RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 APOA5Q6Q788 366 aa18.6■□□□□ 0.57
CTSB-213ENST00000527215 SYNE3Q6ZMZ3 975 aa18.6■□□□□ 0.57
CTSB-213ENST00000527215 TMTC3Q6ZXV5 915 aa18.6■□□□□ 0.57
CTSB-213ENST00000527215 CCDC82Q8N4S0 544 aa18.6■□□□□ 0.57
CTSB-213ENST00000527215 IL31RAQ8NI17 732 aa18.6■□□□□ 0.57
CTSB-213ENST00000527215 MTG1Q9BT17 334 aaPredicted RBP18.6■□□□□ 0.57
CTSB-213ENST00000527215 SEZ6LQ9BYH1 1024 aa18.6■□□□□ 0.57
CTSB-213ENST00000527215 TANC1Q9C0D5 1861 aa18.59■□□□□ 0.57
CTSB-213ENST00000527215 GH1P01241 217 aa18.59■□□□□ 0.57
CTSB-213ENST00000527215 HSPA4P34932 840 aa18.59■□□□□ 0.57
CTSB-213ENST00000527215 EPHB4P54760 987 aa18.59■□□□□ 0.57
CTSB-213ENST00000527215 FPGSQ05932 587 aa18.59■□□□□ 0.57
CTSB-213ENST00000527215 ARHGAP1Q07960 439 aa18.59■□□□□ 0.57
CTSB-213ENST00000527215 KCNB2Q92953 911 aa18.59■□□□□ 0.57
CTSB-213ENST00000527215 PPP1R12CQ9BZL4 782 aa18.59■□□□□ 0.57
CTSB-213ENST00000527215 PPP4R2Q9NY27 417 aa18.59■□□□□ 0.57
CTSB-213ENST00000527215 DDX41Q9UJV9 622 aaKnown RBP18.59■□□□□ 0.57
CTSB-213ENST00000527215 BRPF3Q9ULD4 1205 aa18.59■□□□□ 0.57
CTSB-213ENST00000527215 MRVI1Q9Y6F6 885 aa18.59■□□□□ 0.57
CTSB-213ENST00000527215 SCN5AQ14524 2016 aa18.59■□□□□ 0.57
CTSB-213ENST00000527215 TRIP12Q14669 1992 aaPredicted RBP18.59■□□□□ 0.57
CTSB-213ENST00000527215 hCG_1642624A0A1W2PR95 340 aa18.58■□□□□ 0.56
CTSB-213ENST00000527215 B4GALT4O60513 344 aa18.58■□□□□ 0.56
CTSB-213ENST00000527215 KPNA6O60684 536 aa18.58■□□□□ 0.56
CTSB-213ENST00000527215 RGS20O76081 388 aa18.58■□□□□ 0.56
CTSB-213ENST00000527215 HMGB1P09429 215 aaKnown RBP18.58■□□□□ 0.56
CTSB-213ENST00000527215 CPA1P15085 419 aa18.58■□□□□ 0.56
CTSB-213ENST00000527215 ZNF697Q5TEC3 545 aa18.58■□□□□ 0.56
CTSB-213ENST00000527215 VSIG10LQ86VR7 867 aa18.58■□□□□ 0.56
CTSB-213ENST00000527215 AFG1LQ8WV93 481 aa18.58■□□□□ 0.56
CTSB-213ENST00000527215 ZFP91Q96JP5 570 aaPredicted RBP18.58■□□□□ 0.56
CTSB-213ENST00000527215 TRPV6Q9H1D0 765 aa18.58■□□□□ 0.56
CTSB-213ENST00000527215 SNX14Q9Y5W7 946 aa18.58■□□□□ 0.56
CTSB-213ENST00000527215 FRMPD4Q14CM0 1322 aa18.57■□□□□ 0.56
CTSB-213ENST00000527215 GBF1Q92538 1859 aa18.57■□□□□ 0.56
CTSB-213ENST00000527215 ZBTB43O43298 467 aa18.57■□□□□ 0.56
CTSB-213ENST00000527215 REC8O95072 547 aa18.57■□□□□ 0.56
CTSB-213ENST00000527215 MMP3P08254 477 aa18.57■□□□□ 0.56
CTSB-213ENST00000527215 CCND2P30279 289 aa18.57■□□□□ 0.56
CTSB-213ENST00000527215 MFSD5Q6N075 450 aa18.57■□□□□ 0.56
CTSB-213ENST00000527215 SMARCC2Q8TAQ2 1214 aa18.57■□□□□ 0.56
CTSB-213ENST00000527215 JAKMIP1Q96N16 626 aaKnown RBP18.57■□□□□ 0.56
CTSB-213ENST00000527215 ALDH8A1Q9H2A2 487 aaPredicted RBP18.57■□□□□ 0.56
CTSB-213ENST00000527215 RBM28Q9NW13 759 aaKnown RBP18.57■□□□□ 0.56
CTSB-213ENST00000527215 CNTNAP5Q8WYK1 1306 aa18.56■□□□□ 0.56
CTSB-213ENST00000527215 KLF18A0A0U1RQI7 1052 aa18.56■□□□□ 0.56
CTSB-213ENST00000527215 RTN1Q16799 776 aa18.56■□□□□ 0.56
CTSB-213ENST00000527215 NBPF20Q3BBV1 942 aa18.56■□□□□ 0.56
CTSB-213ENST00000527215 ERICH6BQ5W0A0 696 aa18.56■□□□□ 0.56
CTSB-213ENST00000527215 USP17L6PQ6QN14 398 aa18.56■□□□□ 0.56
CTSB-213ENST00000527215 PPP1R13LQ8WUF5 828 aa18.56■□□□□ 0.56
CTSB-213ENST00000527215 CUL5Q93034 780 aa18.56■□□□□ 0.56
CTSB-213ENST00000527215 UMODL1Q5DID0 1318 aa18.55■□□□□ 0.56
CTSB-213ENST00000527215 GOLGA8AA7E2F4 631 aa18.55■□□□□ 0.56
CTSB-213ENST00000527215 GOLGA8BA8MQT2 603 aa18.55■□□□□ 0.56
CTSB-213ENST00000527215 PIK3CDO00329 1044 aa18.55■□□□□ 0.56
CTSB-213ENST00000527215 DLL1O00548 723 aa18.55■□□□□ 0.56
CTSB-213ENST00000527215 MEIS2O14770 477 aa18.55■□□□□ 0.56
CTSB-213ENST00000527215 CYP2C18P33260 490 aa18.55■□□□□ 0.56
CTSB-213ENST00000527215 FGD1P98174 961 aa18.55■□□□□ 0.56
CTSB-213ENST00000527215 FAM47CQ5HY64 1035 aa18.55■□□□□ 0.56
CTSB-213ENST00000527215 KCNV1Q6PIU1 500 aa18.55■□□□□ 0.56
CTSB-213ENST00000527215 BLOC1S2Q6QNY1 142 aa18.55■□□□□ 0.56
CTSB-213ENST00000527215 Q6ZUG5 572 aa18.55■□□□□ 0.56
CTSB-213ENST00000527215 DHX37Q8IY37 1157 aaKnown RBP18.55■□□□□ 0.56
CTSB-213ENST00000527215 TMEM199Q8N511 208 aa18.55■□□□□ 0.56
CTSB-213ENST00000527215 GPKOWQ92917 476 aaPredicted RBP eCLIP18.55■□□□□ 0.56
CTSB-213ENST00000527215 EMID1Q96A84 441 aaPredicted RBP18.55■□□□□ 0.56
CTSB-213ENST00000527215 HIPK3Q9H422 1215 aa18.55■□□□□ 0.56
CTSB-213ENST00000527215 TRMT13Q9NUP7 481 aaKnown RBP18.55■□□□□ 0.56
CTSB-213ENST00000527215 SORBS3O60504 671 aa18.54■□□□□ 0.56
CTSB-213ENST00000527215 CSF2RAP15509 400 aa18.54■□□□□ 0.56
CTSB-213ENST00000527215 CHMP4BP1P59074 171 aa18.54■□□□□ 0.56
CTSB-213ENST00000527215 MRPS9P82933 396 aaKnown RBP18.54■□□□□ 0.56
CTSB-213ENST00000527215 PPIGQ13427 754 aaKnown RBP eCLIP18.54■□□□□ 0.56
CTSB-213ENST00000527215 LAMC2Q13753 1193 aa18.54■□□□□ 0.56
CTSB-213ENST00000527215 HEATR3Q7Z4Q2 680 aa18.54■□□□□ 0.56
CTSB-213ENST00000527215 RNPC3Q96LT9 517 aaKnown RBP18.54■□□□□ 0.56
CTSB-213ENST00000527215 PSTPIP2Q9H939 334 aa18.54■□□□□ 0.56
CTSB-213ENST00000527215 NAP1L2Q9ULW6 460 aaPredicted RBP18.54■□□□□ 0.56
CTSB-213ENST00000527215 GGPS1O95749 300 aa18.53■□□□□ 0.56
CTSB-213ENST00000527215 CENPBP07199 599 aaPredicted RBP18.53■□□□□ 0.56
CTSB-213ENST00000527215 CASTP20810 708 aaKnown RBP18.53■□□□□ 0.56
CTSB-213ENST00000527215 UBA1P22314 1058 aaKnown RBP18.53■□□□□ 0.56
CTSB-213ENST00000527215 SP2Q02086 613 aa18.53■□□□□ 0.56
CTSB-213ENST00000527215 APOBRQ0VD83 1088 aa18.53■□□□□ 0.56
CTSB-213ENST00000527215 FUT2Q10981 343 aa18.53■□□□□ 0.56
CTSB-213ENST00000527215 DGKDQ16760 1214 aa18.53■□□□□ 0.56
CTSB-213ENST00000527215 NFRKBQ6P4R8 1299 aa18.53■□□□□ 0.56
CTSB-213ENST00000527215 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.53■□□□□ 0.561e-7■■■■■ 39.9
CTSB-213ENST00000527215 NOC4LQ9BVI4 516 aaKnown RBP18.53■□□□□ 0.56
CTSB-213ENST00000527215 STAM2O75886 525 aa18.52■□□□□ 0.56
CTSB-213ENST00000527215 SUPT20HL2P0C7V6 817 aa18.52■□□□□ 0.56
CTSB-213ENST00000527215 TGFB3P10600 412 aa18.52■□□□□ 0.56
CTSB-213ENST00000527215 CYP2C9P11712 490 aa18.52■□□□□ 0.56
CTSB-213ENST00000527215 RPS6KB1P23443 525 aa18.52■□□□□ 0.56
CTSB-213ENST00000527215 CDC27P30260 824 aa18.52■□□□□ 0.56
CTSB-213ENST00000527215 RCAN1P53805 252 aa18.52■□□□□ 0.56
CTSB-213ENST00000527215 SMAD3P84022 425 aaKnown RBP18.52■□□□□ 0.56
CTSB-213ENST00000527215 UBE2SQ16763 222 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms