527299 UNC5AQ6ZN44 842 aa4.69□□□□□ -1.66
CLNS1A-209ENST00000527299 HS2ST1Q7LGA3 356 aa4.69□□□□□ -1.66
CLNS1A-209ENST00000527299 DCP2Q8IU60 420 aaKnown RBP4.69□□□□□ -1.66
CLNS1A-209ENST00000527299 PLEKHO2Q8TD55 490 aa4.69□□□□□ -1.66
CLNS1A-209ENST00000527299 MBD6Q96DN6 1003 aa4.69□□□□□ -1.66
CLNS1A-209ENST00000527299 DEF6Q9H4E7 631 aa4.69□□□□□ -1.66
CLNS1A-209ENST00000527299 ZNF214Q9UL59 606 aaPredicted RBP4.69□□□□□ -1.66
CLNS1A-209ENST00000527299 TESMINQ9Y4I5 508 aa4.69□□□□□ -1.66
CLNS1A-209ENST00000527299 C7orf72A4D263 438 aa4.68□□□□□ -1.66
CLNS1A-209ENST00000527299 GOLGA6L3A6NEY3 463 aa4.68□□□□□ -1.66
CLNS1A-209ENST00000527299 C2orf71A6NGG8 1288 aa4.68□□□□□ -1.66
CLNS1A-209ENST00000527299 PATE3B3GLJ2 98 aa4.68□□□□□ -1.66
CLNS1A-209ENST00000527299 SGSM2O43147 1006 aa4.68□□□□□ -1.66
CLNS1A-209ENST00000527299 LETM1O95202 739 aaPredicted RBP4.68□□□□□ -1.66
CLNS1A-209ENST00000527299 PAMP19021 973 aa4.68□□□□□ -1.66
CLNS1A-209ENST00000527299 SEPHS1P49903 392 aa4.68□□□□□ -1.66
CLNS1A-209ENST00000527299 EPHB4P54760 987 aa4.68□□□□□ -1.66
CLNS1A-209ENST00000527299 PKN3Q6P5Z2 889 aa4.68□□□□□ -1.66
CLNS1A-209ENST00000527299 ZC3H18Q86VM9 953 aaKnown RBP4.68□□□□□ -1.66
CLNS1A-209ENST00000527299 IGDCC4Q8TDY8 1250 aa4.68□□□□□ -1.66
CLNS1A-209ENST00000527299 PSMD1Q99460 953 aa4.68□□□□□ -1.66
CLNS1A-209ENST00000527299 GTPBP4Q9BZE4 634 aaKnown RBP4.68□□□□□ -1.66
CLNS1A-209ENST00000527299 SEMA4AQ9H3S1 761 aa4.68□□□□□ -1.66
CLNS1A-209ENST00000527299 YY1AP1Q9H869 796 aa4.68□□□□□ -1.66
CLNS1A-209ENST00000527299 WHRNQ9P202 907 aa4.68□□□□□ -1.66
CLNS1A-209ENST00000527299 BACE2Q9Y5Z0 518 aa4.68□□□□□ -1.66
CLNS1A-209ENST00000527299 NCAPD3P42695 1498 aa4.68□□□□□ -1.66
CLNS1A-209ENST00000527299 TRBV23OR9-2A0A075B6M9 112 aa4.67□□□□□ -1.66
CLNS1A-209ENST00000527299 NPHP3-ACAD11A0A0J9YXS1 232 aa4.67□□□□□ -1.66
CLNS1A-209ENST00000527299 CCER2I3L3R5 266 aa4.67□□□□□ -1.66
CLNS1A-209ENST00000527299 NPHS1O60500 1241 aa4.67□□□□□ -1.66
CLNS1A-209ENST00000527299 VAMP4O75379 141 aa4.67□□□□□ -1.66
CLNS1A-209ENST00000527299 FUCA1P04066 466 aa4.67□□□□□ -1.66
CLNS1A-209ENST00000527299 GUCY2CP25092 1073 aa4.67□□□□□ -1.66
CLNS1A-209ENST00000527299 SELENOPP49908 381 aa4.67□□□□□ -1.66
CLNS1A-209ENST00000527299 PPP2CBP62714 309 aa4.67□□□□□ -1.66
CLNS1A-209ENST00000527299 PPP2CAP67775 309 aa4.67□□□□□ -1.66
CLNS1A-209ENST00000527299 ADAM9Q13443 819 aa4.67□□□□□ -1.66
CLNS1A-209ENST00000527299 SPDYAQ5MJ70 313 aa4.67□□□□□ -1.66
CLNS1A-209ENST00000527299 RBBP8NLQ8NC74 664 aaPredicted RBP4.67□□□□□ -1.66
CLNS1A-209ENST00000527299 RNF34Q969K3 372 aa4.67□□□□□ -1.66
CLNS1A-209ENST00000527299 TCAF1Q9Y4C2 921 aa4.67□□□□□ -1.66
CLNS1A-209ENST00000527299 LAS1LQ9Y4W2 734 aaKnown RBP4.67□□□□□ -1.66
CLNS1A-209ENST00000527299 WRNQ14191 1432 aaPredicted RBP eCLIP4.66□□□□□ -1.66
CLNS1A-209ENST00000527299 MUSKO15146 869 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms